Difference between revisions of "BGIOSGA020813"

From RiceWiki
Jump to: navigation, search
(Created page with "{{IndicaGene| GeneName = BGIOSGA020813| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020813, complete gene.| tag = P0523F0...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA020813|
 
GeneName = BGIOSGA020813|

Revision as of 16:33, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA020813

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020813, complete gene.

LocusTag

P0523F01.34

Ensembl Transcript ID

BGIOSGA020813-TA

Ensembl Protein ID

BGIOSGA020813-PA

Length

3193

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:27178841..27182033

Sequence Coding Region

27181711..27182033,27181482..27181507,27181345..27181375,27181120..27181207,27180867..27181012
,27180706..27180750,27180522..27180613,27180080..27180189,27179841..27179996
,27178841..27179140

Genome Context

<gbrowseImage1> name=IndicaChromosome06:27178841..27182033 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:27178841..27182033 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCAACCTTCTACGGCGTCGGCAGCATTGCACTCGCCATGCACGAGGACGATGAGGAGGAAGGGTCTGGGAGGGTCTTTGGGTTCGCCGCCGGCGATCTTGTCCGGCCGGCGGTCGTCACCCAGCAGTTGTTCCCGATGACGGCGGCGGCGGCGGCGGTGGTGCCGGAGTCGACGGAGCAGCGCCACGTTGCCGCCGCCGCCGAGCAGTGGGCCCGGCCGCCATCGAGGAAGACGCGGCGGGGCCCCCGGTCCAGGAGCTCGCAGTATCGCGGTGTCACCTTCTACCGCCGGACCGGCCGCTGGGAGTCCCACATTTGGGATTGTGGGAAGCAGGTGTACTTGGGTGGATTCGATACGGCACAGGCTGCTGCAAGGGCTTATGACCAGGCTGCAATCAAGTTCCGTGGAGTGGAGGCAGACATCAACTTCACCCTGGATGACTACAAGGAGGACATAAAGAAGATGAACAACTTCAGCAAGGAGGAGTTCGTTCAGGTTCTCCGGCGACAGGGCGTCGGCTTCGTCAGGGGGAGCTCGCGGTTCAGAGGTGTCACCCTGCACAAGTGCGGCAAATGGGAGGCCAGGATCGGCCAGCTCATGGGCAAGAAGTACGTGTACCTTGGCCTGTATGACACGGAGATGGAGGCTGCCAAGGCTTATGACAAAGCGGCGATCAAGTGCTGTGGCAAGGAGGCTGTGACCAACTTTGACACCCAATCGTACGAGGACGAGCTCAACCTGCAATCTTGGGACAGCGAGCTTGATCTTGAGCTCAGCCTCGGGTGCTCCGGTGGCGAACGGGCCGCCGGCGAGGTCCTCCACTCTGCACCAAGCAACCAGAGGACGAGCCTGACGTTCATGCTGCCGGAGGAGGAGGAGATGACCGCCTGCCACCGTCAGAGGAGCATCTGGGCTAGGCCTTCCTTGGCTCCGGCGATGCCGGACGGCGGCGCGGTCATCTGTCCTGATCAGCATCAGCATCACCCCAGTAGCCGGAACATGCTCCTGATGAGCCAGGTCATCAGCAGTGGCGGAGGAGGAGGAAGCGGCAGGCAGGGCGCAGCAGAGCTACACATGCGTCCGCGCCATGGCTGGTCCAGCGGCGGCAATAATTGGGCGCCGCCGTACGCCGCCCGGCCCCGGCTGCCCGGCGCCGAAGACGACGACGACGACGACAGCGCCGCTGCAGCATCATCAGGATTCCCCATGGGGCAGGTGGCCACGGCGTCGTCCTCGTCCAGGCCCAGCAGCAGCAGCTGCAGCAGCAGGAGGAGCAGCACTGCCGCTGCCACTGCAACTACTGGCCGCTGA</cdnaseq>

