Difference between revisions of "BGIOSGA019343"

From RiceWiki
Jump to: navigation, search
(Created page with "{{IndicaGene| GeneName = BGIOSGA019343| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019343, complete gene.| tag = OSJNBB0...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA019343|
 
GeneName = BGIOSGA019343|

Revision as of 16:25, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA019343

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019343, complete gene.

LocusTag

OSJNBB0115F21.1

Ensembl Transcript ID

BGIOSGA019343-TA

Ensembl Protein ID

BGIOSGA019343-PA

Length

4526

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:6806950..6811475

Sequence Coding Region

6806950..6807022,6807647..6807816,6807889..6807960,6808149..6808299,6808965..6809073
,6809162..6809279,6809470..6809617,6809776..6810024,6810465..6810590
,6810730..6810830,6810984..6811058,6811416..6811475

Genome Context

<gbrowseImage1> name=IndicaChromosome05:6806950..6811475 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:6806950..6811475 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATGCCAACTCCAGTTTAAATGAGCAAAAGTCTGAAGAACTCAAGCTTAAAGCAAATGATGCCTTTAAAGCAAACAAGTTCTCCCTGGCTATAGAGCTCTATAGTCAAGCCATTGAGCTAAACAGTTCAAATGCAGTTTACTGGGCAAACCGTGCATTTGCTCATACAAAGTTAGAGGAATATGGAAGTGCAGTGCAAGATGCTTCAAAAGCAATTGAAATTGATGCTAGATACTCAAAAGGTTACTACCGACGTGGAGCGGCATATCTTGCCATGGGTAAGTTCAAGGAAGCTCTGAAGGATTTTCAACAGGTGAAAAGAATCAGCCCTAATGATCCAGATGCTACTAGGAAATTGAAAGAGTGTGAGAAAGCTGTCCAGAAAATCCGTTTTGAAGAGGCAATTTCTGTAGGGGATGAAGAGAAGCGCTCTGTAGCTGATTCTATTGACTACCGTATCATAGAAGTAGAGCCACAATATACAGGACCAAGAGTTGATGGAGACACAATAACATTAGATTTTGTCAAGGCTATGTTGGATGAGTTTGAGAAACAGAAATGCATACACAAAAGGTACGCCTACCAGATTGTGTTACAAACCGTGCAGCTATTGCGTTCTGTACCTTCGCTTGTTGATGTGAACGTTCCTGATGGAAGTCATTTTACGGTTTGTGGTGATGTGCATGGTCAGTATTTTGACTTGCTCAATATATTTAAGCTCAATGGGCTTCCCTCGGAAGAGAATCCTTACCTCTTCAATGGAGACTTTGTAGACAGAGGATCTTTTTCTGTTGAAGTCATACTCACTCTTTTTGCTTTCAAGTGCCTCTATCCGACAGGTATGTACCTTGCAAGAGGAAACCATGAGAGCAAGAGCATGAATAAGATATATGGTTTTGAGGGAGAAGTGAGGTCGAAGTTGGGAGAAGCATTTATTGAACTATTTGCGGAAGCATTCTGTTGCCTACCCCTTGCTCATGTCATCAACAACAAGGTCTTTGTTGTTCATGGAGGTCTCTTTAGTGTTGATGGTGTTAAGCTTTCAGATATTAGAGCCATCGATCGATTCCGTGAGCCTCCTGAAGAAGGTCTAATGTGTGAAGTATTATGGAGTGATCCTCAGCCTCAACTTGGTAGAGGTCCAAGCAAACGCGGTGTTGGTCTTTCGTTTGGTGCAGATGTGACTAAGAAATTTCTACAAGAAAATAATCTGGACCTTGTTGTTCGATCCCATGAAGTGAAAGATGAAGGCTATGAAATTGAACATGATGGAAAGCTTATAACGGTGTTCTCTGCTCCCAATTATTGCGACCAGATGGGTAACAAGGGTGCATACATTCGGTTCACAGCTCCAGAACTAAAACCAAATATTTCCTCTTTCTCAGCGGTGCCACACCCTGACGTCAAGCCGATGGCCTACGCGAACAACTTCCTCAGGATGTTCCAGTAA</cdnaseq>

Protein Sequence

<aaseq>MDANSSLNEQKSEELKLKANDAFKANKFSLAIELYSQAIELNSSNAVYWANRAFAHTKLEEYGSAVQDASKAIEIDARYSKGYYRRGAAYLAMGKFKEALKDFQQVKRISPNDPDATRKLKECEKAVQKIRFEEAISVGDEEKRSVADSIDYRIIEVEPQYTGPRVDGDTITLDFVKAMLDEFEKQKCIHKRYAYQIVLQTVQLLRSVPSLVDVNVPDGSHFTVCGDVHGQYFDLLNIFKLNGLPSEENPYLFNGDFVDRGSFSVEVILTLFAFKCLYPTGMYLARGNHESKSMNKIYGFEGEVRSKLGEAFIELFAEAFCCLPLAHVINNKVFVVHGGLFSVDGVKLSDIRAIDRFREPPEEGLMCEVLWSDPQPQLGRGPSKRGVGLSFGADVTKKFLQENNLDLVVRSHEVKDEGYEIEHDGKLITVFSAPNYCDQMGNKGAYIRFTAPELKPNISSFSAVPHPDVKPMAYANNFLRMFQ</aaseq>

