Difference between revisions of "BGIOSGA031000"

From RiceWiki
Jump to: navigation, search
(Created page with "{{IndicaGene| GeneName = BGIOSGA031000| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031000, complete gene.| tag = OS09G04...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA031000|
 
GeneName = BGIOSGA031000|

Revision as of 17:26, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA031000

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031000, complete gene.

LocusTag

OS09G0484900

Ensembl Transcript ID

BGIOSGA031000-TA

Ensembl Protein ID

BGIOSGA031000-PA

Length

2574

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:17363835..17366408

Sequence Coding Region

17363835..17364275,17364371..17364875,17365139..17365182,17365507..17365602,17365698..17366208
,17366374..17366408

Genome Context

<gbrowseImage1> name=IndicaChromosome09:17363835..17366408 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:17363835..17366408 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATCCGAGGCGCAGCCACTGGGAGAGCTCGTCGGAGGACGTGACGAGGCCGCTGCTCCCGCTGCACGACGACGACGGCGCGGCGGGCCGGCGCTCCTGCGCCGCGCTGAGGTCGCTGCTCGCCAACAAGTACCTGGCGGTCGCGTCGGGCCCCGTGGCGTGCGCGCTGATATGCGGCCTCGTCGACCTCGGCGGCCACCGCGCCGCGCGCAACATGCTCGGGGTGCTCGCCTGGGTGTTCCTGTGGTGGATTACCGACGCCGTGCCGCTCGCCGTCGCGTCCATGGCGCCGCTGTTCCTCTTCCCCGTGTTCGGCATCTCCTCCTCCGACGCCGTCGCCAAGGCCTACATGGACGACGTCATCTCCCTCGTCCTCGGCAGCTTCATCCTCGCGCTCGCCATCGAGCACTACAACATCCACCGCCGCCTCGCTCTCAACATCACGTCGCTGTTCTGCGGCGACCCGGTGAAGCCGCCGCTGCTGCTGCTGGGAATCTGCGGCACCACCATGTTCATCAGCATGTGGATCCACAACACGCCGTGCACCGTCATGATGATGCCGGTGGCGACGGGGATCCTGCAGCGGTTCCCGCGCGTCGACGGGGCGTCGTCCTCGGCGAGCAGCGCCGCGGACGCGCGGGAGGTGCAGCGGTTCTCCAAGGCGGTGGTGCTCGGCGTCGTGTACGCGTCGGCGATCGGCGGGATGGCGACGCTGACGGGCACCGGCGTGAACATCATCCTGGTGGGGATGTGGTCCACCTACTTCCCGGAGCAGCCGCCCATCACCTTCAGCTCGTGGATGTCGTTCGGGCTCCCATTGGCGCTCGTCCTCTTCGTCGCGCTCTGGGCCACGCTCTGCGTCCTGTACTGCTCCAAGAACACCGGGAGGGCGCTCTCAGCTTACCTGGACAGGAGCCATCTCAGGAGGGAGCTCAGCTTGCTTGGTCCTATGGCTTTTGCAGAGAAGATGGTTCTAGCCGTTTTTGGGGGTTTGATTGTCCTATGGATGACGAGGAGCCTGACAGATGATATTCCTGGGTGGGGATCACTCTTCCACGGCGAAGTTGGGGATGGAACTGTCACTATCATGATGGCGACGCTGCTGTTCATAATCCCGAGCGGCAAGAACGACGGCGAGAAGCTCATGGACTGGGGCAAGTGCCGGAGGCTGCAGTGGAACATCATCCTCCTCCTCGGCGCCGGCTTCGCCATCGCCGACGGCTTCAGGGCGAGCGGCCTGACCGACATCCTCTCCGAGGGGCTCGGCTTCCTCCGCGGCGCGCCGGCGCTGGCCATCGCGCCCGTGGCGTGCGTCTTCAGCGGCGCCATCACCGAGTTCACCTCCGACGACGCGACCGCCACGCTGGTGCTCCCGCTGCTCGCCGAGCTGGGCAAGTCCATCGGCGTGCACCCGCTCCTCCTCATGGTCCCCGGCGCCGTCGGCGCGCAGCTGTCCTACCTGCTGCCCACCGGCTCGCCGGGCAACGTCGTCGGCTTCAGCACGGGCTACATCAGCATCAAGGACATGGTGATCGCCGGAACGCCCCTGAAAATTGTCGGGGTTGCAGCTCTCACCATCCTACTGCCAACGTTAGGATCCGTCGTTTTTGGCATGGATCAGAAGCTATAG</cdnaseq>

