Difference between revisions of "BGIOSGA031343"
(Created page with "{{IndicaGene|
GeneName = BGIOSGA031343|
Description = Japonica Group Os10g0575600 (Os10g0575600) mRNA,|
Definition = Oryza sativa Indica Group BGIOSGA031343, complete gene....") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{IndicaGene| | {{IndicaGene| | ||
GeneName = BGIOSGA031343| | GeneName = BGIOSGA031343| | ||
Revision as of 17:28, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
BGIOSGA031343 |
|---|---|
| Description |
Japonica Group Os10g0575600 (Os10g0575600) mRNA, |
| Definition |
Oryza sativa Indica Group BGIOSGA031343, complete gene. |
| LocusTag |
NM_001072013.1 |
| Ensembl Transcript ID |
BGIOSGA031343-TA |
| Ensembl Protein ID |
BGIOSGA031343-PA |
| Length |
4393 |
| Source |
Oryza sativa Indica Group ORGANISM Oryza sativa Indica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 10:21964800..21969192 |
| Sequence Coding Region |
21969055..21969192,21968706..21968971,21968448..21968565,21968155..21968343,21967544..21968068 |
| Genome Context |
<gbrowseImage1> name=IndicaChromosome10:21964800..21969192 source=RiceIndica10 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=IndicaChromosome10:21964800..21969192 source=RiceIndica10 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ATGGCCGGGGCCTCCTCCTCCGCCGACGCGCTCTTCGCCTCGCCGCTCATCCCCAACCCCGCTCTCGCCGGCTTCATGTCCTCCTCCGCCGCCATGCCCTTCCACCACTTCTCCAACGCCGCCGCCACCTTAATACCTAAGGAGGAGGGGTTGATGGGCGGCCTCCATGTGGCCAAGGACGAGGAGATGGACCTCGAGATGGACATGGAGCTCAGTGGCGGCTCCGGCAGCGCCCACCTCGACGGCCTCCTCAGCTTCGCCGACGTCGACGACGACCACAAGCCGCAGCACAGCGGCCATGACCAGCCGCCCGACGCCGCCCAGCCCAGCGGCGCCGCGGGGGGCAACGCCAAGAAGAAGCGCTACCACCGCCACACGGCGCACCAGATCCAGCAGATGGAGGCGCTGTTCAAGGAGTGCCCGCATCCGGACGACAAGCAGCGGCTGAAGCTGAGCCAGGAACTGGGCCTCAAACCTCGCCAGGTCAAGTTCTGGTTCCAGAATCGCCGGACCCAGATGAAGGCGCAGCAGGACAGGGCGGACAACGTGATTCTGCGCGCGGAGAACGAGAACCTCAAGAGCGACAACTTCCGCCTCCAGGCCGCCATCCGCAACGTCGTCTGCCCCAACTGCGGCCACGCCGCCGTCCTCGCCGACATGTCCTACGAGGAGCAGCAGCTCCGCATCGAGAACGCCAGGCTCAAAGACGAGCTTGACCGCTTGGCCTGCATCGCCACCCGCTACGGCGGCGGCGGCGGACGGCAGCCGGTGCTGTCGACGTCGGCCCTGAGCTGCATCTCGGCGCCGCCGCCGGTCCTCATGCCACCGCTCGACCTCGACATGAACGTCTACTCGCGGCACTTCGCCGAGCAGGCGCCGGTCATGGGCTGCGGCGACCTCATACCGCCACCCGTCGTGCCGCAGCACGATGGCGCGGCGGCGTACATGGGCGCCATGATGGCGCCCGTGCAGGAGCAGGACAAGCAGCTGGTGGTCGACCTCGCCGCCACGGCGGCGGACCAGCTCGCCAGGATGTGCCGCGCCGGCGAGCCGCTGTGGGTGCGGCAGCGTGGCGCGGAGGTGATGGCCGTGGAGGAGCACGCGCGGATGTTCAGCTGGCCGGTGGACGGCGCGAAGCAGGGAGACGGCGGCGCGGTGGCGAGGGCGGAGGGGACGCGTGACAACGCGGTGGTCATCATGAACAGCATCAACTTGGTGGACGCCTTCCTCGATGCGAACAAATGGATGGAGCTGTTCCCGTCGATTGTTTGCAAGGCAAGAACAATCCAGATCATAAACCACGGAGCTGCGTCTGGTCACCTCGGCAGTGGAACTCTCCTCTTGATGCAAGCAGAGGTGCAGTTCTTGTCGCCTCTGGTGGCGGCGCGCGAGGTGGTGTTCTTCCGTTACTGCGTGCACAACGCCGACGAGGGGAGCTGGGCGATTGTGGATTTCCCGGCGGAAGGGTTTGAGGAGGGGCTCCTCCAAGCCTCGGTGGTCAGGTGCCGGCGGCGGCCGTCCGGCTGCATCATCCAGGACATGCCCAATGGATACTCCAGGGTGGTGTGGGTGGAGCACATGGAGATGGTCGGGGAGGAGAAGCCGCTGCAGCCGGTGTTCAGGGACTACGTCGCCAGCGGCGCCGCCTTCGGGGCCACGCGCTGGCTCTCCATCCTCCAGCGCCAGTGCGAGCGCCTCGCCAGTGAGCTCGCCCGTAACATCGCCGACCTCGGAGTGATCCGCACCCCTGAGGCAAGAACAAATATGATGAAGCTGTCGCAGCGAATGATCACCACTTTCTGTGCTAACATCAGTGCTTCTGGAACCCAATCTTGGACGGCCCTCTCGGATTCAACCCAGGACACTATCAGGGTTACAACTCGGAAGAACACTGAGCCCGGACAGCCCAGCGGTGTCATCCTCACCGCTGTCTCCACAAGCTGGCTTCCTTTTACCCATCAGCAGGTGTTTGAGCTTCTTGCAGATGAACAACAGCGCTGCCAGCTTGAGATTTTGTCAAACGGCGGCTCCCTTCATGAGGTGGCACATATTGCAAATGGATCACATCCAAGGAATTGCATCTCTCTTCTTCGCATTAACGCTGCAAGCAACTCGTCACAGAATGTGGAGCTCCTGCTGCAGGAGAGCAGCACCCACCCTGATGGTGGGAGCCTGGTGGTGTTCGCGACGGTGGACGTGGACGCAATTCAGGTGACGATGAGCGGCGAGGATCCTTCCTACATCCCTCTCCTCCCCCTGGGCTTCGCCATCTTCCCTGCCACCAGCCCATCACCTGCTGCTGCACCCACCATCAGCTCAAGCACCACCACCACCACTGGCAATGGCAATGGCGAAACCAGTAGCACTCCTCCAAGAAACAGCAGCAGCAACAACAACAATGCAGATGAGCTGCTGCCTCCCAATGGCTGCCTCCTCACCGTCGGCATGCAGGTGCTGGCCAGCGCCGTACCTTCTGCCAAGCTCAACCTCTCGAGTGTCACTGCGATCAACAGCCATGTCTGCAACGCCATTCACCAGATCACAGCTGCACTCAAAGGTTCAGCAGGTGGTGCTGGGGGTGAGCCGGCGTCCGATCAGTAG</cdnaseq> |
| Protein Sequence |
<aaseq>MAGASSSADALFASPLIPNPALAGFMSSSAAMPFHHFSNAAATLIPKEEGLMGGLHVAKDEEMDLEMDMELSGGSGSAHLDGLLSFADVDDDHKPQHSGHDQPPDAAQPSGAAGGNAKKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQELGLKPRQVKFWFQNRRTQMKAQQDRADNVILRAENENLKSDNFRLQAAIRNVVCPNCGHAAVLADMSYEEQQLRIENARLKDELDRLACIATRYGGGGGRQPVLSTSALSCISAPPPVLMPPLDLDMNVYSRHFAEQAPVMGCGDLIPPPVVPQHDGAAAYMGAMMAPVQEQDKQLVVDLAATAADQLARMCRAGEPLWVRQRGAEVMAVEEHARMFSWPVDGAKQGDGGAVARAEGTRDNAVVIMNSINLVDAFLDANKWMELFPSIVCKARTIQIINHGAASGHLGSGTLLLMQAEVQFLSPLVAAREVVFFRYCVHNADEGSWAIVDFPAEGFEEGLLQASVVRCRRRPSGCIIQDMPNGYSRVVWVEHMEMVGEEKPLQPVFRDYVASGAAFGATRWLSILQRQCERLASELARNIADLGVIRTPEARTNMMKLSQRMITTFCANISASGTQSWTALSDSTQDTIRVTTRKNTEPGQPSGVILTAVSTSWLPFTHQQVFELLADEQQRCQLEILSNGGSLHEVAHIANGSHPRNCISLLRINAASNSSQNVELLLQESSTHPDGGSLVVFATVDVDAIQVTMSGEDPSYIPLLPLGFAIFPATSPSPAAAPTISSSTTTTTGNGNGETSSTPPRNSSSNNNNADELLPPNGCLLTVGMQVLASAVPSAKLNLSSVTAINSHVCNAIHQITAALKGSAGGAGGEPASDQ</aaseq> |
