Difference between revisions of "BGIOSGA027954"
(Created page with "{{IndicaGene|
GeneName = BGIOSGA027954|
Description = cDNA clone:J033050O03, full insert sequence|
Definition = Oryza sativa Indica Group BGIOSGA027954, complete gene.|
ta...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{IndicaGene| | {{IndicaGene| | ||
GeneName = BGIOSGA027954| | GeneName = BGIOSGA027954| | ||
Revision as of 17:10, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
BGIOSGA027954 |
|---|---|
| Description |
cDNA clone:J033050O03, full insert sequence |
| Definition |
Oryza sativa Indica Group BGIOSGA027954, complete gene. |
| LocusTag |
' |
| Ensembl Transcript ID |
BGIOSGA027954-TA |
| Ensembl Protein ID |
BGIOSGA027954-PA |
| Length |
8441 |
| Source |
Oryza sativa Indica Group ORGANISM Oryza sativa Indica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:2171084..2179524 |
| Sequence Coding Region |
2171084..2171096,2171191..2171282,2172630..2172803,2172890..2172963,2173553..2173633 |
| Genome Context |
<gbrowseImage1> name=IndicaChromosome08:2171084..2179524 source=RiceIndica08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=IndicaChromosome08:2171084..2179524 source=RiceIndica08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ATGTACGGCGGCGATGAGGTCTCGGCCATCGTCATCGACGTGGGGTCCTACAGCTGCAAGGCGGGGTACGCCGGTGATGACACCCCCAAGGCCGTCTTCCCCTCGGTTGTTGGTTCAATTGAGCAAACGGGAGAAACTGATGAAGCAAAGGCAGACAAGGAGGCTGAAGCTGCATCAGATTCTAAGAATGGAGCCAAACCTATGGATGTGGACAAAGCCAAGACAAAGCGCAAATTGTATGTTGGTCAAGAATTGGAGTTCAGGAGGGATCATATGGAGGTGATTTCACCAATGAAAGATGGAACAGTTACTGATTGGGATATTGTTGACAATATATGGAATCATGCTTTCAGGCAGCGGCTATTGATCAATCCTGAGGAGCATCCTATGTTGATAGCTGAACCATCTACAAACACAGGGCAGCAAAGAGAGAAAGCAGCAGAACTTATGTTTGAGAAGTACAAAGTGCCGGCACTGTTCCTAGCGAAAAATGCAGTTCTCACATCTTTTGCATCTGGACGTGCTACATCGTTGGTAGTTGACAGCGGTGGTGGGTCTACTGTGGTTGCTGCTGTTCACGATGGTTATGTATTGCAAAAGTCTGTGGCGACTTCTCCAATTGGTGGTGAATTTTTAACTGACTGTATGATGAAAAGCTTGGAGAGCAAGGGCGTTGTTATAAGGCCCAGGTATTCATTCAAGAAGAAGGAAGTCGGCCCTGGCGAATATAAGGTTGTAGATCTTGATCTTCCAAACACAACGGAGAGTTACAAGTTATACTGCATGAGAGCTATTGCTAGTGATATCAAGGAGTCAGTTTGCAGGGTTCCAGATACTGCCTTCGATGAAGTGGCATATGCAAACGTTCCTACAACTTCATATGAGCTTCCAGATGGACAAACCATTGAAGTTGGTGCAGACAGATTCAAGATTCCTGATATTCTGTTTAATCCATCTCTTTCTCAGACTATTCCTGGAGTTGATGGATTTGCAGATTCAATGTCAGTTCGTGGCCTTCCACGAATGGTCATTGATAGTGTAAATAGGTGCGATGTTGACATTCGCAAGGAACTGCTAAGCAGTATTCTGCTTTCAGGTGGTTCATCATCAATTCTGCAGTTGAAGGAGAGGCTAGAAAAAGAAGTACTTGAGGAATCTTCTGGTAATACTCGTGTAAAGGTTTTGGCAAGTGGAAATTCAGTAGAGAGGCGATTCAGTGTTTGGATTGGAGGGAGCATTCTAGCATCCCTTGGGTCGTTCCAGCAAATGTGGTTCTCCAAAGCAGAATACGAAGAACATGGAGTATCTTACATCCAAAGGAAGTGCCCATGA</cdnaseq> |
| Protein Sequence |
<aaseq>MYGGDEVSAIVIDVGSYSCKAGYAGDDTPKAVFPSVVGSIEQTGETDEAKADKEAEAASDSKNGAKPMDVDKAKTKRKLYVGQELEFRRDHMEVISPMKDGTVTDWDIVDNIWNHAFRQRLLINPEEHPMLIAEPSTNTGQQREKAAELMFEKYKVPALFLAKNAVLTSFASGRATSLVVDSGGGSTVVAAVHDGYVLQKSVATSPIGGEFLTDCMMKSLESKGVVIRPRYSFKKKEVGPGEYKVVDLDLPNTTESYKLYCMRAIASDIKESVCRVPDTAFDEVAYANVPTTSYELPDGQTIEVGADRFKIPDILFNPSLSQTIPGVDGFADSMSVRGLPRMVIDSVNRCDVDIRKELLSSILLSGGSSSILQLKERLEKEVLEESSGNTRVKVLASGNSVERRFSVWIGGSILASLGSFQQMWFSKAEYEEHGVSYIQRKCP</aaseq> |
| Gene Sequence |
<dnaseqindica>1..13#108..199#1547..1720#1807..1880#2470..2550#2929..2989#3060..3109#3901..3955#4222..4299#4380..4433#5324..5377#5467..5527#5851..5902#6740..6806#7015..7074#7168..7230#7374..7436#7959..8023#8242..8310#8396..8441#ATGTACGGCGGCGGTAAGTTCCCCCCTCTCTCGCCCCCGTCCATCCCCGAGCTAAACCCTAAACCCTAGAGATCTGTGGCACTGGCGCTGCTTGGTTTTTTTCGCAGATGAGGTCTCGGCCATCGTCATCGACGTGGGGTCCTACAGCTGCAAGGCGGGGTACGCCGGTGATGACACCCCCAAGGCCGTCTTCCCCTCGGTGAGGCAGAATGCTTCTTCTTCTTCTTCTTCTTCTCCCCTCCTGGGTTGGCTCGCTGTAATTCTGTCTCGGAGTTGGAACTGTGTGGTCCGTGTTTTGTTGGTGAGAGTTCGTGCGGGTGGTGTCATGGAAATGATAGGGCTCTGTGCGCAATGCAATCCCACTGGCAATTTTGTGTGTTTTCTCCCCATAATTTTGAGCTGTTTTAGGTCGTTGACTTTGAATTCTGATTTGAAAAAAAAAAGAATGATGTGTTAGTGTGTGGCGTCATGATATACAGACATATGTTTATTATTTAGGTCAAGCTGTGAATTTTGCTGCGTGCATTAGTTCCTCCTAGGTCCCCAGCCACCTGATTAATGGTTTTATTCGAGCACTGGATCTTAGTCTGGGAACATGAATAACAGCAGTTTTTTTTTTTAAAAAAAAATGTTAGTAGCAGGCTAACTCAGATATTGGATAGTACCACAGATAAGACCTGCACTTACCTTTTGATTTTGACATATGCGTGCAAAATTATGATGTATTGACTGCATTGTTAGTTTACCTTTCAGCTTTGTCTTAGCTGCAAACCTGTGCCATTGCTCGCATAGGTAGTAGTTAGCAGTGTTGCATATGTGCACTGAGAGTCAAATGCCAAACTGAATTTTTAAAGTGCTAAAAGAATCTGCATTGTGGTTTCTGTGGAATTGCTACATGTTGGTACTAGACGTTAACTTCAAATGCTATGACAGGTGAACTTCTGGTTACTGTGTTTGTAACGGGAAGTACTTTTCTTGTGTATTATGTCAAATAGGATTGTACTCTTTCTGTCCCAAAATATAAGTATTTCTAGAGTTTTGCACGGGTATTAAGGAAGTAGGTGGAATTAAATGGGGGATATGATTTTTTTGATTGGTTGAGATGAGGAAGTAGGGGGTGAAGTTACTATATTTTGGGATGCGGTATTTTTTTTTCTTAGGTTCTACAGTATTATTTTTAAAAAAAATTTTCTTCCTTTAGTTAACAGACTTATATTGGGGTAATTTGAATTCTTGGAGTAGATTGCTAATTTCTCTTTGTTGCTGAGGAAGTGAGAAAACATATAATTTAGTGACATATAGCAAAACAATCAGCTGTAAGGTACTAAAAAGTGGTGTGTGAATCACACAGAAAAAGTGTTTTTGAGTTTCACTATTTGATGTCGCTGCTAATAGATTAGCATATTTTCTTCTCCTTTTTCTACATAACGTGGCAGTAGTTGCAAGATATGTCATTGGTTCATGGGATTATGCATCTGAGCTACCTAATGGTTAATTTGGTTTTAGAAGTTCTTACTGTGGTTGGTGCACATTCTGTTGTGTTAAGGTTGTTGGTTCAATTGAGCAAACGGGAGAAACTGATGAAGCAAAGGCAGACAAGGAGGCTGAAGCTGCATCAGATTCTAAGAATGGAGCCAAACCTATGGATGTGGACAAAGCCAAGACAAAGCGCAAATTGTATGTTGGTCAAGAATTGGAGTTCAGGAGGGATCATATGGAGGTTAGTTTATGCAGATTCTCAAGTATCAATATTGATGCTCATGATTTTGTTAACTATTGTTTACTGATTCTCTTCCTACCCAATAGGTGATTTCACCAATGAAAGATGGAACAGTTACTGATTGGGATATTGTTGACAATATATGGAATCATGCTTTCAGGTGAGTTTAACTATCTATTTGATGTAGATCTGAGTAATGTCGTGCCAAAAGTGCGCGCTGAAAGAGCTGGCCACACTTGTGGCAAAACTTGACTAGAAAATAAATATCTGACATGCGGGGCACTTGAGTAACAAGGTTTGGCACATTGCTTGTGTGGTTTGCCAAACACTTGCCAGTTGCTGCAAAAGGCCAAACATGCCTTCCTTGATTCTGGGGAAGTTTGGGATGAACCATACTCTCTATTTAACATAGTTTGCTTAGAATCTGCAACAAAGTTCATCTTCTAGGCCTCTAGGGCATCTTTTGGATGTCAACATGGTTACTGCTTTATGCCATTGCCCACCATCTTTTTACCTTACATATTAATATTGTGCTTTTCAAATATACTGATAGTGAAATTCCTTCTTACGTGTACAAACTGGATAAGGCTTTCCTTCTTGGGTTATTTACTTTTATTGGATTCTGTGGCATCTCTATTAGCTAACATTGATTAAATACTAGGATTTCCTCTATATGGTGTGGATATGCAACTATTGAAGTTTCTGCTTTGTTAGCTTTTATCTTCACACTGACTTGCTCTACATTTCAGGCAGCGGCTATTGATCAATCCTGAGGAGCATCCTATGTTGATAGCTGAACCATCTACAAACACAGGGCAGCAAAGAGAGAAGTATGCCTATATGTTCTGTATTTAAATTAATTGTGTTGCTAAGTTGCGTCAAACCTGAAAAACATTGCTTGTTATATGAACTAGCTGATTTATAGCACATTTATCTTCCATGACTCTTATCAGTCATGAGAACTGTATTGGTACCAGGATTTACTGCATGCTTTTCTACTTCTCCATTTAATGTCAGAAATGTTAGTTTTTCTGTGTTTCTGTACTTCAGGAATGGACAAATATGGAATTGTTGATCACCCTGTAAAACTTATAAATACCAATAAGCACAAGCTGAGATGATATGAATCCGAGTTATATCTATTCATTGCCTATTATTTTTGTATGGTTCTATGAAAAAGACCTGACTGTTTTTCTCATGTTCCATAGAGCAGCAGAACTTATGTTTGAGAAGTACAAAGTGCCGGCACTGTTCCTAGCGAAAAATGCAGTATGTATTTGTCAAAAGTGATAATTCGTGTAATTAGTTTATTAGTTCTAATTGTTGATTTGGTTGTCAGGTTCTCACATCTTTTGCATCTGGACGTGCTACATCGTTGGTAGTTGACAGGTGAGCATGTCCTTAATTAAATTTTATTTCTGCAGCTGTAACTTACTGTCTCCTTGTAGATAAAATGTTTCATTTAGCCTTAACTTATAAACAAATGCATTATAACTTTTGAATTCTGAAATATTTTTCCACCAGTAAGTGTTAGGGCGTTAGGCACAGTGCACAAATATTGGGTGTATCTTACCTTGTCTATCCTCCTTAGAATATGATGACAAATGTCCATGGAAGTAGAAAATGGCTGTTATATCAAAGTCAATCTGTCATGCACAGTATTTCAAATATAAAACCAAACTACACATAGACAAACAAGACAAATCCTGTTGAAACTGAACTTAGAAATCAAAAAGCAATTTTTAATGACCATCTGCATCATTTTTTATGAAGGATGCACTTGCATCCAAGGGTGGAAAGCGAGAAACACTATCCTTGTCTGTTCTGTCAATCCCACTTCCCACACCATTCAAGAATCAGGACATCAATATTTTCTTTACTGGTCATCAATATTGTACTTGAGTTGATTGATGCTCTTCTTTCCCCCTTTACTGTATCATAAATTCCTAACATCATCTTGGTATAGGGTGTAAGCATAACCATCTAAATTCTTTCAGCATGTTTTAAGCCATTGTATCTGATTGTCTCAAATTTGATGCCTGACATGTCCACCGATGTCTCTATTGGACTTTAATGGTGTCAAGCATTTTATGACTTATTTCATTTTTTTTCTCATGGCTTTTGGGCTTTGTTATGAGAAACATTACTGGAATGAGACAATGTTGTCATTTTTTGTGCAGCGGTGGTGGGTCTACTGTGGTTGCTGCTGTTCACGATGGTTATGTATTGCAAAAGGTATGATCTACTATTTAATACTGATTGTCAAGGCAAAGTGCATAATGCACTACTTGCATGTGTCTAATTAGTTATTTTTACCCTTTTTATTCTCTACTTTCTCATCTGAAAACTGGGAATAAGGGAATCTTCTTTTAAGACAATAAGTTTCTTTTTCTTGTTTTACATGGACGCTTGCTCACATAACATGGACAGCACTCTCACCTTGCCTCTCAGGAAGTCTACTTTTTTTCCCCTACTTGTTGCTAACTTATTTCATGTTGCAGTCTGTGGCGACTTCTCCAATTGGTGGTGAATTTTTAACTGACTGTATGATGAAAAGCTTGGAGAGCAAGGGCGTTGTTGTAAGCATCTCTCTTGCTTAAGATAGCATACTAGTCTTCTTGTATGTTCATATCCAATTTGTTCAATGTTCAATTTGCAGATAAGGCCCAGGTATTCATTCAAGAAGAAGGAAGTCGGCCCTGGCGAATATAAGGTCTAGTTTATTTAACACTTCGTTGATATTCATATTTTTTCCCTGAGAGCTACAAAGTTGACTGTTTAAGCTTACCTTTTGGTTGAAAATCAACTATAACAATATATGCTTAGCTATTGGTATGTTCGAAATTAGTTCACTTGATAAAAAAATGAAACAGTGAAAGCAGCAAACATAAACTACAAAAATAGTTAACTACCTATGGAGTGACTTCACAGTCCACACATTGGCATTTGATTACTGGCAGAAAAGGTGGAAGATCCTGAGGGGCAGTCTGTTTTTTTGCTGACCTTGTTTTCGGCACCGAATTAAGTCTTCTCCATGCCACATCTCTCAAAATATACTTTCGTGTCCTTCCTCTGAAAGATAAATTTAATCACCAATTCCTTGTATCCCCAAGTGTGGATGACATCCAAAGCATCCAAAAAGTGAAATTAGTCAACTACTACAACACCTTTAGTCTCAAAAAAGTTGGGGTAGGCTAGAGATGAAATTCAAACTGAAGCACCCAAACCAATGTACCACTTAAAAGTGCATGCTTTTGGCACATGGATAGCTACTCTCCACAAACTCCTATCAAAACCAAATCCACACACACTGTGAGTTACCTTGAGTATGTCTATGTCTATTCGTGGAGAGGAATACTATGGTCATTATTTCTTAGCATTTATGTGGGGGCCTATTTCTTGGTGGTCAAACTCATTTAGTCTATTATTAAGGGTCTGCATTGTTGTGTTACTTGATCATGATTATGGTTCCACTTTGATACATGTGGATACCATGATTTTTGCTAATCCCCGGCTTCTACAAGATTTTGCTGCCATTACACTGTATGATTGTAAGGGAACCAACACCATATGGATTATTTGACGGCATGCTTGTCTTTTCAGGTTGTAGATCTTGATCTTCCAAACACAACGGAGAGTTACAAGTTATACTGCATGGTATTTTCATTGACAGATCATTTATTTTTGTTCTCTGTTGTTTAATTTTGTCTGAATGCCTTCAATGGTGATGCTTCATATGTTCACAGAGAGCTATTGCTAGTGATATCAAGGAGTCAGTTTGCAGGGTTCCAGATACTGCCTTCGATGGTATAATATAAACACATTTAATTTATGAATGGGGCATTTGCAAATTTGCCACCGGTTTTTTCAATTTTGCAAGGATGCCACTCGAGTGACAGTTCTAGTGGCATTTTTGCAATTTTCTAGTGGCAGTCTTGCAATAACGATTTAAAGTAGTGGTAAATTTGCAATTGTCCCTGCCGTACACGCACTAGTTGGCTATTTTTTATTATTATCTGAAGTCCTGTAACATAAATTATCTTTGTTGCAGGGACTGTTTTAACCTGTCCTTTTATGTTCTTTTTTTTTATGTTCTGCTGTTTACTTTTCCCTGTTTTATTTTCATGCAGAAGTGGCATATGCAAACGTTCCTACAACTTCATATGAGCTTCCAGATGGACAGTAAGTTGTATATCAAAATTATTTATGCGCATATTTTTTTTCCAGTAGGTTTAGTGGTTTAATTTTGTAATGGCTTATTGACGTGTTCCAATACAGTTAGATTATGAGCTACTTTTCTGCATGTGCATCTGCTGCATCTGTGCATGATACCTCAGTACACCACAATGATTGTTTATAAAATTGATATACCACAATGAAAATCAACAATATATTGACATAAAATTAATACTCCCTCCATCCCAAATTATAAGGCATATATATTTTTTACACGGTCTTCAATGACATACTTTGACCATTAATTTATTCCATGTCATCTTCCCAATGAATATGAAATTAGCATCACATGAAAGTACTTCAAAATATGAATCTGGTGATATAACATGCATAATACTTAGCATTGATATGGTTAGTATTATTATTAGTAAAAAGTTACCGAGTTTGATTTTCCTTAAAAATAAGGGCGTCCTATAATTTGGGACAGACTACAGAGGGAGTATACCACAATTTGAACTAGTTCAGTGAAATGGAAGTCAAATAGAAGGGAGAACTTGAGTGCAGCACTAAGATTTATTGTCCTTTAACCTTCCCATGTACCTTCAGCTTCTATATGTTGTGACTTTGCAGATTGGTAGGTCATCTCATGAACCCAACTTCTTTAAATTGTCATGGTCATTTGCATGTTATTTTGAGAGTGGCGCATGATGCACCAAGAGGGTGTTGAGATGCACCGATATAGCTGAACTTTTCCTTGCTATTTTCTACAACATTATGGTTAAGATTTTGTTTGTGCAATGTACCTTTCAAGCATCTTTAACTTGCTGTCTGATATCTGGACAGAACCATTGAAGTTGGTGCAGACAGATTCAAGATTCCTGATATTCTGTTTAATCCATCTCTTTCTCAGGTGAGGTTTGATGAAGAGAATAATACTTGCTGTACACTTGTATTTCAGGCAGGATTTGTAACTGGTGCTGGTACTAGATTACCTTGTTCCAGAACAAAACCAGCTTGCTGTTTTCTTCTTCAGTAGATGCTGTTGATGGCTTGAAAAATTCTTTTGAACCATGTTGAATTGCTGACTCTCACATGCACACGAATTTTGTGATGCATAGACTATTCCTGGAGTTGATGGATTTGCAGATTCAATGTCAGTTCGTGGCCTTCCACGAATGGTGAGTTAAATGAGAGCTAGACTTGCATTTACTGTTGCGCATCCCTGGCAGTTCTTCATATTACTGAAGTTGCTATTGCTGTTACTTTCTCAGGTCATTGATAGTGTAAATAGGTGCGATGTTGACATTCGCAAGGAACTGCTAAGCAGTATTCTGGTAAATGGCTATAAATTCTTCAACCACATTTTACTAGCTCTCTTGGTGTTGCCATCCATGAGCTTAGTGATATCTTTCCCAAAATTCTCTTGTGAAGTTCTGTTAATACAATTCTAACATCTGCAAACATGCATTGTGGATAGCTTTCAGGTGGTTCATCATCAATTCTGCAGTTGAAGGAGAGGCTAGAAAAAGAAGTACTTGAGGTATATTTTTTCTTCAGAACAAACTAGGACTGCCCTGGCCTCATCCTGTTTATACTTCCCATTTTTAAATGTGCACCATTTTATAGCCTGTGCAGCCAAACTTTTAAATTTTTAACTACTAAAGTACATTGAAAATATTCCGGGGTTGCTACATGGAGAAGTAGTGGTAGGTTTGCCTTTTTCATGAAAAAGTATATTTTATCATTATATGAATAACATATAATTATAAATGCAGAACTTAGAAACAGTTAAAGATTTGTGGTTGGAGTCCTTTGATGTCTCTAATGCCATCTGTTTTCAAACAGAGGAAACAACATATAGGAGTCAAGCCTATGATCTTTTTCTTTGTTCTTGTCCAATATGGAAATACAAGAATAAATGAATCTCATTTTTTTTCTTGGGATAGTTAATAACGGGCCAGAGTGCAAGTTAATAGAACTCTATTCTGTTTTCAGGCTATTGAAAATGTTTCCTTAGACCTTGTGCAAGGCTTGTTCTTATATATACCTCAAAATATTGCAGGAATCTTCTGGTAATACTCGTGTAAAGGTTTTGGCAAGTGGAAATTCAGTAGAGAGGCGATTCAGGTATTCCCTTTTATCTTTGTAGTCTTTATCCTTCCCAAATTCGATTGAACATTTTGCTCTACTGCTCACTGGAGAAGTTTGAATGAGTGCCTTTTGGCTCTGCAAAGTGCAACTCTGTTGCTTGTTTTTATTGCTTGAAAAGCTTAACACATGAACTACCAAAATATACTGATCACTTTGTTCTAGTCATACATACCTTAAGTCATTTTATTCTGCAGTGTTTGGATTGGAGGGAGCATTCTAGCATCCCTTGGGTCGTTCCAGCAAATGTGGTTCTCCAAAGCAGAGTAAGCACAACACAGTATTTTAGGTTATGTTTCCCCTATCTCGTCACGGACAACTCACAAGTTAATGTGATTTATCTCACTATAGATACGAAGAACATGGAGTATCTTACATCCAAAGGAAGTGCCCATGA</dnaseqindica> 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| External Link(s) |