Protein Sequence

<aaseq>MAATFYGVGSIALAMHEDDEEEGSGRVFGFAAGDLVRPAVVTQQLFPMTAAAAAVVPESTEQRHVAAAAEQWARPPSRKTRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAQAAARAYDQAAIKFRGVEADINFTLDDYKEDIKKMNNFSKEEFVQVLRRQGVGFVRGSSRFRGVTLHKCGKWEARIGQLMGKKYVYLGLYDTEMEAAKAYDKAAIKCCGKEAVTNFDTQSYEDELNLQSWDSELDLELSLGCSGGERAAGEVLHSAPSNQRTSLTFMLPEEEEMTACHRQRSIWARPSLAPAMPDGGAVICPDQHQHHPSSRNMLLMSQVISSGGGGGSGRQGAAELHMRPRHGWSSGGNNWAPPYAARPRLPGAEDDDDDDSAAAASSGFPMGQVATASSSSRPSSSSCSSRRSSTAAATATTGR</aaseq>

Gene Sequence

<dnaseqindica>1..323#527..552#659..689#827..914#1022..1167#1284..1328#1421..1512#1845..1954#2038..2193#2894..3193#ATGGCGGCAACCTTCTACGGCGTCGGCAGCATTGCACTCGCCATGCACGAGGACGATGAGGAGGAAGGGTCTGGGAGGGTCTTTGGGTTCGCCGCCGGCGATCTTGTCCGGCCGGCGGTCGTCACCCAGCAGTTGTTCCCGATGACGGCGGCGGCGGCGGCGGTGGTGCCGGAGTCGACGGAGCAGCGCCACGTTGCCGCCGCCGCCGAGCAGTGGGCCCGGCCGCCATCGAGGAAGACGCGGCGGGGCCCCCGGTCCAGGAGCTCGCAGTATCGCGGTGTCACCTTCTACCGCCGGACCGGCCGCTGGGAGTCCCACATTTGGTCAGTTCGTCTCTTGTCTTCTTCTTGTATTTATACATGTGCATATTTACGTACATTTGCTTTGCCTTCATATACTTGGCAATTGTATTCTGTAAAATGATTCTGACTGACCCATTTCAATCTCGCTTGCAATGTGCCAGCAATTTAAAAATTTTGCTTCTGTTATTTATCTTTGCTTGTGCTCTGTGTTTTTGAATGTGCAGGGATTGTGGGAAGCAGGTGTACTTGGGTGAGTGCTTTTGTCTTGTGGAAATGTCTCAGTTATATGGTCTGTCAATGCTTAATCAATTACGTGTCAGAATTTGTTCATGTGTGCATTGTGTGATTGTTTCTAGGTGGATTCGATACGGCACAGGCTGCTGCAAGGTAAAGCAGTTTATAACAGAGTTCTGCACATTGTCTTGTTTTTATCTGAAAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCAAGGTGGGTTAGAAAACTATCTGAATTGTTCGTCTTCTATGATCTGTTCCAGGGCTTATGACCAGGCTGCAATCAAGTTCCGTGGAGTGGAGGCAGACATCAACTTCACCCTGGATGACTACAAGGAGGACATAAAGAAGGTGATCAGATTAAGCCAGAGCAGAACAGATGCTACCCAAGAAAGAACTGTTCTGTTCACATGCATCTTTCTGAATTTTTTTTTTTGTCATGGCATTTGCATTGGCAGATGAACAACTTCAGCAAGGAGGAGTTCGTTCAGGTTCTCCGGCGACAGGGCGTCGGCTTCGTCAGGGGGAGCTCGCGGTTCAGAGGTGTCACCCTGCACAAGTGCGGCAAATGGGAGGCCAGGATCGGCCAGCTCATGGGCAAGAAGTAAATCAATCCACTCATTTCAGAAAAAAAAAAGAAGATGAAATTTTGTTAGTTTTAAAAAGTGAATGATTCAATTTTGTTCTGATTCGGTTTCGTTTCCTCCCCGATCGTCGCAGGTACGTGTACCTTGGCCTGTATGACACGGAGATGGAGGCTGCCAAGTATGTGACATCATCGTCGCTGTCTGCTGGAGTATTGCTTGTGATCATCACCTTGATGATTTGTTCTTAATTTATTTTTACTATGATATCAGGGCTTATGACAAAGCGGCGATCAAGTGCTGTGGCAAGGAGGCTGTGACCAACTTTGACACCCAATCGTACGAGGACGAGCTCAACCTGCAATGTAATCTGTCTCCCTGTTTGTATTACAAAACGCTTTGATTTTCTTGGGTCAATTTTTTTTATCAAATTTATAGAAAAACATAGTAACATTTCCAACACAAAACAAACATATTATCAGAATATACATTTAACAAAATTAGTTTAGTATTGTCAATGTTGTTAATTTTTTCTATAAATTTGACTAAAATTAGAAAAAAATTTGAAAGATAAATATCTTGAGGAAGTATCTCAGTTCTCTGATGAATGATCACGACAAAAATAAGTTGCCTGACAATTGGCAACTGGTATGCGCCTCGCATTTTCCTGACCGCAGTAGTGTTTTTGTTGTTGCAGCTTGGGACAGCGAGCTTGATCTTGAGCTCAGCCTCGGGTGCTCCGGTGGCGAACGGGCCGCCGGCGAGGTCCTCCACTCTGCACCAAGCAACCAGAGGACGAGCCTGACGGTGAGACTCGCATGTCCATTGCTAGATGACACTGTCGGTGACATTGACGATGAGCTGTTCCATGCCCGGGAAAAAAAAAACAGTTCATGCTGCCGGAGGAGGAGGAGATGACCGCCTGCCACCGTCAGAGGAGCATCTGGGCTAGGCCTTCCTTGGCTCCGGCGATGCCGGACGGCGGCGCGGTCATCTGTCCTGATCAGCATCAGCATCACCCCAGTAGCCGGAACATGCTCCTGATGGTATGTATGCTTACTGACAGTGGTGTTCCTACATTGATCTTCCTGAGATCACGGGCCCTGAGTAGATTATCTAATTCTAACTAATGTGTATCGTGTTAATTAGAAGTAAAAATTAGATAATTAGTACTACCTCTCCATTTCATATTAGGCTTAACAGTATAAAAGTGGCTTATGACTTTAAAAAAAGTCAAATGAAAAAGTTATTTATTTGTTTAAGCTTAGACTTTTCAACTCATAAGCTGGCCTATAAGCTTAAATAAAGAAGTCCTAAGTCGTTTGACTTTTTTTAAAATTAAATTTCTTAAGCTTTGATCAAGTTTATAGAAAAATACATCAATATTTTTAACATGAAACAAAGAAACTATCAAAATACATTTAGTTCTATAAGTGTTGCTGTATGTTTCTATATGTTCCTATAAACTTAGTTAAACTTTCTAAAAGATTGATTTAAAAAATACTAAAATAATTTATAATATGAAACGAAAGAAGTATATATAGAACTCCAGGCAGTTTTAATTCTGAGTTCGCAACTTGTCGCTGATCAGTTGATCACCTCACTAAAAGATGCATCATGCATGCTAAAAATTGCTAACCACGGGCTACAGGAGTACAAGGACGTGTCGTTTTGCTTTGATTATTTTTTGGCTTTGTGACGCAGTGATGAGTAAGTGTAACCCAACAGTATCTGACTGATGAACAGAGCCAGGTCATCAGCAGTGGCGGAGGAGGAGGAAGCGGCAGGCAGGGCGCAGCAGAGCTACACATGCGTCCGCGCCATGGCTGGTCCAGCGGCGGCAATAATTGGGCGCCGCCGTACGCCGCCCGGCCCCGGCTGCCCGGCGCCGAAGACGACGACGACGACGACAGCGCCGCTGCAGCATCATCAGGATTCCCCATGGGGCAGGTGGCCACGGCGTCGTCCTCGTCCAGGCCCAGCAGCAGCAGCTGCAGCAGCAGGAGGAGCAGCACTGCCGCTGCCACTGCAACTACTGGCCGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020813