| Gene Sequence |
<dnaseqindica>1..138#222..487#628..745#850..1038#1125..1649#1743..1850#1951..2166#2238..2412#2563..2831#2933..3028#3893..4393#ATGGCCGGGGCCTCCTCCTCCGCCGACGCGCTCTTCGCCTCGCCGCTCATCCCCAACCCCGCTCTCGCCGGCTTCATGTCCTCCTCCGCCGCCATGCCCTTCCACCACTTCTCCAACGCCGCCGCCACCTTAATACCTGTAGGCTAATCTCTTCTTTTCTCTTTTCCTTTCTTTCTTTGCATAGCCTCATGACACTAGCTATATACGTGCGTGCGGTGCAGAAGGAGGAGGGGTTGATGGGCGGCCTCCATGTGGCCAAGGACGAGGAGATGGACCTCGAGATGGACATGGAGCTCAGTGGCGGCTCCGGCAGCGCCCACCTCGACGGCCTCCTCAGCTTCGCCGACGTCGACGACGACCACAAGCCGCAGCACAGCGGCCATGACCAGCCGCCCGACGCCGCCCAGCCCAGCGGCGCCGCGGGGGGCAACGCCAAGAAGAAGCGCTACCACCGCCACACGGCGCACCAGATCCAGCAGATGGAGGCGTACGGTTTTCATCTCCATCTTCTTCTTCCTCTTCAATGCCATTGCCAGCCGTTTCGATCGATTCGTCTCCATTAAACCTTGCTAAACCTTGCTGATATTGTGATACTGACAAGTGGCGTGCATGCATCCATCCATGCAGGCTGTTCAAGGAGTGCCCGCATCCGGACGACAAGCAGCGGCTGAAGCTGAGCCAGGAACTGGGCCTCAAACCTCGCCAGGTCAAGTTCTGGTTCCAGAATCGCCGGACCCAGATGAAGGTACTATATATATGCAAATTAATAATTCCATATATACGCTACTGTATTTGCAAATGCAAATGGCAATATCTTCATGATGCATTGGCTGGGTTGAATATGTTCAGGCGCAGCAGGACAGGGCGGACAACGTGATTCTGCGCGCGGAGAACGAGAACCTCAAGAGCGACAACTTCCGCCTCCAGGCCGCCATCCGCAACGTCGTCTGCCCCAACTGCGGCCACGCCGCCGTCCTCGCCGACATGTCCTACGAGGAGCAGCAGCTCCGCATCGAGAACGCCAGGCTCAAAGACGAGGTCGCTAGCTCCCTAAAGCCCTACCTACCATTCATTCCCAATTCCCAACACATAATACTCCTCCTATATATGCTTCCTGGCTGCAGCTTGACCGCTTGGCCTGCATCGCCACCCGCTACGGCGGCGGCGGCGGACGGCAGCCGGTGCTGTCGACGTCGGCCCTGAGCTGCATCTCGGCGCCGCCGCCGGTCCTCATGCCACCGCTCGACCTCGACATGAACGTCTACTCGCGGCACTTCGCCGAGCAGGCGCCGGTCATGGGCTGCGGCGACCTCATACCGCCACCCGTCGTGCCGCAGCACGATGGCGCGGCGGCGTACATGGGCGCCATGATGGCGCCCGTGCAGGAGCAGGACAAGCAGCTGGTGGTCGACCTCGCCGCCACGGCGGCGGACCAGCTCGCCAGGATGTGCCGCGCCGGCGAGCCGCTGTGGGTGCGGCAGCGTGGCGCGGAGGTGATGGCCGTGGAGGAGCACGCGCGGATGTTCAGCTGGCCGGTGGACGGCGCGAAGCAGGGAGACGGCGGCGCGGTGGCGAGGGCGGAGGGGACGCGTGACAACGCGGTGGTCATCATGAACAGCATCAACTTGGTGGACGCCTTCCTCGATGCGGTCAGTGCAGTGCAGTGATACTGCCATTTTCCACTAGTATATGATGCTTCATTTCTAATCATCTGATTAATGTCGATTAATATTGTTTTGCAGAACAAATGGATGGAGCTGTTCCCGTCGATTGTTTGCAAGGCAAGAACAATCCAGATCATAAACCACGGAGCTGCGTCTGGTCACCTCGGCAGTGGAACTCTCCTCTTGGTAATTACTAACTGATTACTACTCCCCTACTACTGATTGATTAGCTTAGTTGTTTTTGGGATGGATGGGGACTGAAATGCGCGTGGTACATGGCATGCAGATGCAAGCAGAGGTGCAGTTCTTGTCGCCTCTGGTGGCGGCGCGCGAGGTGGTGTTCTTCCGTTACTGCGTGCACAACGCCGACGAGGGGAGCTGGGCGATTGTGGATTTCCCGGCGGAAGGGTTTGAGGAGGGGCTCCTCCAAGCCTCGGTGGTCAGGTGCCGGCGGCGGCCGTCCGGCTGCATCATCCAGGACATGCCCAATGGATACTCCAGGGTACGTACATACGCTTGCATTGGGTGTTAATTTGAGCATGAACATGAATGGAGGTGACAATGGCAATGCAGGTGGTGTGGGTGGAGCACATGGAGATGGTCGGGGAGGAGAAGCCGCTGCAGCCGGTGTTCAGGGACTACGTCGCCAGCGGCGCCGCCTTCGGGGCCACGCGCTGGCTCTCCATCCTCCAGCGCCAGTGCGAGCGCCTCGCCAGTGAGCTCGCCCGTAACATCGCCGACCTCGGAGGTGCGCATTACCACTAGCTATTTGTAAATTGTGAGAATTCAGAATCCACAGTTTGTGTAGAGTTGTGGATTCTGAATTCTCACAATTCACAAAATCCATCCTGACCATTTATGATATAATCTTCTCGATCCCTTTGTTTCTGATTCACAGTGATCCGCACCCCTGAGGCAAGAACAAATATGATGAAGCTGTCGCAGCGAATGATCACCACTTTCTGTGCTAACATCAGTGCTTCTGGAACCCAATCTTGGACGGCCCTCTCGGATTCAACCCAGGACACTATCAGGGTTACAACTCGGAAGAACACTGAGCCCGGACAGCCCAGCGGTGTCATCCTCACCGCTGTCTCCACAAGCTGGCTTCCTTTTACCCATCAGCAGGTGTTTGAGCTTCTTGCAGATGAACAACAGCGCTGCCAGGTACAATGAAGAGCCATATAATATACTCAGTCCATACTGAAAATTGTTGTTGTTCACCTTATAATTCGTTGTGGTCATGTTTGTTAATTTGCCTTTTGCAGCTTGAGATTTTGTCAAACGGCGGCTCCCTTCATGAGGTGGCACATATTGCAAATGGATCACATCCAAGGAATTGCATCTCTCTTCTTCGCATTAACGTGAGTACCCAATTACCACCTCTCTGAATGATGCCATGTTTTTTCGTCCTTGTAGTAGTTAATTTCCTGATTCAAGAGCATGATCATAATAATTGAAGTGCTTAATGGTGCATAATATCTAGTAGCTTTGATGAAAGAGCAAAATCACGACGACTTAGCTAGCTCTTAAATGATTCTGATCAAGAATATTATGTAGTACTTATTGTCTAGGTTTGTCTAGTTTCTTCCATAGTTGCAGAATTATGGATTACTAATGGTGAGCATGTGAATATCTCCCCCCGTCCTGTAGAGTCCTGAAGGGACATGAAAACATGAGTCAATATGCACACGTTGTGTGTTTATGTCTTATACAGTAAAAACTAGAAAAAGATAGGGAAATTAATTATTGTAGTATAAATTGTAATAGCTCAATGGTAGCTACTGAGTTACTGCTGTAACTGCACTCTCTGGTGAAGAACTGTTGTTCAATTCAATAGTTTCAAGCACTCACTGTTTGCTACCAATGCCAAGGACAAGAAATTAACACCGGCTACTTGAACTGTACATGACTCAATATGCCATATTAAATGAGATTTTAGTGGTGTATGCTGGGGCTGTGTGCACATGCATCTCTGAATTTGCTGTCATTACATGGACAGTTTATGTCTGAATCTTTCTTTTTTATTTTCTGATATATATATATTAGCCCCTTTTTTTCATATACTACACGTACACCTTGTAATGCTTACAATCATAATGACCATGCACATAGATTAGCTCATTTCATAATGAGAGTTGCTTACTTTACTTTTTTCCCTCTGCTGATTGAAACTAGATATATAACAAGAGCTGACCTTTTTCCAATTGATAAAAACTGATGTCCAGGCTGCAAGCAACTCGTCACAGAATGTGGAGCTCCTGCTGCAGGAGAGCAGCACCCACCCTGATGGTGGGAGCCTGGTGGTGTTCGCGACGGTGGACGTGGACGCAATTCAGGTGACGATGAGCGGCGAGGATCCTTCCTACATCCCTCTCCTCCCCCTGGGCTTCGCCATCTTCCCTGCCACCAGCCCATCACCTGCTGCTGCACCCACCATCAGCTCAAGCACCACCACCACCACTGGCAATGGCAATGGCGAAACCAGTAGCACTCCTCCAAGAAACAGCAGCAGCAACAACAACAATGCAGATGAGCTGCTGCCTCCCAATGGCTGCCTCCTCACCGTCGGCATGCAGGTGCTGGCCAGCGCCGTACCTTCTGCCAAGCTCAACCTCTCGAGTGTCACTGCGATCAACAGCCATGTCTGCAACGCCATTCACCAGATCACAGCTGCACTCAAAGGTTCAGCAGGTGGTGCTGGGGGTGAGCCGGCGTCCGATCAGTAG</dnaseqindica> |
| External Link(s) |