Protein Sequence

<aaseq>MDPRRSHWESSSEDVTRPLLPLHDDDGAAGRRSCAALRSLLANKYLAVASGPVACALICGLVDLGGHRAARNMLGVLAWVFLWWITDAVPLAVASMAPLFLFPVFGISSSDAVAKAYMDDVISLVLGSFILALAIEHYNIHRRLALNITSLFCGDPVKPPLLLLGICGTTMFISMWIHNTPCTVMMMPVATGILQRFPRVDGASSSASSAADAREVQRFSKAVVLGVVYASAIGGMATLTGTGVNIILVGMWSTYFPEQPPITFSSWMSFGLPLALVLFVALWATLCVLYCSKNTGRALSAYLDRSHLRRELSLLGPMAFAEKMVLAVFGGLIVLWMTRSLTDDIPGWGSLFHGEVGDGTVTIMMATLLFIIPSGKNDGEKLMDWGKCRRLQWNIILLLGAGFAIADGFRASGLTDILSEGLGFLRGAPALAIAPVACVFSGAITEFTSDDATATLVLPLLAELGKSIGVHPLLLMVPGAVGAQLSYLLPTGSPGNVVGFSTGYISIKDMVIAGTPLKIVGVAALTILLPTLGSVVFGMDQKL</aaseq>

Gene Sequence

<dnaseqindica>1..441#537..1041#1305..1348#1673..1768#1864..2374#2540..2574#ATGGATCCGAGGCGCAGCCACTGGGAGAGCTCGTCGGAGGACGTGACGAGGCCGCTGCTCCCGCTGCACGACGACGACGGCGCGGCGGGCCGGCGCTCCTGCGCCGCGCTGAGGTCGCTGCTCGCCAACAAGTACCTGGCGGTCGCGTCGGGCCCCGTGGCGTGCGCGCTGATATGCGGCCTCGTCGACCTCGGCGGCCACCGCGCCGCGCGCAACATGCTCGGGGTGCTCGCCTGGGTGTTCCTGTGGTGGATTACCGACGCCGTGCCGCTCGCCGTCGCGTCCATGGCGCCGCTGTTCCTCTTCCCCGTGTTCGGCATCTCCTCCTCCGACGCCGTCGCCAAGGCCTACATGGACGACGTCATCTCCCTCGTCCTCGGCAGCTTCATCCTCGCGCTCGCCATCGAGCACTACAACATCCACCGCCGCCTCGCTCTCAACGTACGTGATCCGCGCCGCGAGCCCGTCTTTACCAAGCCCGTTCGTCCGAACCGTGCAACTAACAATCCAAGGAAAACCCGCGAACTTTGTTGCAGATCACGTCGCTGTTCTGCGGCGACCCGGTGAAGCCGCCGCTGCTGCTGCTGGGAATCTGCGGCACCACCATGTTCATCAGCATGTGGATCCACAACACGCCGTGCACCGTCATGATGATGCCGGTGGCGACGGGGATCCTGCAGCGGTTCCCGCGCGTCGACGGGGCGTCGTCCTCGGCGAGCAGCGCCGCGGACGCGCGGGAGGTGCAGCGGTTCTCCAAGGCGGTGGTGCTCGGCGTCGTGTACGCGTCGGCGATCGGCGGGATGGCGACGCTGACGGGCACCGGCGTGAACATCATCCTGGTGGGGATGTGGTCCACCTACTTCCCGGAGCAGCCGCCCATCACCTTCAGCTCGTGGATGTCGTTCGGGCTCCCATTGGCGCTCGTCCTCTTCGTCGCGCTCTGGGCCACGCTCTGCGTCCTGTACTGCTCCAAGAACACCGGGAGGGCGCTCTCAGCTTACCTGGACAGGAGCCATCTCAGGAGGGAGCTCAGCTTGCTTGGTAGGTTCTCGTTCTTGCTCTGTTTGTTTGTTACTTCACGGCAATGGCCAGTGCTCATCAATGGCGTGGTCAATGTTATTCTGGGGTTATCTCTGAAACTCTGACAGCTTCTCGGCCAATATTTCCTGAAACCTGGGTAACTCTGAAATGGACCTCGTTTTGGTCTTTTTCTCCATAACAGTGGCACTCATTGAAATATCAGTGCCATGATAATTATTGCCATAATGGATTCTGATTCGGTTGTCCATCTTGATTTGTGACAGGTCCTATGGCTTTTGCAGAGAAGATGGTTCTAGCCGTTTTTGGGGTAAGTTCCGTTTCCATTTCTGGGGTTATAGCAATTATCTCAACCTGGAAACAGTGTTCGGTTAGAGCATCTCCAACAAAGGGCTAAAATTAAAGCCCCAAAAATCCTATATTGGGGACAGCCAAAAACTAATTTGGCCTATAAAACACCCCCTTCTCCAAGAGATGCCTGAAATTTTAGTTCCCAAAATTTTAAAATTTGCCACATCATCACTGGTGGGCCCTTCTCAACTAATTTTGTGCAGGTTCGTTATTATGACGCGATCATGGAGGGGTTCGTTATAGTGTGACAAAATTTTAATGTATCCATAATTGATTCTTGCAGGGTTTGATTGTCCTATGGATGACGAGGAGCCTGACAGATGATATTCCTGGGTGGGGATCACTCTTCCACGGCGAAGTTGGGGATGGAACTGTCACTGTAAGCGCACCAAGGATCGAACAAATTCTGATTTGTTTTCTCAGAGACGATTTGTCACATGATCTCACGGGACAACAACTTGGCTCGCAATGCAGATCATGATGGCGACGCTGCTGTTCATAATCCCGAGCGGCAAGAACGACGGCGAGAAGCTCATGGACTGGGGCAAGTGCCGGAGGCTGCAGTGGAACATCATCCTCCTCCTCGGCGCCGGCTTCGCCATCGCCGACGGCTTCAGGGCGAGCGGCCTGACCGACATCCTCTCCGAGGGGCTCGGCTTCCTCCGCGGCGCGCCGGCGCTGGCCATCGCGCCCGTGGCGTGCGTCTTCAGCGGCGCCATCACCGAGTTCACCTCCGACGACGCGACCGCCACGCTGGTGCTCCCGCTGCTCGCCGAGCTGGGCAAGTCCATCGGCGTGCACCCGCTCCTCCTCATGGTCCCCGGCGCCGTCGGCGCGCAGCTGTCCTACCTGCTGCCCACCGGCTCGCCGGGCAACGTCGTCGGCTTCAGCACGGGCTACATCAGCATCAAGGACATGGTGATCGCCGGAACGCCCCTGAAAATTGTCGGGGTTGCAGCTCTCACCATCCTACTGCCAACGTTAGGTAAATTAACTGACAAGTGACAACTCTCTAGTCTCTACACAACCGAGAATTCAGACAGTGAAAATACTTGCCGTATCATACTTGTAACTTACTGATTGACGTACAATCCTTTTGCGTTTTCGCGAAGGAAAAAACTTACTGATTTGTTTTCTTGATGTCATGCAGGATCCGTCGTTTTTGGCATGGATCAGAAGCTATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031000