Difference between revisions of "BGIOSGA024525"

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(Created page with "{{IndicaGene| GeneName = BGIOSGA024525| Description = cDNA clone:002-169-D08, full insert sequence| Definition = Oryza sativa Indica Group BGIOSGA024525, complete gene.| t...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA024525|
 
GeneName = BGIOSGA024525|

Revision as of 16:52, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA024525

Description

cDNA clone:002-169-D08, full insert sequence

Definition

Oryza sativa Indica Group BGIOSGA024525, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA024525-TA

Ensembl Protein ID

BGIOSGA024525-PA

Length

4943

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:8367849..8372791

Sequence Coding Region

8372711..8372791,8372352..8372534),complement(8370238..8370363,8369122..8369436),complement(8368802..8368930
,8367849..8368232

Genome Context

<gbrowseImage1> name=IndicaChromosome07:8367849..8372791 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:8367849..8372791 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTTTAAAAATATCAACGGTGTCAGGGAGTATATTATACAGGGACCACCGCTCTACCCCAGCCCATCCACGTGTAAAGCGCGGCCCGAGCTGGCGTTCCAGGAGGTGCGGACGAGCGAGCTGGTGCGCGCCGAGCTGGACGCGATCGGCGTCCCCTACGCGTGGCCCGTCGCACGGACGGGGGTCGTCGCCACCATCGACGGCGGCGCCGGCGCCGGCCCCGTCGTCGCGCTCCGGGCCGACATGGACGCGCTCCCGCTGCAGGAGCTCGTAGACTGGGAATTCAAGAGCCAGGAGAAAGGAAAGATGCATGCCTGTGGACATGATGCTCATGTGACAATGCTTCTTGGAGCTGCTAAGCTACTTCAATCTCGGAAGGATGAATTGAAGGGCACTATCAAGCTGGTGTTCCAGCCAGCCGAAGAGGGCCACGCCGGGGCGTACCACGTCCTGGAATCGGGCCTCCTGGACGACGTCTCCGCCATCTTCGGCCTCCACGTCATCCCGAACCTCCCCGTCGGCGTCGTGGCGTCCCGGCCGGGGCCGTTCATGTCTGCGGCGGCGCGGTTCGCCGCGACGTTCACCGGCAAGGGCGGCCACGCCGGCGTCCCCCACGACGCCGTGGACCCCGTCGTCGCCGTCTCCTCCGCCGTCCTCAGCCTCCAGCAGCTGGTCTCCCGGGAGACCGACCCTCTCGAGGCTGCTGTGGTCTCTATCACAATACTGAAAGGAGGTGATGCTTACAATGTCATTCCTGAATCTGCATCGCTGGGAGGCACCTTCAGGAGCATGACTGATGAAGGCCTGGCATATCTGATGAAGAGGATCAGAGAGATCATCGAAGCCCAGGCCGGCGTGAACCGCTGCGCCGCCGCCGTCGACTTCCTGGAGGAGGAGCTCCGGCCGTACCCGGCCACCGTGAACGACGACGGGATGTACGGCCACGCCAAGGCGGTGGCGGAGGCGATGCTCGGCGAGGCCAACGTGAGGGTCGCCGCCCGGAGCATGGGCGGCGAGGACTTCGCCTTCTACGCGCGGCGGTCGCCGGGGGCCTTCTTCTTCATCGGCGTCGGCAACGAGACCACCATGGGGCCCGCCGCCGCCGTCCGGCCGGTGCACTCGCCGCACTTCGTCCTCGACGAGCGCGCGCTGCCGGTCGGGGCGGCGCTCCACGCCGCCGTCGCGATCGAGTACCTGAACAAGCACGACTGCTCGTGA</cdnaseq>

Protein Sequence

<aaseq>MFKNINGVREYIIQGPPLYPSPSTCKARPELAFQEVRTSELVRAELDAIGVPYAWPVARTGVVATIDGGAGAGPVVALRADMDALPLQELVDWEFKSQEKGKMHACGHDAHVTMLLGAAKLLQSRKDELKGTIKLVFQPAEEGHAGAYHVLESGLLDDVSAIFGLHVIPNLPVGVVASRPGPFMSAAARFAATFTGKGGHAGVPHDAVDPVVAVSSAVLSLQQLVSRETDPLEAAVVSITILKGGDAYNVIPESASLGGTFRSMTDEGLAYLMKRIREIIEAQAGVNRCAAAVDFLEEELRPYPATVNDDGMYGHAKAVAEAMLGEANVRVAARSMGGEDFAFYARRSPGAFFFIGVGNETTMGPAAAVRPVHSPHFVLDERALPVGAALHAAVAIEYLNKHDCS</aaseq>

