Difference between revisions of "BGIOSGA028916"

From RiceWiki
Jump to: navigation, search
(Created page with "{{IndicaGene| GeneName = BGIOSGA028916| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028916, complete gene.| tag = B1142B0...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA028916|
 
GeneName = BGIOSGA028916|

Revision as of 17:15, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA028916

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028916, complete gene.

LocusTag

B1142B04.27

Ensembl Transcript ID

BGIOSGA028916-TA

Ensembl Protein ID

BGIOSGA028916-PA

Length

3233

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:26121068..26124300

Sequence Coding Region

26121068..26121310,26121748..26122064,26122824..26123049,26123135..26123380,26123468..26123578
,26123884..26124015,26124130..26124300

Genome Context

<gbrowseImage1> name=IndicaChromosome08:26121068..26124300 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:26121068..26124300 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGAGCAGGGTGGCGGCGGCGCTGCTCCGCCGGGGGAGGGACCAGGCGTCCTCGCTCATGGCCGCTCGCCTCCCGAGGGGAGCCCCCGCTCCGTCTCCGGCTGCTCCTAGGGTTGGATCCGGCTCCGTCTGCGGCTGCGGCGGCGGCGGCGGTTTACTAACTGGATCGAGGTCGACGGGATCCGTCTTCTCCGCATCGCGCCTCGCCTCGTTCCACGCCTTCCGTTCAATCGGCTCCAAGACCTTGATGGGCCAATGCACAAGGAAAATGACTACTACTGTGGCAGCAATGAATTCAGGCGTGGCCAATGCAGCGGCATATTCAGGATTGAAGTTGCTTGTTACCAAAGGGCCCCAAGCACAGAAGGCCATCGGGATATGGCTCTTCGGATGTGCCACGTGGGTATTCGGCTTGGTCATACTTGGAGGAGTTACACGGCTTACACGCTCAGGATTGTCGATGACTGACTGGAAATTTACGGGGAGCTTGCCTCCAATGTCAGATGAAGAGTGGCTGCTGGAATTTGAGAAATACAAACTGTCACCTGAGTACAAGAGGGTGAACAAAGGCATGAGCCTTGGAGATTTCAAATTTATATACTGGATGGAGTATGGACACAGAATGTGGGGAAGGGCTCTGGGATTTCTATTTTCTGTTCCTTTTGCCTATTTCATTGCAAAAGGGTATGTTACCCGCCAACTTGGACTCAGGCTGTCAGGTCTTTTCGCACTTGGTGCGGGTCAAGGACTAATTGGCTGGTGGATGGTGAAAAGTGGTCTTGAGGAACCAGCATCTGAGTATGTTCAACCAAGAGTCAGCCCATACAGACTGGCGACCCATTTAACGTCTGCATTTGTTATATATTGTGGCATATTGTGGACAGCTCTGTCAGTGGTTATGCCAGAACCTCCGGCTGGATCAATGAATTGGGTAAATTCTGCAGCAAAGATTAAAAAGTTAGCAATTCCTGTCAGTGCCGTGGTAGGCATTACTGCCATATCTGGAGCATTTGTTGCGGGCAATGATGCAGGGCATGCATACAATACATTTCCCAAGATGGGTGACACCTGGATACCAGAAGATGTGTTCGCTATGGAGCCTTTCATACGTAACTTCTTTGAGAACACGTCCACTGTGCAGCTTAATCACCGAATTCTTGCAACAACTACCCTATTGTCTGTGGGTGGCTTATGGTTGGCTGCAAGGAAAGTGGACATGCATCCAGCAATCAAGTCTCTTATCGGAAGCACGCTTGGAATGGCTGCCCTTCAGGTTACATTGGGAATATCTACACTTTTGATGTATGTTCCTACTTCCTTGGGCTCAGCTCATCAAGCTGGGGCATTGACACTACTGTCACTGATGATCCTTCTCACCCACACTTTAAGAAGACCGTCACCAGCCCTTCTGAAGTCACTTGCATCAGCAGTGAAATCAACCTGA</cdnaseq>