Gene Sequence

<dnaseqindica>1..73#698..867#940..1011#1200..1350#2016..2124#2213..2330#2521..2668#2827..3075#3516..3641#3781..3881#4035..4109#4467..4526#ATGGATGCCAACTCCAGTTTAAATGAGCAAAAGTCTGAAGAACTCAAGCTTAAAGCAAATGATGCCTTTAAAGGTATGTTAGGATTTGATCCACTTCATGTCCTCATCCTTTATTATGTCAGAACTGCATGTGTTTTTGAGTTGTAATTCAGAGTTTCAAATGTTGACATAAGTGAGTTACATGCTAATAACACTTATTTAGAATACCAATCAACATGAAATTGTAATAGTTGTTGATCAATAAGGCTTTTAGTATTATATCTACTCCCTCCGGTTCCATAATTATGACTTTTGGACAAGGTTGAGGTCAAACAGTTAGAACTTTGACTATCAATAACGTGAAAAATATTTGGTTTGAAGACACTAGAACATGATGCATAGATTATTCTTAAACAGTACTTCAATAAAATTAATTGTTTACATATTTTTTGTATATATTTTAATAGAAAATCATAGTGAAAGATATGTTTTGGAGACCATGTCAGTTGTCCAAAACATCAAGAATTATGTAACGGGAGGGAGTATCTGTTTATGTACTCTAATGTGTTATATTTTATATCCATCTGAGTGGTAGCAGGCTATTGATATTGCCCTCACAAAATAAAAGATTCGGGCTCTCATGCTGTATGCAGCATTTCCCAAAGTTTTCTAAAGGAATATTTCCCTGGTGGATAATCTTTCTATTTATTTTCTGCAGCAAACAAGTTCTCCCTGGCTATAGAGCTCTATAGTCAAGCCATTGAGCTAAACAGTTCAAATGCAGTTTACTGGGCAAACCGTGCATTTGCTCATACAAAGTTAGAGGAATATGGAAGTGCAGTGCAAGATGCTTCAAAAGCAATTGAAATTGATGCTAGATACTCAAAAGTAAGTGATGGTGCCATTTCTTCCTGCCACAGGTTTGCAAGTTCCTATCTTTTACCCTTTTTTTGTTTGTAGGGTTACTACCGACGTGGAGCGGCATATCTTGCCATGGGTAAGTTCAAGGAAGCTCTGAAGGATTTTCAACAGGTGCGCAGTTTGTTTTCCTAGTTTTGTGGTCTCTTCCCAGATTGAGTGATTGAGAATGACTATTTCTAGTCACTTTTCTTGCTTTTCTTGGTGCTGCTTTATATTAATGTTGGTGACCATCTAGGGATAGCAGGAACCACATTATTTTGTTTCATGTGGTACATTAATAAGTCTACTTTTCTTTCTAGGTGAAAAGAATCAGCCCTAATGATCCAGATGCTACTAGGAAATTGAAAGAGTGTGAGAAAGCTGTCCAGAAAATCCGTTTTGAAGAGGCAATTTCTGTAGGGGATGAAGAGAAGCGCTCTGTAGCTGATTCTATTGACTACCGTATCATAGGTATCTGGTGTTTACTTTCTGAACATATTTCCACTCTGCTAGGTCCATGTACTCTTTTTGACAAAGCCAACCTTGGGTATGATTATGGCCTGGATATATTAGTGTTATTTAGTCAAACTTGACGAGTTTGTTTTATTAGTTCATTTTTCGAGTAACCAATGCCATTTGAGGAAAAAAAAATCAGAGGGAGTGTTTGCTAGTCTCATGAAATTCGTACTTCCCTGGATTCCCAGGATAACTGAAAAGTTGTTCTTGATGAGTTTTCCGTTTAGCACTTTTATGAATCTGCTACTTCCAAGCGTATGCATTCTATAATATAAGGACCTAATTGTCTCATGTTACTTCTATGATATTATTTCATTTAAATTTGCAGTACCGATGCCTACAGAAAAGTTGTTCTTGATGAGTTTTCTGTTTAGCACTTTTATGAATCTGCTACTTCCAAGCGGATGCATTCTATAATATAAGGACCTAATTGTCTCATGTTACTTCTATGCTATTGTTTCATTTAAATTTGCAGTACCAATGCCTACAGAGTAGTGTACTATGGCTCTTTCGTATGTTACCTGTGAACATCTCTTTCTGGGTGGATGGCTTTTGTTATTTTCTTAAATATCCCTTGCTTAGTTGACATTGTGGTTAATATTTTTTTTTGTATGTTCCAGAAGTAGAGCCACAATATACAGGACCAAGAGTTGATGGAGACACAATAACATTAGATTTTGTCAAGGCTATGTTGGATGAGTTTGAGAAACAGAAATGCATACACAAAAGGTACACTTTGTACAAGGGACATACCTGAAGTGTTTTCTTTGGTTATATTGGTTCCCCAGGTTGTTTACTACTTAGGTTGATAATGCAGGTACGCCTACCAGATTGTGTTACAAACCGTGCAGCTATTGCGTTCTGTACCTTCGCTTGTTGATGTGAACGTTCCTGATGGAAGTCATTTTACGGTTTGTGGTGATGTGCATGGTCAGGTATTTAAATTTTTTGAATGCATTGCTTTTGTTTTTTTCCTAGTGCTTCTGGGTGTCCCCTTCTTTTTTGAAATGGAAAATGATATTGGTAATTTCACATGCTAAAATTTTAGCTGTCATTTGATTTAGTTTATTACATATTGATATACTGACAGCCTGATCGGAATTGTAATATTTTTTTCCACTGCAGTATTTTGACTTGCTCAATATATTTAAGCTCAATGGGCTTCCCTCGGAAGAGAATCCTTACCTCTTCAATGGAGACTTTGTAGACAGAGGATCTTTTTCTGTTGAAGTCATACTCACTCTTTTTGCTTTCAAGTGCCTCTATCCGACAGGTAACTGCTAGTTTTGATACTTTTCATGAACTAGATATTAGTATGCAATCTGTTACTTTACTAGCTCTTTTATTACATTATTCTAACTTATAATAGATGTATCGATTTTAGTTGTTCATGTAATAAGGTTTCCTTTATACATACCTTGAATGATCCAGGTATGTACCTTGCAAGAGGAAACCATGAGAGCAAGAGCATGAATAAGATATATGGTTTTGAGGGAGAAGTGAGGTCGAAGTTGGGAGAAGCATTTATTGAACTATTTGCGGAAGCATTCTGTTGCCTACCCCTTGCTCATGTCATCAACAACAAGGTCTTTGTTGTTCATGGAGGTCTCTTTAGTGTTGATGGTGTTAAGCTTTCAGATATTAGAGCCATCGATCGATTCCGTGAGCCTCCTGAAGAAGGTAGCTATTTATTTCTTTTCTATTTTGTATGTGCTTGATTTTCAGCAGATTCTAGGTATGATCCACCTTGTCTTTTCCAATTTATCATTGAAGTTCGCTCCCATTTGATTTAGCTATTATGTCTGATCCATCTTGTAATTTGAGTTTTGTTCGATTATTTTGTTGAACAACATGGTACTGATTCTATAACTTGGTCAACTTACTAGCACATGAACTTGGCTATTTTTGCTGATCTATCATCTTTATTTTTCTTGTGAGATGGAATACATTAATGGCCCAGTATCACTTGATTGAACCTCAATTCAAAGTTATGGTCCAAAGTGACATATATTAAGTTATTAACCATTAATTTGCATTATAAGTGTTGGCATATTATTTACCTTGATGCCTTTTTTCCCATGTTAGTTATCTGCCAACATGACTCCTGTTTCTGCTGACAGGTCTAATGTGTGAAGTATTATGGAGTGATCCTCAGCCTCAACTTGGTAGAGGTCCAAGCAAACGCGGTGTTGGTCTTTCGTTTGGTGCAGATGTGACTAAGAAATTTCTACAAGAAAATAATCTGGGTATGAAGTAAAATTTGTTAAAAAGTTTCCGGTTGGAATTGGATCTTTCAAACATCTGTTATTTGTAATAGTGTCGAGAGCTTGTTTTGTTCCCTTGGAAAATTATTTCACTTATTTGATTTGCCTGATGATGTTCCAGACCTTGTTGTTCGATCCCATGAAGTGAAAGATGAAGGCTATGAAATTGAACATGATGGAAAGCTTATAACGGTGTTCTCTGCTCCCAATTATTGCGACCAGGTTTGCGACAATAGAACTATAGTTGGTTGCACAAACTAATAATTGCACCATAAGGATATGGAAGTTGTTTCCTGGTCAATTTTATGCTCCCGATATTCTTCTTAAATATCTAATCATGCCTTTTACATCTTGTGAATTGCGATTTTGATACAGATGGGTAACAAGGGTGCATACATTCGGTTCACAGCTCCAGAACTAAAACCAAATATTTCCTCTTTCTCAGCGGTGGTGAGTACATTACACTATTACTCTATTTCTTGCAACAAGATTAGTATCCCAAGAAATAGAAGACTGTATGTGGCAGTAGTATGTTTTTGTAGGAAGCTGGTCGAGTGCATGTTACACTTGTTACTCGATTCCCCCTCTGGTCTGAATACTCCCTCTGATCTGAAATACTCGTCGTTTCAAACCATAGAAATGACCTGCTCGTAGTTATTTTCTGCTGTCGGAAACGACAGATAATTTTGACACGAGTACTAGTTATGTTTTTGTATGTAGTGTCTACTGTAGTTTTGTGTTTGTCTTGTAAACAGCATAATATGTGATTTCGTTACAACCAAGGTCTTGACTGATTTCATCTTGCAGCCACACCCTGACGTCAAGCCGATGGCCTACGCGAACAACTTCCTCAGGATGTTCCAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019343