Gene Sequence

<dnaseqindica>1..81#258..440#2429..2554#3356..3670#3862..3990#4560..4943#ATGTTTAAAAATATCAACGGTGTCAGGGAGTATATTATACAGGGACCACCGCTCTACCCCAGCCCATCCACGTGTAAAGCGGTGGGCGCGGCCCATGCGATGTCACAACCAAACCAGATAGAGAGATCGGTAACCAGTGCCATATCATACATTCGTGAGCAACCGTCACTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTGGCTGTCCGGGCTGCGGCGGCGCATCCACCAGCGGCCCGAGCTGGCGTTCCAGGAGGTGCGGACGAGCGAGCTGGTGCGCGCCGAGCTGGACGCGATCGGCGTCCCCTACGCGTGGCCCGTCGCACGGACGGGGGTCGTCGCCACCATCGACGGCGGCGCCGGCGCCGGCCCCGTCGTCGCGCTCCGGGCCGACATGGACGCGCTCCCGCTGCAGGTAGGTTGGGTGATCGTACTACCGTATAGTAGTAACACTAACATATACTATATTCTTTGCCTTGATTAATTGTGTGATTCTTCGTTTGGGAATAATCATCTTAAGGTAGAGTCTGAATTGATTTTCATTAGAAATGATAGAGAAAAGAAGCTAAATTGGAAGGATTTTACTTTGTATTAACGCTCTTTGGAATGAATAGTCAAACTATCGATAATGATTAGTACTCTCTCCGTTTTATATTATAAGTTGTTTTGACTTTGGTTCAAATCAACTGCTTCAAGTTTAATTAAATTTATAGAAAAAAATAGTAATATTTTTGACCGAAGATATATTTATTATAAAAATGTATTTAATTATTAATTCAATAAATCTAATTTGGTAATATAAATATTACTATATTTGTCTATAAAATTAGTTAAACTTGAAGCAGTTTGACTTCAAAACATCTTATAACCTGAAACGGAAGGAGTATGTGTTAAACAGTACGGATATTTTTTATTTTATTTTACCCCCCGAGAGAAAACAGCAACATAGTGAGATGTGAATATTGGTTATAGAAAAACAGTAAGTAATGTAGTTTGGATTATGTATCATTAGCAAGAGAATATATATGTCCGGTTTCGAAAAAAAAGGCAAGAGAATATGTCGGGACGAATCTTAATTTGTGAAAGTGAAAGGCAGAGAAATGGTTAAGGAAATCCCTTTCATTGATTTTTTTTTCAACTTTACACATGCCAAGATTAATTGAGTTATTAAGAGATTGTTTTTATATGCTAAATTGCTAATGGTTGTCTTACTTGCGGTTTTTATGATGCAAACGTTGTTGGAGACTTGGAGTTATGTTCAGTGTCTGCTAATGATTGTTTTCACTTGGTTTTTATAATGTAAACATTGCTGGAAACTTGGAATTAAGTTCACTGTCTGCCGATGATGTTCCACATGGGAATCTTTTTTATTGATCTGTTTCGGCTTTAAATTACCTGAGGTTGAATCAATTTTCGACTTTATAATATGGACTTGAAAATGACAACCAACAAATCTCATTGCATCAGCCAAACACAAACTCTTGCCATCAGTATTGTTCAATTAGTTTGTCTTGACGCATCATAAAACCAAGTGAAACAATCATTAACAGACACTGAACATGACTCCAACAATGTTTGAACAAATTGTCTATTTTCTGTCACATAAAAGAGCATTATACATCATCAAACAAATAAAATTGACGTCAAGAAAATAAAGTTATGGTACCATTATTATTAGGGTTTTATTATTACTATTTTGAGATAAGTAGTATTTTCTCTGGTCCCATAATTCTTAACGTTTTGAATAAGGTTAAAGTTATACACATCAAAACTTTGACTATCAATAATTATTAAAATATATAGTTAGAGATATTAGAACCTAATATATAGATTAGTCTTACAAAACATTTTAATGGAAATAAACATTTACTTATTTCTCATGTGGGCATGAGAAATGCGATTCTTCTATGAAAAAGAAAGCATTGTTCTAATCGAATTTGATGCCCTACAATTAAGGACGAAATGACACGTGGAAATAGACGTGATGTATTGTGTTTTGGTCGTATCAAGGGACGGATTCGCAAACGATATTTCGGCAGCAAGAGCAACCTCGTATGAAATTGTATATTCTTGTTTTGAACGAAAATATGAAATTGTATATGAGCGTAGTCTATTTAATTTCAGCATCACAAATATCATTACTTATTCCTTGTTGGTAACTGTACTCAGGGGCGGATCCAACGTGGGTGCAGGGGGACTCGAGTCCCCCCTACACCCACAAGACCCATGGATACCTCCGGAGCACCCCCTTCAATTTTCTCATAATGAATGATAAACTAAATGTCCTTATATGGCTGGAGGTTGAAGAAACTGTGTAATTGAGCCCCCCAATTTTTTTATTCCTGGATCCGCCCCTGACTGTACCAACTTATTTTCATTGACTATGATATTTCCTTTTGGCAGGAGCTCGTAGACTGGGAATTCAAGAGCCAGGAGAAAGGAAAGATGCATGCCTGTGGACATGATGCTCATGTGACAATGCTTCTTGGAGCTGCTAAGCTACTTCAATCTCGGAAGGATGAATTGAAGGTAATCTGCAAACCAAGTTTTTCCAAACATGTGCTTAATTATATAGCCATGGTGAAATTAAATTCAGATATTTGTGTCCCAACAGCGAGTCTGTCAAAATGTCAAATAAAACGTATAGCGGCATGTATTACAAGTAAATGAAACAATTGGTAGCTTGAGAAATTTTATCATTTTATTAAACAAAGATGGCCAAATTTGAATCTTCTTTGCCTTTCATTTCTGAAGGCTCGTCAGTCATCACTCAATCTGGTTCAAAAAAATCAATCCAAGGACATATATTCTTCTATTATCTGAAAACAACGTTATTGAGGCCAACTTAAGAGTGCGAGGTGAATGAATCCATGTGGCTCTTGCTCAACGTTCAAGAACTTCCGAATAAAATTTCCGAAATTCTCTGTCAACCATTTGGTCCTAGTATGATATATCCCTCCAACCAATAATTTTGAATTTGTTTGAATTCAGCCAAAAAAAATCCCTTCTTTCCATTTTAAGCATAGCCATGAGTTTCCATGTTTAATTTTGATCGTCCGTCTTATTTGAAATTTTTTATGATTAATATTTTATTATTATTAGATGATAAAACATAAATAATACTTTATGTGTGACTTATGTTTTTTTTTAATTTTTCAAAACAAAATTCAAATAAGATGGACATGGAAACTTAAAATGAAACGAAGGGAGTATATAATTTCAGTGAAATGAGTGCAAATTTAAAAATAATTCGTTTGAAATACCATAAATTGGCATAATTCCCTCCATTCTGAGATGAAAAAACCCTGCTCTTTTTGCTTCCATTTACAGGGCACTATCAAGCTGGTGTTCCAGCCAGCCGAAGAGGGCCACGCCGGGGCGTACCACGTCCTGGAATCGGGCCTCCTGGACGACGTCTCCGCCATCTTCGGCCTCCACGTCATCCCGAACCTCCCCGTCGGCGTCGTGGCGTCCCGGCCGGGGCCGTTCATGTCTGCGGCGGCGCGGTTCGCCGCGACGTTCACCGGCAAGGGCGGCCACGCCGGCGTCCCCCACGACGCCGTGGACCCCGTCGTCGCCGTCTCCTCCGCCGTCCTCAGCCTCCAGCAGCTGGTCTCCCGGGAGACCGACCCTCTCGAGGCTGCTGTAATGTGACCGATCGATTTCATTAATTTGCTCTAATTGTGACTTTGCATATATATAAGTAGCAGTAATATTATAATAGGAAGAAATTAATTATACTGTTATTGTGCAGCAATACAATTTTGCTTCTGTGACATTGTGAAATCTAGAATGACTTGTGGATCACCTGGTTGCTGTGGATTAATTAATTTCAGGTGGTCTCTATCACAATACTGAAAGGAGGTGATGCTTACAATGTCATTCCTGAATCTGCATCGCTGGGAGGCACCTTCAGGAGCATGACTGATGAAGGCCTGGCATATCTGATGAAGAGGATCAGAGAGGTAAACATGTCTCACTGCAAACTTAGAAAATATGGCAACAATTCCACTGTACAGCTTAAATCTATCCATTTATGAAATGTTTAGATCATAAAACCCTGTATTATATGTCACATTTTTTTATTTTTGGGTTTCATATAACCTTTTAAGGTTTTCCAAAAAATAAATATAGAAATATAAAAAATAGTACTTTATCTAGTTAAAAATATTTGATGCCAGGACCACTAATTGCAGCAGCCGACGTCAAATATTTTCGACTAGAGGAAGTAAACAGATTTAACCGTGGTAGCAGGGTTCAAAATTTCAGAATGAATTTAAATTCGGTCATTTCGGAACCCCCGATACGATAATATTTCGGCTGAAAATTTTAAACTTTTTATTTTTTTTGTGAATTTGTAATATTTTGTTCAAATATAACCAACATTTGTTTAAAATTTCGGAAATTTTGGACTAAAATTTTAGTATATCGGTGACCTCTGGTAGAATCGGCCGAACAGAAAATTTGAAACCTGCGTGGTGGTGATCACTAATAATGATTAATAATGAATAATGCTTGTAATTAAATTTGGAAGATCATCGAAGCCCAGGCCGGCGTGAACCGCTGCGCCGCCGCCGTCGACTTCCTGGAGGAGGAGCTCCGGCCGTACCCGGCCACCGTGAACGACGACGGGATGTACGGCCACGCCAAGGCGGTGGCGGAGGCGATGCTCGGCGAGGCCAACGTGAGGGTCGCCGCCCGGAGCATGGGCGGCGAGGACTTCGCCTTCTACGCGCGGCGGTCGCCGGGGGCCTTCTTCTTCATCGGCGTCGGCAACGAGACCACCATGGGGCCCGCCGCCGCCGTCCGGCCGGTGCACTCGCCGCACTTCGTCCTCGACGAGCGCGCGCTGCCGGTCGGGGCGGCGCTCCACGCCGCCGTCGCGATCGAGTACCTGAACAAGCACGACTGCTCGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA024525