Difference between revisions of "BGIOSGA021885"

From RiceWiki
Jump to: navigation, search
(Created page with "{{IndicaGene| GeneName = BGIOSGA021885| Description = cDNA clone:J023099E18, full insert sequence| Definition = Oryza sativa Indica Group BGIOSGA021885, complete gene.| ta...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA021885|
 
GeneName = BGIOSGA021885|

Revision as of 16:38, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA021885

Description

cDNA clone:J023099E18, full insert sequence

Definition

Oryza sativa Indica Group BGIOSGA021885, complete gene.

LocusTag

OSJNBA0085L11.4

Ensembl Transcript ID

BGIOSGA021885-TA

Ensembl Protein ID

BGIOSGA021885-PA

Length

2532

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:3320699..3323230

Sequence Coding Region

3323102..3323230,3322858..3322987),complement(3321864..3321970,3321659..3321793),complement(3321466..3321569
,3321277..3321377),complement(3320699..3320826

Genome Context

<gbrowseImage1> name=IndicaChromosome06:3320699..3323230 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:3320699..3323230 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGCTGGACGTCTCCGCCATGGAGAACAACTTCGCCGCCCACGCCGCCGGCGGCGAGGACGACGGCGGCCTCTTCGGCGCCGGCGCCGACCTGCCCGCCATGGAGCTCCCCACCTGCCCCGCCGACTTCGACGGGTTCCAGAAGGAGACCAAGGAGATGCTGAAGCACAAGAAGGGAACGACCACGCTCGCGTTCATCTTCGACAAGGGCGTCATCGTCGCCGCCGACTCCCGCGCCAGCATGGGCGGATACATATCTTCGCAAACTGTGAGGAAAATTATTGAAATAAATCCGTACATGCTTGGAACAATGGCAGGAGGTGCTGCTGATTGTCAATTTTGGCATAGGAACTTGGGCATCAAGTGCCGACTCCATGAGCTCGCGAACAAGCGGAGGATCTCTATTGCTGGTGCTTCAAAGCTTTTGGCCAACATCCTGTACTCCTACCGTGGGATGGGACTGTCAATTGGTACAATGATTGCTGGATGGGATGAGAAGGGTCCTGGCTTGTACTATGTTGATAGTGAGGGCGCAAGGCTCATGGGAAGCCGATTCTCTGTTGGATCAGGTTCTCTGTATGCCTATGGTATCTTGGACGAGGGTTACCGCTATGTGATGCCAGTTGAGGAAGCTGCTGAGTTAGCAAGGCGGGCTATTTACCAAGCTACATTCCGTGATGGGGCAAGTGGTGGTTGTGTTAGCGTTTACCATGTTGGCCCGAACGGCTGGACGAAGCTTTCTGGAGATGATGTTGGGGAGCTGCACTACAAGTACTACCCGGTTGAGGCCATTCCTGTCGAGCAGGAAATGGCCGATGCCCCAGCTGCTTAA</cdnaseq>

Protein Sequence

<aaseq>MKLDVSAMENNFAAHAAGGEDDGGLFGAGADLPAMELPTCPADFDGFQKETKEMLKHKKGTTTLAFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISIAGASKLLANILYSYRGMGLSIGTMIAGWDEKGPGLYYVDSEGARLMGSRFSVGSGSLYAYGILDEGYRYVMPVEEAAELARRAIYQATFRDGASGGCVSVYHVGPNGWTKLSGDDVGELHYKYYPVEAIPVEQEMADAPAA</aaseq>

