Difference between revisions of "BGIOSGA029716"

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(Created page with "{{IndicaGene| GeneName = BGIOSGA029716| Description = Glutamate receptor| Definition = Oryza sativa Indica Group BGIOSGA029716, complete gene.| tag = OsI_31459| tid = BGI...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA029716|
 
GeneName = BGIOSGA029716|

Revision as of 17:19, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA029716

Description

Glutamate receptor

Definition

Oryza sativa Indica Group BGIOSGA029716, complete gene.

LocusTag

OsI_31459

Ensembl Transcript ID

BGIOSGA029716-TA

Ensembl Protein ID

BGIOSGA029716-PA

Length

5310

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:14164723..14170032

Sequence Coding Region

14169774..14170032,14167739..14169069,14167147..14167450,14166276..14166682,14164723..14165262

Genome Context

<gbrowseImage1> name=IndicaChromosome09:14164723..14170032 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:14164723..14170032 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGAGAGCACCTGAGAGGGCTGCAATCTTCTTCTTGCTCCTCAGTCTGACTGTCGCTCAATATACAACTGAAAGTGGAACAGGTACACTGAATGTTGGAGTGATTCTCCATCTGAAGTCGTTGGTGGGCAAAATGGCACATACCAGCATTATGATGGCTGTGGAGGATTTCTATGCAGTCCACAGGAGCTTCAAGACAAAGTTAGTTCTCCACATTAGGGATTCCAATGGAGACGATATCCAGGCTGCATCAGAAGCAATTGATCTGCTGGAAAATTACAACGTGAAGGCTATCGTTGGCCCACAAAAATCTTCAGAGGCTACTTTTGTGTCTGATCTTGGGAACAAGAGCCAAGTCCCAGTTATCTCCTTCACTGCAACAAACCCCACTCTATCATCTATCGATGTGCCATATTTTTTGCGTGGAACATTAAGTGATGTTGCTCAAGTGAATACAATTGCTGCTCTTATCAAGGCATATGGCTGGAGGGAAGTGGTACCCATCTACGAGGATACAGACTATGGTAGGGGCATCATACCATATCTTGCTGATGCCCTCCAAGAATTCGGAGCTTATATGCCTTATCGCAGTGCGATATCTAAATCAGCAAACACTGACCAAGTTGAGCAAGAACTCTACAAGCTAATGACAATGCAGACTAGGATTTACGTTGTTCATATGTCAGTGAACATTGCCTCCATTCTCTTCACAAAGGCCAAGGAATTAGGAATGATGAGCAAAGGTTATGCATGGATTTTGACAGATGGTATTTCGAATATTGTTAATTCCCTAAGCCCTTCAATTCTTGAGGAAATTAATGGTGCAATTGGTGTCAGGTTCTATCTGCCCGCATCAAAGGAACTTCACGACTTCACTGCAAGATGGAATAAGAGGTTCAAACAAGACTACCCAAATGATCCACCATCACAACTAAGCATTTTCGGGCTTTGGGGTTATGATACTACTTGGGCCTTAGCACAAGCAGCAGAAAAGGTAAACATGGCTGATGCCATATTTCAGAAACAGAAAGATACAAAGAACACAACAAGTTTGGGAACTCTGGGAATTTCTACAATTGGTCCGAAACTCCTAGATTCGATCTTACATAGTAAGTTCAGAGGTCTAAGTGGTGAATTTGACCTTAGAAACAGGCAGCGGGAGTTTTCCACATTCCAGATAATTAATGTGGTTGGAAGCAGGTCAAAAGAAATAGGCTTTTGGACAGCAAAACAGGGAATCTTCCGACAACTGAACGAAAATAAAACAACAAACATAAACTCTGTGCCTGATCTTGATCCAGTGATGTGGCCAGGAGAAGTATATACAGTGCCTAAAGGATGGCAAATTCCCACTAATGGAAAGAAGCTCCGTGTAGGTGTACGGACAAGTGGATATCCTGAGCTTATGAAGGTGGAAAAGAATCCTGTCACCAATGAAGTAACTGCCTCTGGGTATGCAATCGATGTATTTGAAGAGGTATTAAGGAGGCTTCCTTATGCAATACCTTATGAATATGTAGCATTTGATAATGGACAAGGAGTAAATTCTGGGAGCTATAATGATTTTGTGTACCAAGTTCATCTTGGGGTATATGATACGGCAATTGGGGATATAACCATCAGGTATAATAGAACTTCATATGTTGACTTCACACTACCTTATACAGAATCTGGAGTGGCAATGATAGTGCCAGTCAAGGACGACAGGGATAAAAATACATGGGTTTTCTTGAAGCCATTAACTACTGACTTGTGGTTTGGAAGCATTGCTTTCTTCATCTACACAGCAATTGTAATATGGCTGTTGGAGCGACGAATCAATAATGCTGAACTGACTGGTTCATTTTTTCGCCAGCTTGGGATCGCAATATATTTCTCATTCTTTGCAGATAGGGAAAGGGTGGACAGTATTCTGTCTAGATTGGTTGTCATTGTATGGGTCTTTGTGCTTCTCGTGATTACATCAAGCTATACGGCCAATCTATCATCAATGCTAACTGTGCAACAGCTTCAACCCACAGTAACTGATGTTCATGAACTCCTTAAAAATGGAGAATATGTAGGGTATCATAATGGTTCTTATGTGGGTGATCTATTAAAAGGACTTGGTTTTGACAGAACAAAAATTAGGGCATATGACAATTCAGATGACTTTGCCGAAGCACTCACTAAAGGGAGCCAAAATGGTGGTATTGCTGCTGTCGTACATGAAGTTCCATACATCAAAATATTTCTTGCAAAGCACTGCAAAGGGTACACGATGGTTGGGCCAATTTACAAGTCTGAAGGTTTTGGCTTTGCATTTCCTAAACGATCCCCACTAGTTTATGACTTCTCAAGGGAAATACTCAGCATACTAGAGGGAGATTCTATAATTCATATAGAGAAGAAATGGATTGGGGACCAACATGCCTGTCAGAACGATGGCACCGTCGTCGGCTCGAGCAGTCTTAACTTCAACAGCTTCTCAGGACTTTTTCTAGTCACAGGAGTTGCTTCAACCTCAGCCCTTTTGATCGCCCTGCTGATGTTTCTATACAAGAATAAGCACAGGATAAGAAACAGCATAAGCCGTGACCAGACTCGGAGCAGATATGGACCAGAGCACATAAACGAACAAAATGAAGAAAGGGTAATAGATTCCAGCCAGGTCCAGAACCTGCAATTGACAGTACCAGATGACTCTGAATACACATGCCAACAGGAGGAAGAAATATCCATAGAACTGAGCCCAGCTTCAGGGTTCCAACCAAGTCCAGATTTCGCATCCCAGGAACATCGAGCAGTAGCTAGTAGCACAATCATAGCTAGTTCATCTTCTCAAACCCCTAGAATATGA</cdnaseq>

