Difference between revisions of "BGIOSGA027986"

From RiceWiki
Jump to: navigation, search
(Created page with "{{IndicaGene| GeneName = BGIOSGA027986| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027986, complete gene.| tag = OJ1136_...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA027986|
 
GeneName = BGIOSGA027986|

Revision as of 17:10, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA027986

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027986, complete gene.

LocusTag

OJ1136_D12.115-1

Ensembl Transcript ID

BGIOSGA027986-TA

Ensembl Protein ID

BGIOSGA027986-PA

Length

3885

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:2876950..2880834

Sequence Coding Region

2876950..2877195,2878163..2878446,2878559..2878655,2878783..2878818,2879682..2879827
,2880031..2880136,2880302..2880361,2880784..2880834

Genome Context

<gbrowseImage1> name=IndicaChromosome08:2876950..2880834 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:2876950..2880834 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACCCCTCGCAGCCGTCCGGGAGCTCCGCCGACGCCTCGGCGTCCTCCTCCTCCTCCTCCTCCGCCGTGGATAATCTCGCCGCGGGGATGGCGGCCATGAGCCTCCAGGATCGGTTCGAGTTGCTGCGGGGGATCGGCGAGGAGTGCATCCAGGAGGACGAGCTCTTGAACCTGCTGCAGAAGAAGCCCGTCCCCATCTGCTACGACGGCTTCGAGCCCTCGGGCCGCATGCACATTGCGCAGGGCATTGTGAAGACGATCAATGTTAACAAGATGGTCAGAGCTGGATGCAAAGTGAAAATTTGGATAGCAGACTGGTTTGCTCAGCTAAACAACAAGATGGGGGGTGATATAAAAAAAATACAGACTGTGGGACGCTACATGATTGAGATTTGGAGAGCGGCTGGTATGAATCTTGATGGTGTGGAATTCTTGTGGTCCTCAGAGGAAATCAATAAGCGTGCAAATGAATATTGGCCACTTGTAATGGACATTGCTCGTAAAAATAATGTCAAAAGAATAATGAGATGTTGTCAGATTATGGGTCGGAATGATTCGGATGAGTTGACAGCTGCCCAGATCTTCTATCCTTGCATGCAGTGTGCTGATATATTTTTCTTAAAGGCAGACATTTGCCAGTTGGGCATGGACCAAAGGAAGGCTCAGGTAAATTTGAAGATAAAACAAGCATTTTGCCCTCCCACCATTGTTGATGGCAATCCATGCTTGGAGTACATCAAGTACATTGTTTTCCCTTGGTTTGAAACGTTTGAGGTGGTTCGGAAGGAAGAAAATGGCGGTAACAAGACATTTGCCAACATGAATGAACTCATCGCTGATTATGAGAGTGGTGCTTTGCATCCTGCTGATGTTAAACCAGCTCTCGCAAAAGCGATAAACCAAATATTGCAGCCTATTCGTGACCACTTCAAAAACAACAGTGAAGCAAAAGTTCTGCTCAACACTGTTAAGAATTACAAAGTAAAAAAGGAGGAAACTAGTTCAAGCCCTCAAGCATCTTAG</cdnaseq>

Protein Sequence

<aaseq>MDPSQPSGSSADASASSSSSSSAVDNLAAGMAAMSLQDRFELLRGIGEECIQEDELLNLLQKKPVPICYDGFEPSGRMHIAQGIVKTINVNKMVRAGCKVKIWIADWFAQLNNKMGGDIKKIQTVGRYMIEIWRAAGMNLDGVEFLWSSEEINKRANEYWPLVMDIARKNNVKRIMRCCQIMGRNDSDELTAAQIFYPCMQCADIFFLKADICQLGMDQRKAQVNLKIKQAFCPPTIVDGNPCLEYIKYIVFPWFETFEVVRKEENGGNKTFANMNELIADYESGALHPADVKPALAKAINQILQPIRDHFKNNSEAKVLLNTVKNYKVKKEETSSSPQAS</aaseq>

