Difference between revisions of "BGIOSGA026004"
(Created page with "{{IndicaGene|
GeneName = BGIOSGA026004|
Description = Succinyl-coa ligase alpha-chain 2|
Definition = Oryza sativa Indica Group BGIOSGA026004, complete gene.|
tag = |
tid...") |
|||
| Line 1: | Line 1: | ||
| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{IndicaGene| | {{IndicaGene| | ||
GeneName = BGIOSGA026004| | GeneName = BGIOSGA026004| | ||
Revision as of 17:00, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
BGIOSGA026004 |
|---|---|
| Description |
Succinyl-coa ligase alpha-chain 2 |
| Definition |
Oryza sativa Indica Group BGIOSGA026004, complete gene. |
| LocusTag |
' |
| Ensembl Transcript ID |
BGIOSGA026004-TA |
| Ensembl Protein ID |
BGIOSGA026004-PA |
| Length |
4943 |
| Source |
Oryza sativa Indica Group ORGANISM Oryza sativa Indica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 7:21451226..21456168 |
| Sequence Coding Region |
21451226..21451735,21453413..21453622,21454054..21454224,21454302..21454425,21454912..21454973 |
| Genome Context |
<gbrowseImage1> name=IndicaChromosome07:21451226..21456168 source=RiceIndica07 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=IndicaChromosome07:21451226..21456168 source=RiceIndica07 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ATGGCGCTCGTCTCCGCCTCCTCCTCCACCACCGCCGTCGCGGCGCTCCCCGGCGCCGCCAGGGCCTCCTCCTTCCTCGGCGGCGCCGGCAGGAGCGGCAGGCTGCTGCTGAGGCAGGCCGAGTCGTCGTCCGCGCGGGCGTCGTTCGCCGTGCGCGCCGCGGCGCCCGACAGGCCAATCTGGTTCCCCGGCAGCACCCCGCCGCCGTGGCTCGACGGCAGCCTCCCCGGCGACTTCGGCTTCGACCCCCTGGGTCTCGGATCGGACCCGGAGAGTTTGCGGTGGAACGTGCAGGCGGAGCTGGTGCACTGCCGGTGGGCGATGCTGGGCGCGGCGGGCATCTTCATCCCGGAGTTCCTGACCAAGATCGGCATCCTCAACACGCCGTCGTGGTACACCGCCGGCGAGCAGCAATACTTCACCGACACCACCACCCTCTTCATCATCGAGCTCATCCTCATCGGCTGGGCCGAGGGCCGCCGGTGGGCTGACATCATCAAGCCCGGCTGCGTAGGTGGGGTTACCCCTAAGAAAGGTGGAACCGAGCACCTAGGCCTTCCGGTGTTCAACTCTGTGGCAGAAGCTAAGGCTGAGACAAAGGCGAATGCATCTGTTATATATGTTCCACCACCATTTGCTGCTGCTGCAATAATGGAAGCGATGGAGGCCGAACTTGACCTTGTTGTCTGCATTACCGAAGGGATACCTCAGCATGACATGGTGAAAGTGAAGGCTGCTCTGAACAAGCAATCAAAAACTCGGTTGATTGGACCAAATTGCCCTGGTATCATTAAGCCGGGTGAATGTAAAATTGGAATCATGCCAGGTTACATCCACAAGCCAGGTCGTGTTGGGATAGTATCTCGCTCTGGTACCTTGACATATGAAGCGGTGTTTCAAACAACAGCCGTAGGCTTGGGGCAGTCAACGTGTGTTGGCATTGGTGGTGATCCCTTCAATGGCACGAATTTTGTTGATTGCCTTGAAAAGTTTGTTGATGATCCTCAGACAGAAGGTATTGTTCTCATCGGAGAAATTGGAGGTACTGCTGAGGAGGATGCTGCAGCCTTCATTCAGGAGAGCAAAACACAAAAGCCTGTTGTTGCATTCATAGCTGGACTCACTGCTCCACCTGGGCGTCGCATGGGTCATGCTGGAGCAATTGTGTCAGGGGGCAAGGGTACGGCACAAGACAAAATCAAGGCTCTCAGAGAGGCTGGGGTTACTGTTGTTGAGTCACCAGCGAAGATTGGTTCAACTATGTTCGAAATTTTCAAGCAACGCGGAATGTTAGAATAG</cdnaseq> |
| Protein Sequence |
<aaseq>MALVSASSSTTAVAALPGAARASSFLGGAGRSGRLLLRQAESSSARASFAVRAAAPDRPIWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGEQQYFTDTTTLFIIELILIGWAEGRRWADIIKPGCVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFAAAAIMEAMEAELDLVVCITEGIPQHDMVKVKAALNKQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCLEKFVDDPQTEGIVLIGEIGGTAEEDAAAFIQESKTQKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALREAGVTVVESPAKIGSTMFEIFKQRGMLE</aaseq> |
| Gene Sequence |
<dnaseqindica>1..510#2188..2397#2829..2999#3077..3200#3687..3748#4119..4200#4804..4943#ATGGCGCTCGTCTCCGCCTCCTCCTCCACCACCGCCGTCGCGGCGCTCCCCGGCGCCGCCAGGGCCTCCTCCTTCCTCGGCGGCGCCGGCAGGAGCGGCAGGCTGCTGCTGAGGCAGGCCGAGTCGTCGTCCGCGCGGGCGTCGTTCGCCGTGCGCGCCGCGGCGCCCGACAGGCCAATCTGGTTCCCCGGCAGCACCCCGCCGCCGTGGCTCGACGGCAGCCTCCCCGGCGACTTCGGCTTCGACCCCCTGGGTCTCGGATCGGACCCGGAGAGTTTGCGGTGGAACGTGCAGGCGGAGCTGGTGCACTGCCGGTGGGCGATGCTGGGCGCGGCGGGCATCTTCATCCCGGAGTTCCTGACCAAGATCGGCATCCTCAACACGCCGTCGTGGTACACCGCCGGCGAGCAGCAATACTTCACCGACACCACCACCCTCTTCATCATCGAGCTCATCCTCATCGGCTGGGCCGAGGGCCGCCGGTGGGCTGACATCATCAAGCCCGGCTGCGTCAACACCGACCCCATCTTCCCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGAGGGACTCATCCCCTTTTTCCTTCTTCAGCACTCTCTTCCTCCTCTTCCCCCCTTCCTCTATCCTTCTATCAACGGTGATCTAGTAGGGTAGGGTAACTTGGGTCCATAGACAAAGGCAGAGTATATTACGGGGTGCCAAGGAATCTGGTCATGAAACTTAGACTCCATATTAGCTTAAATTCGATCTAAAGTAGAGTAAATTAAGTAAGTGGTACTCATTTCATTTCGTTTTAGCTCCGCCCCCTGTTGAGTCCTCCCAACATCCATGTTGGATCCGCCCCTAGAGGTAGGAATGGAAATGGTCGGAAACAATATTATTTTTTATTATTTTTATGGAAATGGTATCGTTGGAATTTTTTCTATATTTATGAATTTAAGTAATGGCAACTTTAATATGATGAAGATGAAAAGCTAAATTTTATAGAAAAAAAGTAAGAAATGATACCAATTTTTTTTACAAAAATAGGATTGGCATGGTCGAAAAATTTCCACATTATTTTCATCGCTAGGAGATACCTATGACTTTACCACCAAATCATTAGAAGGAAAAAAAAAGAAATATCGTGAATTACATGTCAGGTTAGGTGTAATTTGATCCAACGAATTACAAGAAGATTGAAAAACCTCAAACTTCTTGGTAGGTCATACATTGACAACCCCATGGAATGATGGAAAGGCATTATATCGAGACTTTGGAATATGACAACTCATATCTGGGTAGGAATAATAAATTTGAAGGAAAATGAAGTAGAGGGACTAAGGGAGAGAGGAAGATTCCTTTTCTTTTTGGTCTTTGTGAGGGAGGAATCATCCTTGTATGGTCTTTACAATTGACTTCCATGTCTCTCATATACTGCCCCCGTTTCAAAATGTTTGACACCGTTGACTTTTTAGTACGTGTTTGACCATTCATCTTATTCAAAAAATTTAAGTAATTATTTATTCTTTTCATATCATTTGATTTATTGTTAAATATACTTTCATGTACACATATAGTTTTACATATTTCACAAATTTTTTTAATAAGACGAACGGTTAAACATGTGCTAAAAAGTCAACGATGTCAAACATTTTGAAACGGAGGGAGTATATTCCTTATTATTTTCCAATGAGAAAAAAATACAATAACAATCAGAAAAAGCATAATTTGGAGTTCTATATTTTTATCATCACGATAATAGCGACAAATACAAGGGTCTAGGTGGAAAGTTTGACCACCCAACTTCCCCTGCAAGAATGGATCGCGAGGAGACCCCAGAAAAGTAAACAAAAACGGAGGAGGAGCGCACTCGCCCAAAAACCCCAAACGAAATCGAATCGAGAGGAGAAAAGGGGCACGCGCCGCCGCCGCCGCCCGCCGCTGCCACCACCAGCCACCCACCATGGCCGCCTCCGCCCGCCGCGCGTCCCAGCTGCTGGGATCCGCGGCCTCCCGCCTCCTCCACGCGCGGGGCTTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTTATGGAAACAAAAGTAATTTGACTGATTAGCTGTCGTGTACTTTTTTTACCCTATTTAATTGAAGTACTTCTCACAATAACAGGTAGGTGGGGTTACCCCTAAGAAAGGTGGAACCGAGCACCTAGGCCTTCCGGTGTTCAACTCTGTGGCAGAAGCTAAGGCTGAGACAAAGGCGAATGCATCTGTTATATATGTTCCACCACCATTTGCTGCTGCTGCAATAATGGAAGCGATGGAGGCCGAACTTGACCTTGTTGTCTGCATTACCGAAGGGATACCTCAGCATGACATGGTAATTTACAACAATTTCAGCATGCCATTAATATGATGTTTCTTTCCGTGCATGATGATTCCCAAATGTTTTCTCTTCATCATAATTGTACACAGAAGCTAGAAAAAAAATTAGTGAGACCATTGGAAATAACATACATGATTATTTTCATTTTATTCAAGTGGCTGTACACACGACACATATAAATAAGAGATTTTAGCTGTCATTAGTTTCAGCATGACCACCGATCAGTTCAATTGCAGTGGTGTCAATAATCTTTTGAGCTGGTAATCTGTTTTTCCTTAAAACAGTGTTATCAATCATGCTGTTTCATAGTTGGTCGTTCTTTACTCTTTCCTATATTTTAGATTATCTCAGTTCTATTTTTACTTGCCTTTTGTCAAAGGAAATTAATGAGGTGACCCATTTAAATGTTTCTTTGTAACTTTCAGGTGAAAGTGAAGGCTGCTCTGAACAAGCAATCAAAAACTCGGTTGATTGGACCAAATTGCCCTGGTATCATTAAGCCGGGTGAATGTAAAATTGGAATCATGCCAGGTTACATCCACAAGCCAGGTCGTGTTGGGATAGTATCTCGCTCTGGTACCTTGACATATGAAGCGGTATGCACATCAATTTTAGTGTGGCTAACAATCTGTGAATACATTTGCCTAAGGTGTATTTCTTTCTTCACTGGCAGGTGTTTCAAACAACAGCCGTAGGCTTGGGGCAGTCAACGTGTGTTGGCATTGGTGGTGATCCCTTCAATGGCACGAATTTTGTTGATTGCCTTGAAAAGTTTGTTGATGATCCTCAGACAGAAGGTACGCTGTCTGTGACTGGCTGACTGAGGTTGCACAATATTAATTCAAATTGTCCTTAGTTTGCTATGTTCTGCTTTACCTCTAGCCTCTCAGTTAGATCTGCATGTTTAGTTTTAAGTTCAATATTCTACTTGCTTTTGTATTTGACAATAATTTATTGGACAGGCTTAATCTTGATTTTCATTGTATACCATCAGTTACCCTGTATATGCCAACCTAGTGATTTTTCACAATTGTTTGCTCTGACTTAGTTGAATTTATCAGGATAAGCAAAATGGATTGTATATGGAAAACAGAGCTCCTGCTTTTTACAATTTTCTTTATCTTGACTTTGTATTTCTTTATCATTAATCCCACATATTAATTAGTTAAGGGACTGAGGTTTCTAACAATTGTTTACTAGAGTCACGGAGTTAGGCAGTATCATTACTACTAGGTGGGTGACAGAATGAATATCATTGGTAACTGTTTCCCTGTGCCTATTAGGTATTGTTCTCATCGGAGAAATTGGAGGTACTGCTGAGGAGGATGCTGCAGCCTTCATTCAGGTTTGTTTGTTGGGAATCAGGATTTCGGCTATCAATAGTAATTTGGATAACCTCTTATGTACATGTCCTATTAACCTTTGTCACTATTAAAGTTATTCACAATAGTTCGGTTTCAACTTTCAATAAACTCAAGCGGTCTTGCTGTCTTATGATAAATGCAACAAATTCAGTTTTCAACTTTTTGTTATGATATGAAATGACTCGAGGACTGTACATGTCCAGGTACTAAAGTGACAGATGAAGTCAATCATTGCTAATACTATTGTGTGTGTCCAGTTGCATGATTGCTGAAAGTTACATTTTTATGTGTTTTAATATTAGATGAGCAATAACATATCAACTTACTGAAGTTGACATGCAATTATTTCAGGAGAGCAAAACACAAAAGCCTGTTGTTGCATTCATAGCTGGACTCACTGCTCCACCTGGGCGTCGCATGGGTCATGCTGGAGGTATTCACTTAATAAGTTTTTTTTATTTGATTTTTCTTTTGCGATTCATGCTTTTCTGGATTATGCATATTCTTTTCTCCATTCAATCAATTGTACAATCTTGAGTTGAAACAAATGCTCCTGGGACTCTTACTGTCGCTAGACTACATTTTATGATTATTAGCAAATACTGATAAGTAAAGAAATACTAAAATTCCACAGATTTTACTATGAAAGATTCACTGGGTCGAATGTGGTATTGGTTCACGATCAGTAATATATGAGAAATGCATACTTCATTCTTCCAACCAGTATGGACATTTATACAGTTCGAAACCGGTGGTTTTGGACCAGATTTTTAGTTGCATCGGATTCTATCGTGCCTTAGCCTTCCATCTCCTATAACGTGGTTAACATTATGTATGACACCATGATCAAGTACTATGGTAGCGGTCAGCAAAGTTTGATTCCTACTCCTAAAACATGGTTAACATTATGTATGACAGGATATGAATCCCAATTTTTCCATAAAAAATGTTTGTTGATATACATTCTCTTTTGTCGTTTTAAATCAAGTTCAGCTATTGCATGTACTAATCTACTTTCACTCTTCTCTTATGGCAGCAATTGTGTCAGGGGGCAAGGGTACGGCACAAGACAAAATCAAGGCTCTCAGAGAGGCTGGGGTTACTGTTGTTGAGTCACCAGCGAAGATTGGTTCAACTATGTTCGAAATTTTCAAGCAACGCGGAATGTTAGAATAG</dnaseqindica> |
| External Link(s) |
