Difference between revisions of "BGIOSGA024813"

From RiceWiki
Jump to: navigation, search
(Created page with "{{IndicaGene| GeneName = BGIOSGA024813| Description = CBL-interacting protein kinase 23| Definition = Oryza sativa Indica Group BGIOSGA024813, complete gene.| tag = CIPK23...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA024813|
 
GeneName = BGIOSGA024813|

Revision as of 16:54, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA024813

Description

CBL-interacting protein kinase 23

Definition

Oryza sativa Indica Group BGIOSGA024813, complete gene.

LocusTag

CIPK23

Ensembl Transcript ID

BGIOSGA024813-TA

Ensembl Protein ID

BGIOSGA024813-PA

Length

3699

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:2620845..2624543

Sequence Coding Region

2624373..2624543,2623778..2623840),complement(2623113..2623184,2622920..2623027),complement(2622751..2622831
,2622460..2622513),complement(2622207..2622332,2622023..2622112),complement(2621818..2621937
,2621614..2621730),complement(2621379..2621495,2621233..2621289),complement(2621040..2621114
,2620845..2620943

Genome Context

<gbrowseImage1> name=IndicaChromosome07:2620845..2624543 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:2620845..2624543 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGCGTGTCGGGCGGGAGGACGCGGGTGGGGAGGTACGAGCTCGGGAGGACGCTCGGCGAGGGCACCTTCGCCAAGGTCAAGTTCGCCCGCAACGCGGACTCCGGCGAGAATGTCGCCATCAAGATCCTCGACAAGGACAAGGTCCTCAAGCACAAGATGATCGCCCAGATAAAGCGCGAGATCTCCACCATGAAGCTCATCAGGCACCCCAACGTCATCCGGATGCATGAGGTGATGGCCAGCAAGACCAAAATATACATAGTGATGGAGCTTGTCACCGGTGGTGAACTTTTCGACAAGATTGCTTCGCGTGGGAGGCTGAAAGAGGATGATGCAAGGAAGTATTTTCAGCAGCTGATCAACGCTGTCGATTACTGTCATAGCAGAGGAGTCTATCACCGGGATCTCAAGCCCGAAAATCTTCTGCTTGATGCTAGTGGCACTCTCAAAGTATCAGATTTTGGGCTGAGTGCACTGTCTCAACAAGTCAGAGAGGATGGTCTGTTGCACACTACCTGTGGAACTCCTAATTATGTTGCTCCCGAGGTTATCAACAACAAAGGATATGATGGAGCCAAGGCTGATCTGTGGTCATGTGGAGTGATTCTCTTTGTCCTCATGGCAGGCTACCTTCCATTTGAAGACTCAAACCTCATGTCACTTTACAAGAAGATCTTCAAAGCAGACTTCAGTTGCCCGTCTTGGTTCTCTACAAGTGCGAAGAAGCTCATCAAGAAAATACTAGATCCTAATCCTAGCACCAGGATAACCATCGCAGAGCTTATCAACAATGAGTGGTTCAAGAAGGGATATCAGCCTCCAAGGTTTGAGACAGCAGATGTTAACCTGGATGATATCAACTCTATTTTTAATGAATCTGGGGACCAAACACAGCTTGTTGTCGAGAGGCGAGAAGAGAGGCCATCAGTGATGAATGCTTTTGAGTTGATCTCTACATCTCAGGGTCTCAATCTTGGCACACTCTTTGAAAAGCCATCGGGTTCTGTGAAGCGAGAAACAAGATTTGCATCAAGGCTGCCTGCAAACGAGATATTGTCGAAAATTGAAGCAGCTGCTGGACCCATGGGCTTTAATGTACAGAAGCGCAACTACAAGCTGAAGTTGCAAGGAGAGAATCCAGGAAGGAAAGGTCAGCTTGCAATTGCAACAGAGGTTTTTGAAGTCACGCCCTCGCTGTACATGGTTGAGCTCCGCAAATCTAACGGCGACACTCTTGAATTCCATAAGTTCTACCACAACATCTCCAATGGCCTGAAAGATGTGATGTGGAAGCCGGAGAGTAGCATAATCGAAGGCGATGAGATCCAGCATCGGAGGTCACCGTGA</cdnaseq>