Gene Sequence

<dnaseqindica>1..246#1214..1497#1610..1706#1834..1869#2733..2878#3082..3187#3353..3412#3835..3885#ATGGACCCCTCGCAGCCGTCCGGGAGCTCCGCCGACGCCTCGGCGTCCTCCTCCTCCTCCTCCTCCGCCGTGGATAATCTCGCCGCGGGGATGGCGGCCATGAGCCTCCAGGATCGGTTCGAGTTGCTGCGGGGGATCGGCGAGGAGTGCATCCAGGAGGACGAGCTCTTGAACCTGCTGCAGAAGAAGCCCGTCCCCATCTGCTACGACGGCTTCGAGCCCTCGGGCCGCATGCACATTGCGCAGGTTCGGCGAATCCGCCTCTTCCTCCCCTCCTGCCTCTAGATTCGATCTACTTTTCCCTAGGTTTCTAGGTTTCGAGACAACTGAGGTTGGGTGGGTTAAGTAGATTGTACAAGGACATAGAATTTCCCTGTTGGCTAGAATTCGATTAATCATGGAGGACATTAGAAACATCACACTATTTTTTCTTTTGCTCCCAAAGTTTCTGTCTAGGGTTTTTACTCCTGCTTATTGAAATATAATTGGCAGCTCTCCTGCCGGTTTATTTTTTTAAAAAAAAGTTTCTGAGTGCAATCTCCTGAAATTTGAAGGGGTGTGCTCTTTTCTACCTGGTAGGGTATTAGCATTATTAGCAAATTGTGCTCATATGTGCTTTTCCGAGTTAAATTATGTGTTGCGTCGATGTAAATTTAGTAATCGCATGGACATTCAAGATGGATCACCATGATTTTACCTAGCGGGGTAGTGGGGATTTGCACTAATATGCTCACTTCACTTTAAGCTGTTGATGTAAATAAATTTGGGTTGGGATATAGCTATATGGTTTGTTTTATCCATTGACCATTGTATGAACCACATGGGTGAAATGAAGTGTGGTGTCTATGTTAATCTGGTATGTGTTAAATGGTGGTGTGTGCTGGTTTGGATAGTAACTAGCCATGATGATGATAGTTTTCTCTAGAACTATGAAAAAGATAATCTAGTTCATTATTCCTATGTTTCGAGGTTTATTCTTGTTCTAGAAAATGAAAACAAGCTAGCATAATCATTCCTTGGGTGTTAGCATTACCTGATCTTTGGTTACAATATTCACTAGTATATCTTTTTTTATTGTGTGCTTCCTCTTCTGTCATGACTCGTTGTGGGCAGGGTGCTTTAGTGACGCGTGAAGTTTACACGTGCAAAAGTTTTGGACTGTAGGATTTGAACAGATGAATTGGTCTTGATCGATCTTTCTGTCTATTGTCAGGGCATTGTGAAGACGATCAATGTTAACAAGATGGTCAGAGCTGGATGCAAAGTGAAAATTTGGATAGCAGACTGGTTTGCTCAGCTAAACAACAAGATGGGGGGTGATATAAAAAAAATACAGACTGTGGGACGCTACATGATTGAGATTTGGAGAGCGGCTGGTATGAATCTTGATGGTGTGGAATTCTTGTGGTCCTCAGAGGAAATCAATAAGCGTGCAAATGAATATTGGCCACTTGTAATGGACATTGCTCGTAAAAATAATGTCAAAAGAATAATGAGGTAACCATCTTTTGTTTGCTTATATACATCTATGGCTTCTTCACTCCCAAAGCTTGAAAGTGTTATTGCCATTCCTAACATGCAAGTGAATATATTTTTCTTTGGTTTGCAGATGTTGTCAGATTATGGGTCGGAATGATTCGGATGAGTTGACAGCTGCCCAGATCTTCTATCCTTGCATGCAGTGTGCTGATATATTTTTCTTAAAGGTTAGTACATTTACACTATTGCACACGTGCTTTGTGAAAAGGAAGTATACTGAGTTACAATCTAAAGACAGCTGTGTGCATGAACCTGTGGCATGAGTTTGCTCTAATTATCCCTTTCCCTTTGTAGGCAGACATTTGCCAGTTGGGCATGGACCAAAGGAAGGTCAATATGCTAGCCAGGGAGTACTGTGATGACATCAAAAGGAAAAACAAACCAATTATTCTGTCACATCGTATCCTTATCTGCCCTTCCAAGTTGGTTAAACCTTTATATGCAGTAAATAAACATGGGACACTGTTCAAGCTCAGTCATAATTGGGGGTTCTTAACCAGTTTTTAGAACACTGTATTACTTCCTTAACCTGAATTACAGATATGCTCCCTGGTTTTAAGGAGGGCCAAGAAAAGATGTCAAAGAGTGATCCATCCTCAGCCATTTTTATGGAAGATGATGAGGTTTTCCCCATTACTACCAGTTATCCATCTTTATATACTTCTGAACCCAATATTACAATATAAAATAATTGCTTTTGTCATGCACTATGCCTCTCATAACTATGCTCATGCACCAACAGTTGTTGAAGAGTGGCATGACCTTCTAGTTTGCACTGGTGGATAGAGATAGTGGAATATGTTTTAAGGATATTTGCCTAGGATGTTTAGGATTTGGTCATCATCTACCATAAAAGATAAAGGAATGTTTAAGCTCTATACTTTCATGTTTTACTTGGCGATTTTAATTTTGTTCTAGTTCCTAGTTTTGAGTTGACAGATATATTATTTTGAATGGCTACTGTGGAGCCTTATATGCTGATTTGCAGTTTATTCATTTTGCATAATCCAGTGGATAAATGGAAACATTTATGTTTGTACCATTTGCTTGGAGCATTGTCTTCTATAGTGACTTCTGCTTTGTCCCTATTGTGCCTGGTTACCTATTTTCTGTTAAGTTGGCTTCTCGCAGCATGTATTCATCATTGCTCTACCTGGGTTTCTAAGTTTATTTGCTTCATAACTTCATTGCAGGCTCAGGTAAATTTGAAGATAAAACAAGCATTTTGCCCTCCCACCATTGTTGATGGCAATCCATGCTTGGAGTACATCAAGTACATTGTTTTCCCTTGGTTTGAAACGTTTGAGGTGGTTCGGAAGGAAGAAAATGGCGGTAACAAGTAATATTTTATTCTGAGCTACCAAACTTTGAATTATCCTATTTACTATCAATCATGTTAAAGGATAATCATACGATAATAACTGTACCACCAGTTTATGTGCAAACTGAGCACAACCATTTAGTTTATTGATCTTCTAATTCCATGACAAGGCTAAGTATGTTTTCAGTTGTAACAACTGTTTGCCATTTGCTGTTAAACAGGACATTTGCCAACATGAATGAACTCATCGCTGATTATGAGAGTGGTGCTTTGCATCCTGCTGATGTTAAACCAGCTCTCGCAAAAGCGATAAACCAAATATTGCAGGTATGTATCCTGGCAAAACGAATTGATAGATTCTTTTAATTGTTGTGGGATCAATCTTGCATCAGTGCATTTTTGTATTGACCTGTTTTTTCATTGGATACGAATCAATAGTCCATTGCTCTTAGATTATCTTGTCTTAATAATGTTATCCTTTCCCATTTTCAGCCTATTCGTGACCACTTCAAAAACAACAGTGAAGCAAAAGTTCTGCTCAACACTGTTAAGGTATAATTTTTCTTATCCATCTGTTAACTGCACGGTTACCTTTCTACATTCTATCTTCGAACTGTAACTGCAACTCTGCAAGATAGTAACCACTTCGATGCCTTTTAACTGCACCTGTGCAATATCTCAGATTGATTTATGATCCGGTTCATTGTCAATAGCTTGAATCATGCCTTTTTCTTGATATATCTGCCTTATTGGGATTTTTGTCGGTGGCACTTGAGACCTGACTCAGCCGGCATAACCGTGCAAAACCTCATTTACCAGGACATAATGGAAAAAAATAATTGTTTACTTTAATTTGCAGTTTTATTTTAGGGCTCTTAATAATCTGGCTGAACTTTGAGTTACTCTGTTGACAGCGATTAGTGCCAATACGGGTCAATTACTAGGAAGTTAATTTGAATTTTTCTGATTTGCAGAATTACAAAGTAAAAAAGGAGGAAACTAGTTCAAGCCCTCAAGCATCTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027986