Difference between revisions of "BGIOSGA025316"
(Created page with "{{IndicaGene|
GeneName = BGIOSGA025316|
Description = Plasma membrane atpase 1|
Definition = Oryza sativa Indica Group BGIOSGA025316, complete gene.|
tag = A3|
tid = BGIO...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{IndicaGene| | {{IndicaGene| | ||
GeneName = BGIOSGA025316| | GeneName = BGIOSGA025316| | ||
Revision as of 16:56, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
BGIOSGA025316 |
|---|---|
| Description |
Plasma membrane atpase 1 |
| Definition |
Oryza sativa Indica Group BGIOSGA025316, complete gene. |
| LocusTag |
A3 |
| Ensembl Transcript ID |
BGIOSGA025316-TA |
| Ensembl Protein ID |
BGIOSGA025316-PA |
| Length |
5601 |
| Source |
Oryza sativa Indica Group ORGANISM Oryza sativa Indica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 7:4926760..4932360 |
| Sequence Coding Region |
4926760..4926813,4927402..4927521,4927643..4927741,4927841..4927978,4928071..4928205 |
| Genome Context |
<gbrowseImage1> name=IndicaChromosome07:4926760..4932360 source=RiceIndica07 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=IndicaChromosome07:4926760..4932360 source=RiceIndica07 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ATGGCCGAGAAGGGTGACAATCTGGAGGCCGTGCTCAACGAGTCCGTCGATCTCGAGAACATACCGTTGGAGGAGGTGTTCGAGCACCTGCGATGCAACCGCGAGGGCCTCACCTCCGCCAATGCCGAGCAGCGCCTCAACCTCTTCGGCCCCAACAGGCTCGAGGAGAAGAAGGAGAGCAAGTTCTTGAAGTTCTTGGGGTTCATGTGGAACCCACTGTCCTGGGTCATGGAGGCCGCCGCAATCATGGCCATCGCTCTCGCCAATGGAGGAGGGAAGCCGCCGGACTGGCAGGATTTCGTGGGCATCATTACACTGCTCATCATCAACTCCACAATCAGTTTCATTGAGGAGAACAATGCCGGCAATGCCGCCGCCGCTCTCATGGCTCGCCTCGCCCCCAAGGCCAAGGTTCTTAGAAATGGAAGATGGAGTGAAGAGGAAGCAGCCATCCTTGTGCCGGGGGACATCATCAGCGTCAAGCTTGGAGATATCATCCCTGCTGATGCCCGTCTCCTTGAGGGTGATCCGTTAAAGATTGATCAGTCTGCGCTTACCGGTGAGTCCCTTCCGGTGACCAAGGGCCCTGGAGATGGAGTGTACTCTGGCTCCACATGCAAGCAGGGTGAAATCGAGGCTGTTGTCATTGCAACCGGTGTGCACACGTTCTTCGGCAAGGCCGCACATCTTGTCGATTCGACAAACCAAGTTCTGACTGCCATCGGGAACTTCTGCATCTGTTCAATTGCTATTGGAATGGTTGTAGAGATTATTGTCATGTACCCCATCCAACACAGGGATTACCGACCAGGGATTGACAATCTTTTGGTGCTTCTGATTGGAGGAATTCCCATTGCCATGCCCACTGTTCTTTCTGTGACTATGGCAATCGGGTCACACCGCTTGGCTCAGCAGGGAGCAATTACAAAGAGGATGACAGCTATTGAGGAAATGGCTGGTATGGATGTTCTTTGCAGTGACAAAACAGGAACACTAACCTTGAACAAGTTGACTGTGGATAAGAGTCTTATTGAGGTTTTCCAAAGAGGTGTTGACCAGGATACTGTCATACTAATGGCTGCCAGAGCTTCACGTACCGAAAATCAGGATGCCATAGATGCCACAATAGTTGGTATGCTTGCTGATCCAAAAGAGGCTCGTGCTGGTATTCAAGAGGTTCATTTTCTGCCATTCAATCCAACTGACAAAAGGACTGCTTTAACCTACATTGATGGTGAGGGGAAAATGCACCGTGTAAGCAAGGGAGCACCAGAACAGATCCTTAATCTTGCACACAACAAAACTGAGATTGAAAGAAGAGTCAGAGCTGTAATTGACAAATTTGCTGAGCGTGGCTTGCGATCACTTGGTGTGGCATACCAGCAAGTGCCAGATGGTAGGAAAGAAAGTCCTGGAGGACCATGGCAATTTGTTGGGCTCTTGCCACTTTTTGACCCTCCTCGACACGATAGTGCAGAAACAATCAGGAGGGCACTCAACCTTGGTGTCAATGTTAAAATGATTACAGGTGACCAACTTGCAATAGGCAAGGAAACAGCACGCCGCTTGGGAATGGGTACTAATATGTATCCCTCATCTGCTTTACTGGGACAAGATAAGGATGAATCAATTGTGGCTTTGCCAGTTGATGAATTAATTGAGAAAGCTGATGGCTTTGCTGGAGTCTTTCCTGAGCACAAGTATGAGATTGTGAAACGCTTGCAAGCAAGAAAACATATATGTGGTATGACTGGAGATGGTGTGAATGATGCTCCCGCTTTGAAGAAGGCTGATATTGGCATTGCTGTGGACGACTCGACTGATGCAGCCCGTAGTGCCTCCGATATTGTCCTAACTGAGCCAGGCCTTAGTGTGATTATTAGTGCTGTGCTTACAAGTCGAGCAATTTTCCAGAGGATGAAGAATTACACTATTTATGCTGTTTCAATTACAATTCGTATTGTGCTTGGTTTTATGCTTCTTGCTCTGATATGGAAGTTCGATTTCCCACCATTTATGGTCCTGATCATTGCCATCCTCAATGACGGTACCATAATGACCATTTCAAAGGACAGAGTAAAACCATCCCCACAACCTGATAGCTGGAAGTTATCTGAGATTTTTGCAACTGGGGTCGTCCTTGGTAGTTACTTGGCCATGATGACAGTCATTTTCTTCTGGGTAGCATACAAGACTGATTTCTTCCCGAGAGTGTTTCACGTTGAAAGCCTTGAAAAGACTGCTCAGGATGACTTTCAGAAGCTTGCATCTGCTGTCTATCTTCAAGTCAGCACAATCAGCCAGGCCCTCATCTTCGTAACTCGGTCTCGCAGCTGGTCATTTGTGGAGCGCCCAGGATTCTTGTTGGTTTTTGCTTTCTTTGTAGCTCAACTGATTGCTACTCTGATTGCTGTATATGCCAACTGGGGATTCGCTTCAATCAAGGGCATTGGATGGGGCTGGGCTGGTGTCATCTGGCTCTACAACATCGTCTTTTACTTGCCACTGGACATCATCAAGTTCCTGATCCGTTATGCGTTGAGTGGGAGGGCATGGGATCTTGTTCTTGAGCAAAGGATTGCTTTCACAAGGAAGAAGGATTTCGGCACACAAGAAAACCAGCTCAAGTGGGCGACTGCTCAGAGGACCATCCATGGGCTCCAGCCAGCCGCCACCGCGGCTGTCTTCCGCGACATGACAAGCTACAACGATCTCAACCAGCTTGCAGAAGAGGCCCGTAGGAGAGCCGAAATCGCAAGGTTGAGAGAGCTGACCACCCTGAAGGGGCGGATGGAGTCGGTGGTGAAGCAGAAGGGCTTGGATCTTGAGACCATCCAGCAGTCATACACCGTGTGA</cdnaseq> |
| Protein Sequence |