Protein Sequence

<aaseq>MGSRVAAALLRRGRDQASSLMAARLPRGAPAPSPAAPRVGSGSVCGCGGGGGLLTGSRSTGSVFSASRLASFHAFRSIGSKTLMGQCTRKMTTTVAAMNSGVANAAAYSGLKLLVTKGPQAQKAIGIWLFGCATWVFGLVILGGVTRLTRSGLSMTDWKFTGSLPPMSDEEWLLEFEKYKLSPEYKRVNKGMSLGDFKFIYWMEYGHRMWGRALGFLFSVPFAYFIAKGYVTRQLGLRLSGLFALGAGQGLIGWWMVKSGLEEPASEYVQPRVSPYRLATHLTSAFVIYCGILWTALSVVMPEPPAGSMNWVNSAAKIKKLAIPVSAVVGITAISGAFVAGNDAGHAYNTFPKMGDTWIPEDVFAMEPFIRNFFENTSTVQLNHRILATTTLLSVGGLWLAARKVDMHPAIKSLIGSTLGMAALQVTLGISTLLMYVPTSLGSAHQAGALTLLSLMILLTHTLRRPSPALLKSLASAVKST</aaseq>

Gene Sequence

<dnaseqindica>1..243#681..997#1757..1982#2068..2313#2401..2511#2817..2948#3063..3233#ATGGGGAGCAGGGTGGCGGCGGCGCTGCTCCGCCGGGGGAGGGACCAGGCGTCCTCGCTCATGGCCGCTCGCCTCCCGAGGGGAGCCCCCGCTCCGTCTCCGGCTGCTCCTAGGGTTGGATCCGGCTCCGTCTGCGGCTGCGGCGGCGGCGGCGGTTTACTAACTGGATCGAGGTCGACGGGATCCGTCTTCTCCGCATCGCGCCTCGCCTCGTTCCACGCCTTCCGTTCAATCGGCTCCAAGGTGCGTTCGTTGTTGTGCTTTTCCCCCCATTCTGCATCCCTTGGTTGGTCGTGAACTCGTGATGATACCCTCACTCTGGAGGGTAGTGGATTGTGGATTTGTGGTCAACCATCTGTGAGTGTGACACAATGACGCGATCGTTTTTTGAGCGGAATGGAGCGGAGAACATGCTGTTAGGAGGAGTACTATGAATTTGTAGCGACATTAGTTTCGATTTGGATGTGTGGAATTTTGGTGTCAGGGTCTGAGCATTTTTGGATCGGGGAGTCAACATACATGATGAACTGGGTGTATTAAATCTTGGCCGTGCTATATAATCAATTTGGAATATGATATGCACCACATTCATGGGTCCTATATAATCAATTTCCTTAACTTGTAACCACTAAAAAGTGCTAGTACTCGTGCTGATAGAGGTTTTATGTGCTCTATTTCAGACCTTGATGGGCCAATGCACAAGGAAAATGACTACTACTGTGGCAGCAATGAATTCAGGCGTGGCCAATGCAGCGGCATATTCAGGATTGAAGTTGCTTGTTACCAAAGGGCCCCAAGCACAGAAGGCCATCGGGATATGGCTCTTCGGATGTGCCACGTGGGTATTCGGCTTGGTCATACTTGGAGGAGTTACACGGCTTACACGCTCAGGATTGTCGATGACTGACTGGAAATTTACGGGGAGCTTGCCTCCAATGTCAGATGAAGAGTGGCTGCTGGAATTTGAGAAATACAAACTGTCACCTGAGTACAAGAGGTAAGAATTTGTTGGCCTACTGCAGTGTGCTACTGCCAAAAAACCCACTGGTGAAACTAGGAGTTGTACAGTTCCACCTAATAATTGTGTAGCATGTCGAATTTTGTGTATCCCCTGTTATGATCCATTTAGTGTAAACATCAATCTCATAATTTTATTGCTGCTGAACTTGTACTGCAGTTAGCTTCAGTTCTTGATATTATCATGCTGATTGATGAATTTTAGAATGAATATTTAGGATGCTATAGAAGAACTATCCATAAATGTTTCAATTGATTAGAAATAGGTCAAATGTTTGCCTTTTCTATATATGCTTATGAGCTTATCTAGGACTTTCTTTTTCTAAACTTCAACTGGTTATCTCATCATGGGCCAATAGAACATGCCAGGCTGCCTGGAGAACATCTTGAACTCTATGGTCTTAACATTAACACTTTTAACAGCTTGTAAGCAAGTGTTAAATAGGTTTCACTGGGCTGGTACTGAGTCTGGGACCCTCGATCCAATTACTTTTAGAGGAACTCATGAATTTTCTGTTATGTGTAAACAATTTGAAAATGGTACGGTTCTAATAGTTATATATGAGAAAAATAACTGAAATATTCAGCATTTGGTGACTTTTGCGCTAATTAGTGTGACTTGTTAAGATGTCTCAGTCACGTCAAATTTTGTTTTCAAACATGTACATATTACAATGAGATACTGTTTTGGATATTATTTTTCCCCTAATGCAATAGCAGCATTCATGAACATTTCTAGGGTGAACAAAGGCATGAGCCTTGGAGATTTCAAATTTATATACTGGATGGAGTATGGACACAGAATGTGGGGAAGGGCTCTGGGATTTCTATTTTCTGTTCCTTTTGCCTATTTCATTGCAAAAGGGTATGTTACCCGCCAACTTGGACTCAGGCTGTCAGGTCTTTTCGCACTTGGTGCGGGTCAAGGACTAATTGGCTGGTGGATGGTGAAAAGTGGTCTTGAGGTGCTTATATTGTCTAATGCAACATCCTTCTTATTGAGCTACTAGTGTTTGTTGCATGTGGATTCATCATTCTTTTTCATTGTAGGAACCAGCATCTGAGTATGTTCAACCAAGAGTCAGCCCATACAGACTGGCGACCCATTTAACGTCTGCATTTGTTATATATTGTGGCATATTGTGGACAGCTCTGTCAGTGGTTATGCCAGAACCTCCGGCTGGATCAATGAATTGGGTAAATTCTGCAGCAAAGATTAAAAAGTTAGCAATTCCTGTCAGTGCCGTGGTAGGCATTACTGCCATATCTGGAGCATTTGTTGCGGGCAATGATGCAGTATGTCAATGTTCTCACTCTTATCTTAAAAAAACATGTGTGCATCTAAGTATTTGTCCTAACTGTCTAATTATTTACTACCAACAGGGGCATGCATACAATACATTTCCCAAGATGGGTGACACCTGGATACCAGAAGATGTGTTCGCTATGGAGCCTTTCATACGTAACTTCTTTGAGAACACGTCCACTGTGCAGGTAATGCTTTATCTCACAATAAAGAGTCGACAACTCTGAAATTTTGTGATGTTTAGGAGATTATGCTTGTAGTGCCTTTTTGGATTAATTTTCTTCTTTTTTTACCTGTAATATAAGCTACTCACTCCACTATTCTAGGAAAAGGAACAACTGGCTATACCAATAAAGAAAACATGTTCTTTTTCATAGCATGCAATCATCAACATTGCAGGACAGTCCTATGAATGCCGAGCACAGACCATTCTTCTATATAATTCTGGTGTAGCACAATGTCCTGTGCTAATATGGAGTTTTCACTGTTGTAGCTTAATCACCGAATTCTTGCAACAACTACCCTATTGTCTGTGGGTGGCTTATGGTTGGCTGCAAGGAAAGTGGACATGCATCCAGCAATCAAGTCTCTTATCGGAAGCACGCTTGGAATGGCTGCCCTTCAGGTAAAAAATTATAAAAACCTACCCGGATTTGTTGTTCAGATATCAATCATCACCGTAGTTTTTTGCTTAATTAAAATGGCCTAAAATGTTATCATTCTACTTTCTTTCAACCAGGTTACATTGGGAATATCTACACTTTTGATGTATGTTCCTACTTCCTTGGGCTCAGCTCATCAAGCTGGGGCATTGACACTACTGTCACTGATGATCCTTCTCACCCACACTTTAAGAAGACCGTCACCAGCCCTTCTGAAGTCACTTGCATCAGCAGTGAAATCAACCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028916