Difference between revisions of "BGIOSGA018407"

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(Created page with "{{IndicaGene| GeneName = BGIOSGA018407| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018407, complete gene.| tag = OSJNBA0...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA018407|
 
GeneName = BGIOSGA018407|

Revision as of 16:20, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA018407

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018407, complete gene.

LocusTag

OSJNBA0037H03.5

Ensembl Transcript ID

BGIOSGA018407-TA

Ensembl Protein ID

BGIOSGA018407-PA

Length

3188

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:12222029..12225216

Sequence Coding Region

12224832..12225216,12224628..12224723,12224441..12224533,12224263..12224348,12223661..12223939
,12223365..12223492,12222081..12222176,12222029..12222032

Genome Context

<gbrowseImage1> name=IndicaChromosome05:12222029..12225216 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:12222029..12225216 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCAGTCGTCGTCTTCCTCTGCCACTAGTAGCTCAACTCGTTGTCTTGCTCGGCTTGGCTTGCGGGCTCCGGTCGTCGTCGGCGGCGGCGGCGGCGGCGAGTGGCCTTGCCGGTGAACGGGTTACATATCTGCCCGGGCAGCCGCCGGTGGACTTCGACATGTACTCCGGCTACGTCACGGTGGACAAGCGGGCGGGGCGGTCGCTGTTCTACTGGCTGCAGGAGGCGCCGGCGGCGGCGCAGCCGGCGCCGCTCGTGCTGTGGCTGAACGGCGGGCCCGGCTGCTCCTCCGTCGCGTACGGCGCGTCGGAGGAGCTCGGCGCCTTCCGCATCCGCCCCGACGGCGCCACCCTCTTCCTCAACGACTACCGGTGGAACAAAGTGGCGAACATCTTGTTCTTGGACTCGCCGGCCGGCGTCGGATTCTCATACACCAACACCACCTCCGACCTCTACGATTCCGGAGACAAGAGAACTGCTCATGATTCCTATAAGTTTCTGGTGAAATGGTTCGAGAAGTTCCCGCAGTATAAATACCGAGATTTCTACATCGCCGGGGAGAGCTACGCAGGGCACTATGTTCCTCAGTTGTCCCAGCTTGTGTACCGTAACAACAAAGGCGTCAAGGAGCCCCTGATCAACTTCAAAGGCTTCATGGTGGGGAACGCCGTGACGGACGACTACCACGACTACATCGGCACGTTCGAGTACTGGTGGAACCACGGGATCATCTCCGACGGCACGTACCGGCTGCTGAACGCGTCGTGCGTGCACGACTCCGGCGAGCACCCGGCACCGGCGTGCCTCGCCGCGCTCAACGCCTCCACGGTGGAGCAGGGCGACATCGACATGTACAGCCTCTACACGCCCACCTGCAACGAGACCTCCACCTCGTCGGCGGCGGCGAGGCAGCGGCGGCTCAAGCAAGGCCACTATCCGTGGATGACAGGGTCGTATGATCCGTGCACGGAGAGATACTCAACGGAGTACTACAACCGGCCGGAAGTGCAGAGGGCGCTCCACGCCAACGTCACTGGCATAAACTACACATGGGCGACGTGCAGTGACATCCTCAACGACAACTGGAGAGATTCGCCAAGGTCCGTGCTTCCTATCTACCATGAGCTTATTGCAGCTGGCCTAAGAATATGGGTCTTCAGATAA</cdnaseq>

Protein Sequence

<aaseq>MASRRLPLPLVAQLVVLLGLACGLRSSSAAAAAASGLAGERVTYLPGQPPVDFDMYSGYVTVDKRAGRSLFYWLQEAPAAAQPAPLVLWLNGGPGCSSVAYGASEELGAFRIRPDGATLFLNDYRWNKVANILFLDSPAGVGFSYTNTTSDLYDSGDKRTAHDSYKFLVKWFEKFPQYKYRDFYIAGESYAGHYVPQLSQLVYRNNKGVKEPLINFKGFMVGNAVTDDYHDYIGTFEYWWNHGIISDGTYRLLNASCVHDSGEHPAPACLAALNASTVEQGDIDMYSLYTPTCNETSTSSAAARQRRLKQGHYPWMTGSYDPCTERYSTEYYNRPEVQRALHANVTGINYTWATCSDILNDNWRDSPRSVLPIYHELIAAGLRIWVFR</aaseq>