<aaseq>MAEKGDNLEAVLNESVDLENIPLEEVFEHLRCNREGLTSANAEQRLNLFGPNRLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLIINSTISFIEENNAGNAAAALMARLAPKAKVLRNGRWSEEEAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVLTAIGNFCICSIAIGMVVEIIVMYPIQHRDYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKSLIEVFQRGVDQDTVILMAARASRTENQDAIDATIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDGEGKMHRVSKGAPEQILNLAHNKTEIERRVRAVIDKFAERGLRSLGVAYQQVPDGRKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETARRLGMGTNMYPSSALLGQDKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVDDSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLSEIFATGVVLGSYLAMMTVIFFWVAYKTDFFPRVFHVESLEKTAQDDFQKLASAVYLQVSTISQALIFVTRSRSWSFVERPGFLLVFAFFVAQLIATLIAVYANWGFASIKGIGWGWAGVIWLYNIVFYLPLDIIKFLIRYALSGRAWDLVLEQRIAFTRKKDFGTQENQLKWATAQRTIHGLQPAATAAVFRDMTSYNDLNQLAEEARRRAEIARLRELTTLKGRMESVVKQKGLDLETIQQSYTV</aaseq> |
| Gene Sequence |
<dnaseqindica>1..54#643..762#884..982#1082..1219#1312..1446#1545..1706#1814..2020#2105..2224#2316..2435#2521..2643#2752..2856#2940..3084#3381..3545#3665..3903#3983..4015#4126..4207#4358..4518#4610..4795#4921..5103#5210..5391#5505..5601#ATGGCCGAGAAGGGTGACAATCTGGAGGCCGTGCTCAACGAGTCCGTCGATCTCGTACGTTCTTTGCCCCTCTGTTCATGTTCTGGTTTTGATTCCGGAGTTTTTGGGGGGTTTCTTTTAGGTGGATTTGGTTTTGATGGTGTTCTTGGTCTTTGCTGTTTGCTGTTTGTGTTCTTGATTTGTTTTTTTTTGGGAGGTGGTTTTGGTGGGTTTTGGGTTGGTGTTAGTGTTGGGGAGTGGTGGCAGTAGTAGTAATCTTTCCGCCTTGAATCATCTTCTTGATGGATTTTCTTCTTCTTCTTCTTGATTTCTGAAACTTTGTTTGATCTCTTCGATCTGGGAGGCATCATGGCCTTGGCCGGTTAGGGCATTAAGGTTTCGGTTCTTCTTCCATCCCAAGTTCTTGATTTTCTTTTTTCATCTTGCTTTTGATGATCCCATAAACAATGGAAAGTCCATCCCTTTTTCTCCGCGTATCGCTCGCTGATTCGTCTCTCGCTTTCAACGGAGCAAATCTCGTGATCTTTCATTCGGTTTCTCTCCTGAAAAAAAAAGTTTCGAGATTCTTTTTTTTTTCTCAGGATTGATTTCTTTTGATGCATGATTTTGACGGGTGTTTCTTGTCCTTCCTTCCTTCTGCAGGAGAACATACCGTTGGAGGAGGTGTTCGAGCACCTGCGATGCAACCGCGAGGGCCTCACCTCCGCCAATGCCGAGCAGCGCCTCAACCTCTTCGGCCCCAACAGGCTCGAGGAGAAGAAGGTAACCAACCCACCAAATCCGTGGTTTCTCTCCCAAGATTCAGTAGAAAGTTTATTTTCTGTTCGATGATGCAAAGTTTTTTTTTTCATGTTTGTTTGTTTTTTTATGTGTGTGTGTGCAGGAGAGCAAGTTCTTGAAGTTCTTGGGGTTCATGTGGAACCCACTGTCCTGGGTCATGGAGGCCGCCGCAATCATGGCCATCGCTCTCGCCAATGGAGGAGTAAGTAGTCTATGAATCATGATGTTTCGGACATGGCATGTGAGGTGATTGTGAGAGGTTGGATTGAATTGATGAGGGTTGATTTGTTTGGGGTTTCAGGGGAAGCCGCCGGACTGGCAGGATTTCGTGGGCATCATTACACTGCTCATCATCAACTCCACAATCAGTTTCATTGAGGAGAACAATGCCGGCAATGCCGCCGCCGCTCTCATGGCTCGCCTCGCCCCCAAGGCCAAGGTATTTGATGCCAATCTTGTCTTTTGTGCAGTTTGTGATGATTGTGTGTACACAATCTCAAGTAGTACTGACTTTTGTTTGTGGTGATGAAGGTTCTTAGAAATGGAAGATGGAGTGAAGAGGAAGCAGCCATCCTTGTGCCGGGGGACATCATCAGCGTCAAGCTTGGAGATATCATCCCTGCTGATGCCCGTCTCCTTGAGGGTGATCCGTTAAAGATTGATCAGGTGACTGCAATCGCGATAATCTCCTGATTGGTTTGGTCATATAAGTTTACTATTTTTATCTTTTGAGTTCTGACCTATGATTTGGTTCTATTGTGCAGTCTGCGCTTACCGGTGAGTCCCTTCCGGTGACCAAGGGCCCTGGAGATGGAGTGTACTCTGGCTCCACATGCAAGCAGGGTGAAATCGAGGCTGTTGTCATTGCAACCGGTGTGCACACGTTCTTCGGCAAGGCCGCACATCTTGTCGATTCGACAAACCAAGTTGGCCATTTCCAGAAGGCAAGCTTCTAGTTTCTGTTTCCAGTACTCGCCTACTGTCTTGTATTTTGCAAGTTTATAATGTGATAAGCATCTGTTTCGCTGTCCAGGTTCTGACTGCCATCGGGAACTTCTGCATCTGTTCAATTGCTATTGGAATGGTTGTAGAGATTATTGTCATGTACCCCATCCAACACAGGGATTACCGACCAGGGATTGACAATCTTTTGGTGCTTCTGATTGGAGGAATTCCCATTGCCATGCCCACTGTTCTTTCTGTGACTATGGCAATCGGGTCACACCGCTTGGCTCAGCAGGTATATATCTGGACAATTCTCTCTGAAGTGAAAATATATGTTTCTTGGTCTGTTTCAGCATTACAATATTGCATATTGGTGTAGGGAGCAATTACAAAGAGGATGACAGCTATTGAGGAAATGGCTGGTATGGATGTTCTTTGCAGTGACAAAACAGGAACACTAACCTTGAACAAGTTGACTGTGGATAAGAGTCTTATTGAGGTTAGGAATTTGATATATTTATTTACATAATCTAGCTCTTTGATTATTTCTGATAATCACACTCATCTGAAAACGTTTTTGACTGAATCAGGTTTTCCAAAGAGGTGTTGACCAGGATACTGTCATACTAATGGCTGCCAGAGCTTCACGTACCGAAAATCAGGATGCCATAGATGCCACAATAGTTGGTATGCTTGCTGATCCAAAAGAGGTATATCAGATGCATTTTCAGTTTTGCTATGTACAGCTTTTCTTCTTTTATTTTTCCTTCTTTTCTTACTTTGTTTGGTGAAAAGGCTCGTGCTGGTATTCAAGAGGTTCATTTTCTGCCATTCAATCCAACTGACAAAAGGACTGCTTTAACCTACATTGATGGTGAGGGGAAAATGCACCGTGTAAGCAAGGGAGCACCAGAACAGGTACTTATTCATTTACATATATTGGGAGCTTCATGTTTGTCCACATGTAACTTATATCTCATCAATTTACTGTGGTAATTTGACTTACTGATTATGGAACATCAACAGATCCTTAATCTTGCACACAACAAAACTGAGATTGAAAGAAGAGTCAGAGCTGTAATTGACAAATTTGCTGAGCGTGGCTTGCGATCACTTGGTGTGGCATACCAGGTCTGGGATCACATCGCCTTGTAATATACACAGTTAGCCTGTTACTTACCTTCTTACTTGGCTGACTGAACATTTTTATACAGCAAGTGCCAGATGGTAGGAAAGAAAGTCCTGGAGGACCATGGCAATTTGTTGGGCTCTTGCCACTTTTTGACCCTCCTCGACACGATAGTGCAGAAACAATCAGGAGGGCACTCAACCTTGGTGTCAATGTTAAAATGATTACAGGTCTGTCCTATTTCAATTCAATGCGCTCTCTGTTGATTATTTTAAATGAAGAGTTCTTGTTCTGGCTTCTCTGGAATCTTGCTATTCTGTTGTTTGTAAATTAGTGAATCTAGTGATGCATGTTTGCAGATTGGACTAGTACTGGAATGCTGATTGAATTTTAGTTTTTAGCTATTTTGATTGGTCTAGGAAAAGCCAAGTAAATTATTTGGAGCTCATCTATTTCAGTGGGATTTTATCTTGAGTTTGAGTTGGTCTAGTTACATAAGTGCAAAGTTTTTTGTAATATTTTTCAGGTGACCAACTTGCAATAGGCAAGGAAACAGCACGCCGCTTGGGAATGGGTACTAATATGTATCCCTCATCTGCTTTACTGGGACAAGATAAGGATGAATCAATTGTGGCTTTGCCAGTTGATGAATTAATTGAGAAAGCTGATGGCTTTGCTGGAGTCTTTCCTGGTACGACTTTGGAGATAATATGTTATTAGAACCGTACTATTTTTCATTGGCTTAATTATATTTGTCAACATTTATTTTCAGTACTTATGTGTAGTTTTGCCTTTACTATCATCTAACAGAGCACAAGTATGAGATTGTGAAACGCTTGCAAGCAAGAAAACATATATGTGGTATGACTGGAGATGGTGTGAATGATGCTCCCGCTTTGAAGAAGGCTGATATTGGCATTGCTGTGGACGACTCGACTGATGCAGCCCGTAGTGCCTCCGATATTGTCCTAACTGAGCCAGGCCTTAGTGTGATTATTAGTGCTGTGCTTACAAGTCGAGCAATTTTCCAGAGGATGAAGAATTACACTGTAAGCCATTACTGCAGTTCCTTCGCCAATGAAGTCATTGTCTTTTCAGATTCTAAATTGTTTTTTTTCCTGCTTGCAGATTTATGCTGTTTCAATTACAATTCGTATTGTGGTAAGTATTTGTTCCTTATATGTTCGACTGTTTTCTTAATCATGTACTTATTATTTATTGACTGCATGGACAAATAACTCATTATATTGCGACTCATTTTCTTGTAACAGCTTGGTTTTATGCTTCTTGCTCTGATATGGAAGTTCGATTTCCCACCATTTATGGTCCTGATCATTGCCATCCTCAATGACGGTTAGTATCTTTCAGCTGATTTCATGACAAGATTTAAACCTGCTACAGTTGATCATTCTTTTGTCTTGCTCATGTATATGCATAAATATCTCAAATCTAATAAGTACTATATTAGGTCACCTAACTACCAGTACCTTTTGATATGAACAGGTACCATAATGACCATTTCAAAGGACAGAGTAAAACCATCCCCACAACCTGATAGCTGGAAGTTATCTGAGATTTTTGCAACTGGGGTCGTCCTTGGTAGTTACTTGGCCATGATGACAGTCATTTTCTTCTGGGTAGCATACAAGACTGATTTCTTCCCGGTACTGGCCAGTACTGTACTGAGTGTTTTTATTGCATAGTTTGTGGTCATACTTGTTTTGCTCATCCTTGGATTTCTTGACTAATTTTCAGAGAGTGTTTCACGTTGAAAGCCTTGAAAAGACTGCTCAGGATGACTTTCAGAAGCTTGCATCTGCTGTCTATCTTCAAGTCAGCACAATCAGCCAGGCCCTCATCTTCGTAACTCGGTCTCGCAGCTGGTCATTTGTGGAGCGCCCAGGATTCTTGTTGGTTTTTGCTTTCTTTGTAGCTCAACTGGTAAGTGATTTCACCATCTCCCATCAGATTCATGTCCATCTTAACTAGTGTATATTACTTGATACGATTCGTCTTCTTGTGGTTTACTACTTTGTTGCTCACATTCTTTTCCTTGCTACCACCAGATTGCTACTCTGATTGCTGTATATGCCAACTGGGGATTCGCTTCAATCAAGGGCATTGGATGGGGCTGGGCTGGTGTCATCTGGCTCTACAACATCGTCTTTTACTTGCCACTGGACATCATCAAGTTCCTGATCCGTTATGCGTTGAGTGGGAGGGCATGGGATCTTGTTCTTGAGCAAAGGGTAAGAACATAAATTGACATTTCTCGACATGCAACATTGTATTCATTATCTAAAAGATGCAAATATTGTATTGTGCTCATCTGTTATCGGTGTTGTGCACACGCAGATTGCTTTCACAAGGAAGAAGGATTTCGGCACACAAGAAAACCAGCTCAAGTGGGCGACTGCTCAGAGGACCATCCATGGGCTCCAGCCAGCCGCCACCGCGGCTGTCTTCCGCGACATGACAAGCTACAACGATCTCAACCAGCTTGCAGAAGAGGCCCGTAGGAGAGCCGAAATCGCAAGGTATGTACAAGCAATGCCATTGCCCATGACAACCTTGAACAATCAACAACAGCTCAACCCTCCCTGCTGCAGTAGCTTAGCTGAAATCTGAATTCGGATTTTCGTCGTCTCAGGTTGAGAGAGCTGACCACCCTGAAGGGGCGGATGGAGTCGGTGGTGAAGCAGAAGGGCTTGGATCTTGAGACCATCCAGCAGTCATACACCGTGTGA</dnaseqindica> 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| External Link(s) |