Gene Sequence

<dnaseqindica>1..129#244..373#1261..1367#1438..1572#1662..1765#1854..1954#2405..2532#ATGAAGCTGGACGTCTCCGCCATGGAGAACAACTTCGCCGCCCACGCCGCCGGCGGCGAGGACGACGGCGGCCTCTTCGGCGCCGGCGCCGACCTGCCCGCCATGGAGCTCCCCACCTGCCCCGCCGACGTGAGTGCCCTAGCTTTGTCGATTTCGATCCCCTTTTGCCGCGATCTGATTCTCTTAAGTTTCTAAACCCTCTATTGATCTCTGGTGGTGTGTGTGGGTGGGGGATGCGGGCAGTTCGACGGGTTCCAGAAGGAGACCAAGGAGATGCTGAAGCACAAGAAGGGAACGACCACGCTCGCGTTCATCTTCGACAAGGGCGTCATCGTCGCCGCCGACTCCCGCGCCAGCATGGGCGGATACATATGTGAGCGCTCGGCCCTCTTCCCCTCTCGCGCTTCGATTTTAGGGGCGTCTTAGGGTTTGGCAGCTGCGCTTAATTTGTGATGTGGTCGTGTGATTCGGGCCTGAGAAGTTTAGATCTTAATGCGGAATTTGATGCATTGGTCTGTCGATGGGTGGAGTAGCAAGAGCTTATACTTATAGGTGCATGGAAAGTTGCGGACTTGCGGTTATCTACGAGATTTGTGTTCTCCAGTGATATTTAGGTTTGGAATTGATAGGGAGATTCTTAATTCAATAACTAGACTAGAGTAGGGAAATCTGCATACAGTGGTTCTTTTACACTTTATCAGAGAACGAAGGAAACTAGTTGGTAGTGTTTGGTTATGAATGGTGTGGTGAAGGCTTTATACTGTAAACTAGTTTATTTAGGAATGGATAGCGTAGAACTATTTGTCGACAGATTGGGATTTGATGTAGTGTAGATAAGCTAGGTTTCTGGTGGGAAAAGGTTTGCTTTGAAAAGATTTACCCTAGGATGCAAGTTGTGTACAGTGGTACATGATGAGTCAAATGTTTTGCGAAGGTCAGGCTTTTATGCTTACCTATTTATCATTTATGCTCTTTGTGCTTTGGATGGATATAAAGTTCAACCCTGTACTCTAGAGAATTACACTGTTTTGTGTGGAAATCACTGATCTGAACTGACAGTACAACACAATGACCCTAAGCGCTATTATTTTCTTATTACAAGTTCTAATCCTTTTGTAAAAACTTGTCTTTGAATATTATCATAGAAAAGTAACTTTGTCAAAATGCTTGTTGCTGTTTCAGAAGACCTTGCTTTATTGCAAGGATGGTCACTTAATCTTACTTATTGGGTCTTAATATCACATTTCTTCTTACCTGCAGCTTCGCAAACTGTGAGGAAAATTATTGAAATAAATCCGTACATGCTTGGAACAATGGCAGGAGGTGCTGCTGATTGTCAATTTTGGCATAGGAACTTGGGCATCAAGGTTAGATTTCAACTTGATTGTACTTGCATTTCATCATTGCAGAGAACTAAAAGTAGGTTATGCTTTTCAGTGCCGACTCCATGAGCTCGCGAACAAGCGGAGGATCTCTATTGCTGGTGCTTCAAAGCTTTTGGCCAACATCCTGTACTCCTACCGTGGGATGGGACTGTCAATTGGTACAATGATTGCTGGATGGGATGAGAAGGTGAATTCAGCCTACATGCCTTTGATTAGAAGTCTTAAGTTTATGTGCTGTGTGCTACTCTATACTTAATGTGTTCTATCTCGATCTAGGGTCCTGGCTTGTACTATGTTGATAGTGAGGGCGCAAGGCTCATGGGAAGCCGATTCTCTGTTGGATCAGGTTCTCTGTATGCCTATGGTATCTTGGACGAGGGGTAGGTTTTATCTTTTATTTACCTCCTTTTATGTTGCTTTGCTGCTTGCTTATACTGTGTTACTTACGTATGAACTTCCGCTTTTCAGTTACCGCTATGTGATGCCAGTTGAGGAAGCTGCTGAGTTAGCAAGGCGGGCTATTTACCAAGCTACATTCCGTGATGGGGCAAGTGGTGGTTGTGTTAGCGGTATGCTTTCTGTTTACCGGTCTCTGCTTCATGATATCTCTTGTGATAATTTCTATTCCTGTCATGTTTCCACTTTCCACACAACTGTCTGCCTTAATTATGGCTTGGATTCATATTAAATCAATCCATCTTACTGCATTTAACAGTAACATCAAACAACCTTTAGGGTATATCATTGATACATTGTTAGTCATCAACAATTTTTATTAGATATGCATTTTAGCACCTTGGTAACAGCATTGGTGATTCAATCAACAAATAATGCTGAAGTACCCCTTTCGCTTGTTACGATTGGGGGAAATTATGTGTGCTACATAGGACTTTTGGAGGGCACAGTTACAAAATGAAGATCCTATTGATTATCTGCTGACTGCACCCCGCCTTTGTTAGTTCAAACATGAATTGTGGGATTGTGCCAGAACTGACGTTATCCTTTTGTTTGAATTTCAGTTTACCATGTTGGCCCGAACGGCTGGACGAAGCTTTCTGGAGATGATGTTGGGGAGCTGCACTACAAGTACTACCCGGTTGAGGCCATTCCTGTCGAGCAGGAAATGGCCGATGCCCCAGCTGCTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021885