Protein Sequence

<aaseq>MSVSGGRTRVGRYELGRTLGEGTFAKVKFARNADSGENVAIKILDKDKVLKHKMIAQIKREISTMKLIRHPNVIRMHEVMASKTKIYIVMELVTGGELFDKIASRGRLKEDDARKYFQQLINAVDYCHSRGVYHRDLKPENLLLDASGTLKVSDFGLSALSQQVREDGLLHTTCGTPNYVAPEVINNKGYDGAKADLWSCGVILFVLMAGYLPFEDSNLMSLYKKIFKADFSCPSWFSTSAKKLIKKILDPNPSTRITIAELINNEWFKKGYQPPRFETADVNLDDINSIFNESGDQTQLVVERREERPSVMNAFELISTSQGLNLGTLFEKPSGSVKRETRFASRLPANEILSKIEAAAGPMGFNVQKRNYKLKLQGENPGRKGQLAIATEVFEVTPSLYMVELRKSNGDTLEFHKFYHNISNGLKDVMWKPESSIIEGDEIQHRRSP</aaseq>

Gene Sequence

<dnaseqindica>1..171#704..766#1360..1431#1517..1624#1713..1793#2031..2084#2212..2337#2432..2521#2607..2726#2814..2930#3049..3165#3255..3311#3430..3504#3601..3699#ATGAGCGTGTCGGGCGGGAGGACGCGGGTGGGGAGGTACGAGCTCGGGAGGACGCTCGGCGAGGGCACCTTCGCCAAGGTCAAGTTCGCCCGCAACGCGGACTCCGGCGAGAATGTCGCCATCAAGATCCTCGACAAGGACAAGGTCCTCAAGCACAAGATGATCGCCCAGGTCAGCTCACCCATACTATTTTCTATCCCCCCAATCGATTCTCGATTTGGAGAGGTCTCCATGGATTTCTTCCCATGATGATAGTACTGTTCGAATTTCTCGCCTTCTTGTTTTTTTTTAATCATATCATACGCTGTTCTTGAGTGAATTTCGTGGACAATTTCAATTCCTATACGTACGAGTCCCAAATCATGAACAGTTTGTACTACTGCTGTTTTGTTTCCTCTCACGACAAGACGTGATGATTTTGTTTTAACCAGCAACAGTAAACATTACTAATTACTACTAGCGTTCTTGCTGCAAAAAAAAAAAAAAAGGTTTGGTATCGTTCCAAAATTGCGTTCTTACTTCCAAAATTGCAACAGCCTAGACTTTGACGTGAGGTTAGCACGGGCGCCTCGTGCAGTGTTCGTTGGAACTTGTGCTGAGTTAGTTATTATTAATGTGCATCAACTTTGGCTTAGCTTCTGACTTTTTGTGGGGGAGTTCTGACTTTGATGTGTGTTTGTGGTTTGTGTGGTGGTGTTTGCAGATAAAGCGCGAGATCTCCACCATGAAGCTCATCAGGCACCCCAACGTCATCCGGATGCATGAGGTTTACTAATCTCCAATCATTAATCTCAGCTCATCTTGCCCATGGAAAAATTTTGTAACTGATGATAAGTCCACCAATGAAATCGACTAATCATAAGCAGGGCTCGTGATTTTGGTTCGAAATTTTCGAAATTTCGGGTCTACCAGTGGGTCCTGGTTGGATGTGATTCCCAGTCTTGAATTGTGGATTTTTTTTTAATTTTGTAAAATTTGTTCGAATTCAGCTAGAGCCTGTTCAAAATTCATTTTTTTTCTGGTTTGAAACTTCTGAAAAATTTTGGTCCCCCCTGATTTTTTTTTTCTGGGCCGAGATTGTGAACCCTGCTAATTAAGTTAAGATATGGTTCTCAAGGCTTTGAGCAATCTGAAATTATGAAAAACCAGGGTAAATTAAATTGGTCAAGGATGACATAATGAACAAGTTGTTCCTTCACATGAAAAGTTGCAATTAGAGATCGTTCTGGAAGGAAATTCCTGTGACACTAAACTATGTGTTATCTGAAACTTTCCTAGCTCTTGCTTTCTGATATTTTCCTTTTGTTGTCTTGGCTTTATGTCGATCTCCACTTAGTGGTTTTGTTTTCTTCTCTGAAGGTGATGGCCAGCAAGACCAAAATATACATAGTGATGGAGCTTGTCACCGGTGGTGAACTTTTCGACAAGATTGTGAGTGCTTGGCCTTTTCTATCGACATCTGAATTACTCTTTATGCTATGCACGCATGTTCAATTTGTCATAATTCCTGTTATAGGCTTCGCGTGGGAGGCTGAAAGAGGATGATGCAAGGAAGTATTTTCAGCAGCTGATCAACGCTGTCGATTACTGTCATAGCAGAGGAGTCTATCACCGGGATCTCAAGGTTAGCGGCGTTTAACTGTTTGCGGTGTTTACTACTGCTATGCAAGAGAGCCGAGAAGCAGTGAATTGATACACAAATTCAATTTCAGCCCGAAAATCTTCTGCTTGATGCTAGTGGCACTCTCAAAGTATCAGATTTTGGGCTGAGTGCACTGTCTCAACAAGTCAGAGTAAGTAATTTGACTCTTCCTATTTATTCTTTTATTATCTTTTTGTGGAGAGTTTCCTTTTATTCAAAGTGATGAAAAGCCAAGAGTTGTTAGTCGTAAAAAAAATTAGCATTTCAATTGCTTTCTGTAGATTCCATTTGTTTTCTACATCTTTTCACATGGTAATACAGATAGTTTCAGATCCATCTGAATAAAGTTCTTACATTAGTGCTGCATATCTTTCTGTTTACTCTGCAGGAGGATGGTCTGTTGCACACTACCTGTGGAACTCCTAATTATGTTGCTCCCGAGGTACCTTCTTACACTCATACATTAAACTAGTATATAGTTATTATCATCGTTGGATTGAATATTTGTTCTCATGTTACTTATCTAAAAAAATATCTGTTCTCATGTTTCAATAATATTGTCTGTGCAGGTTATCAACAACAAAGGATATGATGGAGCCAAGGCTGATCTGTGGTCATGTGGAGTGATTCTCTTTGTCCTCATGGCAGGCTACCTTCCATTTGAAGACTCAAACCTCATGTCACTTTACAAGAAGGTTGGTCCCTCTTAACCATGTCAAAGGATTGTTGGTTTATGAACCCTAAACAAAGTTTTTGTTTGGAAGATTAATGTGATTATTGCTCATCCAGATCTTCAAAGCAGACTTCAGTTGCCCGTCTTGGTTCTCTACAAGTGCGAAGAAGCTCATCAAGAAAATACTAGATCCTAATCCTAGCACCGTATGTTTTGCAGCATTTTAACCTTCATTTCTTTGGAGCATTCTTATACATAAGTAGCTTATCCCATCGTTATCTCCTTGTGCAGAGGATAACCATCGCAGAGCTTATCAACAATGAGTGGTTCAAGAAGGGATATCAGCCTCCAAGGTTTGAGACAGCAGATGTTAACCTGGATGATATCAACTCTATTTTTAATGAATCTGGGGTAAGCTCTCACACCATTCAGCTCATAGCATTACATTCTTCATAATGCACTGGATGGGCTTGGTAACATCTATTCTAACTAACGCAGGACCAAACACAGCTTGTTGTCGAGAGGCGAGAAGAGAGGCCATCAGTGATGAATGCTTTTGAGTTGATCTCTACATCTCAGGGTCTCAATCTTGGCACACTCTTTGAAAAGCCATCGGTACGATCGCATTCTTAAATTGGTCATTCTGAAGTCTGAACTAAACATGTTCAAGTAAACTTACAGTCATGAGTTATAATCTAAAATGCTAAACCAATTTTCTTTCTACTTTTAGCAGGGTTCTGTGAAGCGAGAAACAAGATTTGCATCAAGGCTGCCTGCAAACGAGATATTGTCGAAAATTGAAGCAGCTGCTGGACCCATGGGCTTTAATGTACAGAAGCGCAACTACAAGGTAACTAATCCAAAATTCCACAACTTGTTTCTACCATTTTTATCTGAAACAATTAACATTCTGATGACACTTTTATGGATTGGAATCAGCTGAAGTTGCAAGGAGAGAATCCAGGAAGGAAAGGTCAGCTTGCAATTGCAACAGAGGTACACCAATGATACAACATCACTATTTACTATGTTCTGTCATTCTATATGCTGTGCAGCTTGTGCTACTACTCTTTCCTGGGTTTATAGACTGAAATCAGTTCATCCATTTCTAAAGGTTTTTGAAGTCACGCCCTCGCTGTACATGGTTGAGCTCCGCAAATCTAACGGCGACACTCTTGAATTCCATAAGGTACACATAACAGTAAAATTACTGCAGGACCTCACAGTTCATACTTCAGACTGGGATTCGGCTAACTCATGGTGTAATTTTTTACGCGTTTCGCAGTTCTACCACAACATCTCCAATGGCCTGAAAGATGTGATGTGGAAGCCGGAGAGTAGCATAATCGAAGGCGATGAGATCCAGCATCGGAGGTCACCGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA024813