Difference between revisions of "BGIOSGA018933"

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(Created page with "{{IndicaGene| GeneName = BGIOSGA018933| Description = MAP kinase phosphatase| Definition = Oryza sativa Indica Group BGIOSGA018933, complete gene.| tag = OJ1654_B10.15| t...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA018933|
 
GeneName = BGIOSGA018933|

Revision as of 16:23, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA018933

Description

MAP kinase phosphatase

Definition

Oryza sativa Indica Group BGIOSGA018933, complete gene.

LocusTag

OJ1654_B10.15

Ensembl Transcript ID

BGIOSGA018933-TA

Ensembl Protein ID

BGIOSGA018933-PA

Length

2707

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:893173..895879

Sequence Coding Region

894536..895879,893173..893226

Genome Context

<gbrowseImage1> name=IndicaChromosome05:893173..895879 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:893173..895879 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCACCTCACTCACCTTATGCGCCGCTGCATTTAGTACCCAAAATGCTGAACGAACCCTCACCTGCTGCCCTGGACTCTAGGGGTGCATTCATCGTTCATGTGCTCTCATCGATCTATGTTTGGGTTGGAATGAAGTGTGATCAAGTAATGGAGAAGGATGCAAGAGCAGCGGCGTTCCAGGTGGTGAGGTATGAGAAGGTGCAGGGGCATATCAAAGTTGTCAGGGAAGGATTGGAGCTACCAGAATTTTGGGATGCCTTTTCAAGTGCACCTGTTAATTCAGACAGCAATACAAAGATTAGCAAGGATCAGATTGATTCAGCATCCAAGACTGGCCCGGGGAACCGTAGGGTGGAATCTTATGATGCTGATTTTGAGCTTGTATACAAAGCAATCACTGGGGGTGTTGTGCCAGCATTCTCTTCTTCAGGTGCTGGTGATGAGACCCATCTTCCAGCAAGAGAAAGTACCTGGAGTTCACTAAGGCGCAAGTTCATCTCTAGGTCGTTAGCTCGAGTCTATTCAGATTCTGCTTTAATCAGGGACTTGGATCCGCGGGTGGACCGAGTACAACACCTGGCTGCAGAGGCATCAACATCACCACCTTTCCTATCTCCGAGCTCTTTGTCATCAGATTCAAGCATCAGTTCAAAGTATAGTTCAGACTCACCCTCACTGTCACCTTCAACTAGCTCGCCAACATCACTTGGTCTTTCGCCCGCTTCATCTAATTTTTCCCACACTTTGGTGCCATCATCTAGGTCCCCCCTTCACCAATCATCTAACGAGGAACCTTCAAAATCTGGCCTGGGGTCAATACGCTCTCCCTCCAAGACCTCTTCTATAGCAGAAAGAAGAGGAGGGTTTTCATCTCTGAAGTTACCATCATTCCAAAAGGATCTAGTATTACCACCAAGGGTACCGACCAGCCTTCGCAGAGAAGAGGAAGTCACAGATAAGAGTAATAATAATAGTGTAAAACAGCTTACTGGTGTGTGTTGCCCAGAGAAATGCACTGGCAATACTTCAACAGTGCACACTAAAACTGGAATAACTGAGCGTACTGACAGTATCTCAGAGGCTTGCGGTAATTTACAACTATTAGTCTACCGTTGGCCCAGCAAGGAAAAGCTAACTACTTTCACTCGCAAGGATCTTGACCCAAAATCAGTTTTGATTTTTGTTACTCCTGAAGACAGCAGAAGTGAAGCAGTTAAAACGGTACACATTTGGGTAGGAGGTGAATATGAGAGCAGCAAATGTGTTGACACTGTTGATTGGCAGCAAGTTGCTGGTGATTTTTTTCATCTAAAGGAGCTCGGCAATACTCTTCCTGTTAAGGTTTTCAAAGAGCATGAAACGGAGAATCTTTTGGAAGTGCTGAATGCTCGTTAA</cdnaseq>

Protein Sequence

<aaseq>MAPHSPYAPLHLVPKMLNEPSPAALDSRGAFIVHVLSSIYVWVGMKCDQVMEKDARAAAFQVVRYEKVQGHIKVVREGLELPEFWDAFSSAPVNSDSNTKISKDQIDSASKTGPGNRRVESYDADFELVYKAITGGVVPAFSSSGAGDETHLPARESTWSSLRRKFISRSLARVYSDSALIRDLDPRVDRVQHLAAEASTSPPFLSPSSLSSDSSISSKYSSDSPSLSPSTSSPTSLGLSPASSNFSHTLVPSSRSPLHQSSNEEPSKSGLGSIRSPSKTSSIAERRGGFSSLKLPSFQKDLVLPPRVPTSLRREEEVTDKSNNNSVKQLTGVCCPEKCTGNTSTVHTKTGITERTDSISEACGNLQLLVYRWPSKEKLTTFTRKDLDPKSVLIFVTPEDSRSEAVKTVHIWVGGEYESSKCVDTVDWQQVAGDFFHLKELGNTLPVKVFKEHETENLLEVLNAR</aaseq>