Protein Sequence

<aaseq>MERAPERAAIFFLLLSLTVAQYTTESGTGTLNVGVILHLKSLVGKMAHTSIMMAVEDFYAVHRSFKTKLVLHIRDSNGDDIQAASEAIDLLENYNVKAIVGPQKSSEATFVSDLGNKSQVPVISFTATNPTLSSIDVPYFLRGTLSDVAQVNTIAALIKAYGWREVVPIYEDTDYGRGIIPYLADALQEFGAYMPYRSAISKSANTDQVEQELYKLMTMQTRIYVVHMSVNIASILFTKAKELGMMSKGYAWILTDGISNIVNSLSPSILEEINGAIGVRFYLPASKELHDFTARWNKRFKQDYPNDPPSQLSIFGLWGYDTTWALAQAAEKVNMADAIFQKQKDTKNTTSLGTLGISTIGPKLLDSILHSKFRGLSGEFDLRNRQREFSTFQIINVVGSRSKEIGFWTAKQGIFRQLNENKTTNINSVPDLDPVMWPGEVYTVPKGWQIPTNGKKLRVGVRTSGYPELMKVEKNPVTNEVTASGYAIDVFEEVLRRLPYAIPYEYVAFDNGQGVNSGSYNDFVYQVHLGVYDTAIGDITIRYNRTSYVDFTLPYTESGVAMIVPVKDDRDKNTWVFLKPLTTDLWFGSIAFFIYTAIVIWLLERRINNAELTGSFFRQLGIAIYFSFFADRERVDSILSRLVVIVWVFVLLVITSSYTANLSSMLTVQQLQPTVTDVHELLKNGEYVGYHNGSYVGDLLKGLGFDRTKIRAYDNSDDFAEALTKGSQNGGIAAVVHEVPYIKIFLAKHCKGYTMVGPIYKSEGFGFAFPKRSPLVYDFSREILSILEGDSIIHIEKKWIGDQHACQNDGTVVGSSSLNFNSFSGLFLVTGVASTSALLIALLMFLYKNKHRIRNSISRDQTRSRYGPEHINEQNEERVIDSSQVQNLQLTVPDDSEYTCQQEEEISIELSPASGFQPSPDFASQEHRAVASSTIIASSSSQTPRI</aaseq>