Gene Sequence

<dnaseqindica>1..385#494..589#684..776#869..954#1278..1556#1725..1852#3041..3136#3185..3188#ATGGCCAGTCGTCGTCTTCCTCTGCCACTAGTAGCTCAACTCGTTGTCTTGCTCGGCTTGGCTTGCGGGCTCCGGTCGTCGTCGGCGGCGGCGGCGGCGGCGAGTGGCCTTGCCGGTGAACGGGTTACATATCTGCCCGGGCAGCCGCCGGTGGACTTCGACATGTACTCCGGCTACGTCACGGTGGACAAGCGGGCGGGGCGGTCGCTGTTCTACTGGCTGCAGGAGGCGCCGGCGGCGGCGCAGCCGGCGCCGCTCGTGCTGTGGCTGAACGGCGGGCCCGGCTGCTCCTCCGTCGCGTACGGCGCGTCGGAGGAGCTCGGCGCCTTCCGCATCCGCCCCGACGGCGCCACCCTCTTCCTCAACGACTACCGGTGGAACAAAGGTCAGCAAATATATGTATTCAGAGTTGTTCAGAATTCAGGAGATGAAATCATTTCTTGTATGGTATGTAGATGAAATAATTTGTGAAATTTGTTTCAATGGCTGCCAGTGGCGAACATCTTGTTCTTGGACTCGCCGGCCGGCGTCGGATTCTCATACACCAACACCACCTCCGACCTCTACGATTCCGGAGACAAGAGAACTGGTGAATTGCAAAACAATAAACTAGTAATCAATTCTGTTTATGAAATCACTCAAAAGTTATTGGATTTTATATATTATTTTAAAAATTTTTGCAGCTCATGATTCCTATAAGTTTCTGGTGAAATGGTTCGAGAAGTTCCCGCAGTATAAATACCGAGATTTCTACATCGCCGGGGAGAGCTACGCAGGCATTTCATTACTCTGTTTTTTTTTTTTACTCAGTTTTTTTCTGCTTAATTGTTTATGGACTAGGCTATAAATAACAATTTAAATGCTGCAGGGCACTATGTTCCTCAGTTGTCCCAGCTTGTGTACCGTAACAACAAAGGCGTCAAGGAGCCCCTGATCAACTTCAAAGGCTTCATGGTACGTAGTACACATTACATACACCTTCCCTTCCCTTACCATCATTCGCTATATTGAATTGCATGCACTCGTACCAGTAGATAAAGACCAACAAATTCACTTATATACTTTGAGAAATAGAAAAAAATGAAAGTACAAACGGCGACTTTAGGTGTGTTTAGTTCACGCTAAAATTAAAAATTTGGTTGAAATTGGAACGATGTGACGGAAAAGTTGAAAGTTTATGCGTGTAGAAAAATTTTGATGTGAAGAAAAAGTTGAAAGTTTGTGGAAAAAGTTTGAAATTAAACTCGGCCTTTGAATGAATAATTGTACGATTTCAGGTGGGGAACGCCGTGACGGACGACTACCACGACTACATCGGCACGTTCGAGTACTGGTGGAACCACGGGATCATCTCCGACGGCACGTACCGGCTGCTGAACGCGTCGTGCGTGCACGACTCCGGCGAGCACCCGGCACCGGCGTGCCTCGCCGCGCTCAACGCCTCCACGGTGGAGCAGGGCGACATCGACATGTACAGCCTCTACACGCCCACCTGCAACGAGACCTCCACCTCGTCGGCGGCGGCGAGGCAGCGGCGGCTCAAGCAAGGCCACTATGTGCGTTTAATTTTTTTTCTCAATTTTTATATAATGGATTAAACCGGCCTCTACACTCAAGGATGCACACAGCCTTATTTTTCCTCGATTTGTGTTGTTGTTTTCTACTTTATTTTTCTGGAAAGTTTTGTTATGTGAAATGTAAATGTTTTGTGTGTGTATATGCAGCCGTGGATGACAGGGTCGTATGATCCGTGCACGGAGAGATACTCAACGGAGTACTACAACCGGCCGGAAGTGCAGAGGGCGCTCCACGCCAACGTCACTGGCATAAACTACACATGGGCGACGTGCAGGTTAGTTTGTGCATGCATGCATGCCTGCTTGCCAAAAAGTTTAATACCTTTTTTCTTTACATTGACACATGGAAGACACGTACATTCACACGCACGAGAAAACACACATGCTTTAATTACTCGTAGAGACGAAGACCAACGACAAATTCCTCGTCTAAAATTCTACTATTAAAAACACACATGTTCTAATTTTGAACCTGATAGACAAAAGGTCGTGTATATGTGACTTTGTCACCACATCATCGGTGCTTTCCCAAAGTTTCTTACATTTTCAAATGGTCCCACAAATCTGTGGGGTTTCCCCGTTTTTTACTGTACGTGTAGTTGTAGACCATGGAGTTTTAGGCTTTCTCTGTTTTACGCAACAGTACCTTTTAATGCTTTTTTAAGATAACGAAAATATAACTTTGAGTCTCTTTGTCAAATAGGGTTCGTGTAATCATTCACGTTCGTATAATAAATTAATTAGGGTCGGTTTAGAAAGCCCACAAATAAAAGTGAAAAACCTTGCCAGCTAAAAAAGAAATAAACCATCTGCAATTGGAAACAAAGAATCCACGTGGCCATGACAGCTACACAACAAAGAAGTGATGAAGTTTTAGCCTTTTATTGAGTACTTATCTACTCCTATTTCTATTATAAATTTGTTGATTAAACTTTTTGATCTCCAATAGGAATACTCTGACTGAAACTTCCAATGATTGGTCTCTGTTTATTTTTCTTACCCACTCAGTCCCACGAAGACTTTACTTTTAGATTTTTATGTCCAACGTTTGACTATCCGTCTTATTTAATTTTTTTTTAAAAAAAATAAAAAAATAATCATGCATAAAGTATTATTCAAGTTTTATCATCTAATAACAATAAAAATAGTAATTATAAATTTTTTTTAAATAAGATAAAAAGTCAAACGTTGTATAAAAACTGAAAAATGAAGTCTTCGTGAGCCGGAGGAAGTACTACGGTACTAAAAGGATTCTTCTACTTGGTCCTTTTCCATAGCACAACACGTCACAGGAAGCAATCACTTCCTAATTAACTACTCCAGCATAATATAGTAACAAGATTGTGACAGTCTGAAATTTAAAAGAAAATTTTCACGAACATGGTGTTTGTACATAGTAGTACACCAGGTTCATGTGGATAGCTCTGCTCATTTGGCTTGTAAAACTGTTGAGTGTATGGCAGTGACATCCTCAACGACAACTGGAGAGATTCGCCAAGGTCCGTGCTTCCTATCTACCATGAGCTTATTGCAGCTGGCCTAAGAATATGGGTCTTCAGGTCAGTTTCCTGCCCCTTTCTTAACTTATTTATTCTTCATGCTGACAGATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018407