Gene Sequence

<dnaseqindica>1..1344#2654..2707#ATGGCACCTCACTCACCTTATGCGCCGCTGCATTTAGTACCCAAAATGCTGAACGAACCCTCACCTGCTGCCCTGGACTCTAGGGGTGCATTCATCGTTCATGTGCTCTCATCGATCTATGTTTGGGTTGGAATGAAGTGTGATCAAGTAATGGAGAAGGATGCAAGAGCAGCGGCGTTCCAGGTGGTGAGGTATGAGAAGGTGCAGGGGCATATCAAAGTTGTCAGGGAAGGATTGGAGCTACCAGAATTTTGGGATGCCTTTTCAAGTGCACCTGTTAATTCAGACAGCAATACAAAGATTAGCAAGGATCAGATTGATTCAGCATCCAAGACTGGCCCGGGGAACCGTAGGGTGGAATCTTATGATGCTGATTTTGAGCTTGTATACAAAGCAATCACTGGGGGTGTTGTGCCAGCATTCTCTTCTTCAGGTGCTGGTGATGAGACCCATCTTCCAGCAAGAGAAAGTACCTGGAGTTCACTAAGGCGCAAGTTCATCTCTAGGTCGTTAGCTCGAGTCTATTCAGATTCTGCTTTAATCAGGGACTTGGATCCGCGGGTGGACCGAGTACAACACCTGGCTGCAGAGGCATCAACATCACCACCTTTCCTATCTCCGAGCTCTTTGTCATCAGATTCAAGCATCAGTTCAAAGTATAGTTCAGACTCACCCTCACTGTCACCTTCAACTAGCTCGCCAACATCACTTGGTCTTTCGCCCGCTTCATCTAATTTTTCCCACACTTTGGTGCCATCATCTAGGTCCCCCCTTCACCAATCATCTAACGAGGAACCTTCAAAATCTGGCCTGGGGTCAATACGCTCTCCCTCCAAGACCTCTTCTATAGCAGAAAGAAGAGGAGGGTTTTCATCTCTGAAGTTACCATCATTCCAAAAGGATCTAGTATTACCACCAAGGGTACCGACCAGCCTTCGCAGAGAAGAGGAAGTCACAGATAAGAGTAATAATAATAGTGTAAAACAGCTTACTGGTGTGTGTTGCCCAGAGAAATGCACTGGCAATACTTCAACAGTGCACACTAAAACTGGAATAACTGAGCGTACTGACAGTATCTCAGAGGCTTGCGGTAATTTACAACTATTAGTCTACCGTTGGCCCAGCAAGGAAAAGCTAACTACTTTCACTCGCAAGGATCTTGACCCAAAATCAGTTTTGATTTTTGTTACTCCTGAAGACAGCAGAAGTGAAGCAGTTAAAACGGTACACATTTGGGTAGGAGGTGAATATGAGAGCAGCAAATGTGTTGACACTGTTGATTGGCAGCAAGTTGCTGGTGATTTTTTTCATCTAAAGGAGCTCGGCAATACTCTTCCTGTTAAGGTGCCTACACTTATACTATACAATATCTATTTTGTTTACTCTACTTTGCTTTTAAAGGTTCAGTGCTAGTTGAATTTTATGCTCTGTAAGAGGTTAGAGAATACTAAATTCTAACTTTACGAAGCTAGTTGAATTTTATATACCGAGGATACTAAATTCTAGCTTTACTACCATCTCAGATAGTTTTCCACCACTGCCGAAACTTTGCTAGCAGCCACCCATTATTTATCATTGCTTTGAGCTCACTGCGCACACTAGTCTGCCTTGAACTCTTTGCCTTTTGCGCGTTGCAGTTATGGACCAAATATTTTAGTGGAATACAGAAATACAGAATCATATGTTATGCTATTACTGTGTAGAAATATTGCAAATAGGTGAACCATTTTGTGGCTCATTGAGAATTATATATTCGGAACATTTTCAATTTGCATAGACTCCAAATATGTTTAAGTCCGATAATTAGTTACTGGACATGGACTTTTTTTCTTTCATTTATGGACCATGACTTCACAATCTTCTCCTAGATTATTGGACCATCTTAGGAATACTACCAATAAGACTGTCCAGCTTATGTAGAGTGCCTAGTGCGGTAGTGCCAGACAACTTTATCAGATATTTTATCCTCTGGATTATATTATGTCATGATTCATGACCATATACCTCTAGTTTTGTAGTATATGCCCATATGAACCTAACAGGCATAGCCATGCGTATACTACAAAACTGATGCGCATATGAACCTAGCAGGCATAACCACGCATTGGTTGACTCTTCTAGCGAGAAGCACATGGTGAATCCTTCCATATCATCTTACAAATGGAATCTATAATTTCTGTTTTCTATGAGGCTTCACATTCCATTCCATCTTCTTGTGAAATAATATTATGTATGAACTGGCATGGTCCGTAAACTTACTGTAGAAAAAAAAAGACTAATACTTCTCTTGATTATTTTTCATATCGGTTTACTGTAGTAGCACATGGAAGTATGGAACTTAGGTTGATGTTTCATTTATTGGGCCACACCACAATTCTGTGCACTTCTGGCATTCACTATAAATCCTCATAAATTTGGCATGAATTGTGTGAACCACTGAACCTTGCCTAGAACTACCTTCTCTTACTTCTACTTGGCTGGTGGTTTCTCCTGTCCTTACAAATGTCACGAATACCAATCAGCATCTGTGGATTTATGTTATAAAGAAATGTTACAAATTCCACACCTAAGTGCAATACTTCTTCATGCCATGCAACATTTTGTTCTGCCTGAAAATTTATAACTGGACACTAATTGGATCGGAATAATGCAGGTTTTCAAAGAGCATGAAACGGAGAATCTTTTGGAAGTGCTGAATGCTCGTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018933