Gene Sequence

<dnaseqindica>1..259#964..2294#2583..2886#3351..3757#4771..5310#ATGGAGAGAGCACCTGAGAGGGCTGCAATCTTCTTCTTGCTCCTCAGTCTGACTGTCGCTCAATATACAACTGAAAGTGGAACAGGTACACTGAATGTTGGAGTGATTCTCCATCTGAAGTCGTTGGTGGGCAAAATGGCACATACCAGCATTATGATGGCTGTGGAGGATTTCTATGCAGTCCACAGGAGCTTCAAGACAAAGTTAGTTCTCCACATTAGGGATTCCAATGGAGACGATATCCAGGCTGCATCAGAAGGTACGTTTTAGAGTTTATCAACTGATATTGTCAAATTTCGGATCACGGCATCATAATGAGGCAAGATCATATAAAGAAGGGAACTTCAGAAATTTTAAAACTTTAATTTCTTTAGATTAAAAAGTTATGGAGGAAAAAAAGATTAAAAAAAACACTGAAACTCCATTTCTTTTCATTTATATAGCTTTTATTTTCACATTTCTCTTTTCTACTGCTGCTGCAAATCTTCAAAATATTATGTGCGTTTACAACGTTAAGCTAAATCCAACAAATTTTAAGCTAAATTAAATTTCCTATGACAACTCCATGGATCTGTATTGAGTTAAAAGTGAGGACCTCCCAACTTGAGTTACTGAATTTACGTTTATACCACTGACTTTGCAAATAAATCCCTCTGTTCTGTTCTCTCTTATTAGCAACTTCTTCAATTTTGGAGCAGGAAAAAAAAAAGAGGAAAGCTCCATACCAAATATAACTAAGATAAGTTAGAGCAAGCTCCCTGTTTTGCTCCCCTGTGCTCAGTGTCTGAATAAACCACTATCATAGTTCCGTATTAAGTGATTAGACAGTCAACCCATCATATTCTAAGTTATAGAACAGCTAGTTCTAGCTGCATAACACTCCTATACCTGCAATAATATTCTTAGAGAAAACCACAGTACAAATGTCCATTAAATTAATTGCTTTCCTATTCCATTGCAAAGCAATTGATCTGCTGGAAAATTACAACGTGAAGGCTATCGTTGGCCCACAAAAATCTTCAGAGGCTACTTTTGTGTCTGATCTTGGGAACAAGAGCCAAGTCCCAGTTATCTCCTTCACTGCAACAAACCCCACTCTATCATCTATCGATGTGCCATATTTTTTGCGTGGAACATTAAGTGATGTTGCTCAAGTGAATACAATTGCTGCTCTTATCAAGGCATATGGCTGGAGGGAAGTGGTACCCATCTACGAGGATACAGACTATGGTAGGGGCATCATACCATATCTTGCTGATGCCCTCCAAGAATTCGGAGCTTATATGCCTTATCGCAGTGCGATATCTAAATCAGCAAACACTGACCAAGTTGAGCAAGAACTCTACAAGCTAATGACAATGCAGACTAGGATTTACGTTGTTCATATGTCAGTGAACATTGCCTCCATTCTCTTCACAAAGGCCAAGGAATTAGGAATGATGAGCAAAGGTTATGCATGGATTTTGACAGATGGTATTTCGAATATTGTTAATTCCCTAAGCCCTTCAATTCTTGAGGAAATTAATGGTGCAATTGGTGTCAGGTTCTATCTGCCCGCATCAAAGGAACTTCACGACTTCACTGCAAGATGGAATAAGAGGTTCAAACAAGACTACCCAAATGATCCACCATCACAACTAAGCATTTTCGGGCTTTGGGGTTATGATACTACTTGGGCCTTAGCACAAGCAGCAGAAAAGGTAAACATGGCTGATGCCATATTTCAGAAACAGAAAGATACAAAGAACACAACAAGTTTGGGAACTCTGGGAATTTCTACAATTGGTCCGAAACTCCTAGATTCGATCTTACATAGTAAGTTCAGAGGTCTAAGTGGTGAATTTGACCTTAGAAACAGGCAGCGGGAGTTTTCCACATTCCAGATAATTAATGTGGTTGGAAGCAGGTCAAAAGAAATAGGCTTTTGGACAGCAAAACAGGGAATCTTCCGACAACTGAACGAAAATAAAACAACAAACATAAACTCTGTGCCTGATCTTGATCCAGTGATGTGGCCAGGAGAAGTATATACAGTGCCTAAAGGATGGCAAATTCCCACTAATGGAAAGAAGCTCCGTGTAGGTGTACGGACAAGTGGATATCCTGAGCTTATGAAGGTGGAAAAGAATCCTGTCACCAATGAAGTAACTGCCTCTGGGTATGCAATCGATGTATTTGAAGAGGTATTAAGGAGGCTTCCTTATGCAATACCTTATGAATATGTAGCATTTGATAATGGACAAGGAGTAAATTCTGGGAGCTATAATGATTTTGTGTACCAAGTTCATCTTGGGGTAAGACATTCTGATTCTCACTTTGTCAAAAAAATCCTATACAAATTGGTATGCCTACTTGAAAATTTTATTAAAGCTAATTTAATTATTCCAAGAAATTTATTTTTCACCAAATTATATTAGTCTACTCCTATTGGAACAATTCGGTGATCTTTCACGTAGTTCAGTTTGGATATATTTTATCTTCTTTTACATTTTCCACCATATTTGTATCATTTTTCCTGTTGTTTTCCACTAGTCACCAGAAAGTCATGAGTAACTGAAACAAGAGAATAAAAAACCTTACAGGTATATGATACGGCAATTGGGGATATAACCATCAGGTATAATAGAACTTCATATGTTGACTTCACACTACCTTATACAGAATCTGGAGTGGCAATGATAGTGCCAGTCAAGGACGACAGGGATAAAAATACATGGGTTTTCTTGAAGCCATTAACTACTGACTTGTGGTTTGGAAGCATTGCTTTCTTCATCTACACAGCAATTGTAATATGGCTGTTGGAGCGACGAATCAATAATGCTGAACTGACTGGTTCATTTTTTCGCCAGCTTGGGATCGCAATATATTTCTCATTCTTTGCAGATAGTAAGTGATGATATTAGGTTTTCTTAATCTTATGACCAGTTTAACCATTTAGATTTGTTTTCTCGAAATTATATCATTGGATTTATCATTAAAAATATTTTCATGATATTATAATTTTATTATTATACCTTAATTTAAAATGTTAAAATATGATGCTCAAAAGTTGCATCTTCAACAATTCAAAATCCTCAAGTAAAATAGAATGGATGTAGTATTTACATACGAGATACTGTCTACGTCACATTCAATGTCTTAGGAATTTCTTGGTGACTGATTGTACTTTGGTTAAAGGCAAGACAAATCCAAACTATACACTAAAAAAAATAGAGAGAGAAAGCTGACAAATAAGCAATTTATTCAGCAATTCCAGTTAATAACAAACAAAGGATACTGCAGTGGTAACAGTAAATTCAGCATCAATGTTTATTTCATGTTCTAAAATATAATGGTTCTCCATTTTGCAGGGGAAAGGGTGGACAGTATTCTGTCTAGATTGGTTGTCATTGTATGGGTCTTTGTGCTTCTCGTGATTACATCAAGCTATACGGCCAATCTATCATCAATGCTAACTGTGCAACAGCTTCAACCCACAGTAACTGATGTTCATGAACTCCTTAAAAATGGAGAATATGTAGGGTATCATAATGGTTCTTATGTGGGTGATCTATTAAAAGGACTTGGTTTTGACAGAACAAAAATTAGGGCATATGACAATTCAGATGACTTTGCCGAAGCACTCACTAAAGGGAGCCAAAATGGTGGTATTGCTGCTGTCGTACATGAAGTTCCATACATCAAAATATTTCTTGCAAAGCACTGCAAAGGGTACACGATGGTTGGGCCAATTTACAAGTCTGAAGGTTTTGGCTTTGTAAGTTAAATTGCTAGTAGTAAATACATGCTTGTGAGTGTGAGCTGCTTATATTTATCAGCACATATGGAACATTTGGAAATGGAGGCATACATAACAAATACAAGATGATAACAAACCTGTGGACTCTAAACATAGCTATGTCTGTTATGAAACCCATCATCCTCCATAACCATTTACTGCAACAAGCAGTTTATCTACTAAAAATCATACTGTAACTTAACAGTAATTTATTCTGTGAGACGTCTAGTGAGTAAGTAGCATTCAATATTGAACAATGTTGCAAGTAGTGTGTACCTATGACATGTAGTAACTGGTGGTTAGCTCACATTTCTTCATGTTGCAAACTGAATTTGGCTTCGAGGTTATAACTTCTAGAAATTGAAGAGCTTATGTGTTCAAAGTCTTAGTTTTGGTTCTAGAAAAGAACAGAATGACTTAAAAAGTATAGGCAGTGGATTGATGTACCACCGATACAAATTTCATATGGTGATTTGATCAATACAAGGACAACAAAAAATACTATCTCCATTCCTAAAGAGATACTACTTATTTTCTTAAAAAGAAAGGAAGATAGAAAGCTATCATCAATGGTTTTTTCTGTTGCTTGTAATGCCAGTCGAATTTAAAACAGTTACTTTACATGGTAGATAACCCACCATTTCAGAAAGTGATAATCTATAAAGCTGATCTGGATTTTCCAGTTTTTAATCAAATCTATTTTTCTGAACTGATATTGCCCCTACCTATATGCTTACTTAGCCCATTGAGAAAAACTCAAAACCACAGTCCACAGGTATGTCATTACAAAAACTAACCGCAAGTGTGTACCAAAGCGATATATTTTACCTTAAACATATGTTTCTCATATATTACGGAGAATTTTAGAATGTTCACCTTTTAAAAAAAACTAACCATAGTTAGACTATGCCTTACCTTTTTTTTTCTGCTGAGGAATCGCTTCATTACTTATCAGTTTGCACATAGCTGAATTAGTTCTACTTCTTGTGTAGGCATTTCCTAAACGATCCCCACTAGTTTATGACTTCTCAAGGGAAATACTCAGCATACTAGAGGGAGATTCTATAATTCATATAGAGAAGAAATGGATTGGGGACCAACATGCCTGTCAGAACGATGGCACCGTCGTCGGCTCGAGCAGTCTTAACTTCAACAGCTTCTCAGGACTTTTTCTAGTCACAGGAGTTGCTTCAACCTCAGCCCTTTTGATCGCCCTGCTGATGTTTCTATACAAGAATAAGCACAGGATAAGAAACAGCATAAGCCGTGACCAGACTCGGAGCAGATATGGACCAGAGCACATAAACGAACAAAATGAAGAAAGGGTAATAGATTCCAGCCAGGTCCAGAACCTGCAATTGACAGTACCAGATGACTCTGAATACACATGCCAACAGGAGGAAGAAATATCCATAGAACTGAGCCCAGCTTCAGGGTTCCAACCAAGTCCAGATTTCGCATCCCAGGAACATCGAGCAGTAGCTAGTAGCACAATCATAGCTAGTTCATCTTCTCAAACCCCTAGAATATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029716