Difference between revisions of "BGIOSGA033356"

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(Created page with "{{IndicaGene| GeneName = BGIOSGA033356| Description = MADS-box protein UMS1| Definition = Oryza sativa Indica Group BGIOSGA033356, complete gene.| tag = OsI_34471| tid = ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA033356|
 
GeneName = BGIOSGA033356|

Revision as of 17:38, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA033356

Description

MADS-box protein UMS1

Definition

Oryza sativa Indica Group BGIOSGA033356, complete gene.

LocusTag

OsI_34471

Ensembl Transcript ID

BGIOSGA033356-TA

Ensembl Protein ID

BGIOSGA033356-PA

Length

9759

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:19851229..19860987

Sequence Coding Region

19851229..19851413,19858076..19858154,19859897..19859958,19860058..19860157,19860296..19860337
,19860453..19860494,19860796..19860987

Genome Context

<gbrowseImage1> name=IndicaChromosome10:19851229..19860987 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:19851229..19860987 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGCGGGGGAGGACGGAGCTGAAGCGGATTGAGAACCCGACGAGCCGGCAGGTGACCTTCTCCAAGCGCCGGAATGGCCTCCTCAAGAAGGCGTTCGAGCTCTCCGTCCTCTGCGACGCCGAGGTCGCCCTCATCGTCTTCTCCCCCCGCGGCCGCCTCTACGAGTTCGCCAGCGCCCCCAGCCTACAGAAAACCATCGACCGCTATAAAGCATACACAAAGGATCATGTCAACAATAAGACAATTCAACAAGATATCCAGCAAGTCAAAGATGATACTTTAGGTTTGGCCAAGAAACTTGAAGCTCTTGATGAGTCCAGACGGAAAATATTGGGAGAAAATTTAGAAGGATGCTCTATTGAAGAACTGCGTGGTCTAGAAATGAAACTTGAGAAGAGCCTCCACAACATAAGACTAAAGAAGACCGAGCTTCTGGAGCGGCAGATAGCCAAGCTGAAAGAGAAGGAGCGGACTTTGCTTAAAGACAACGAAAATTTACGCGGAAAGCATCGCAACCTTGAGGCTGCGGCGCTGGTGGCTAACCACATGACGACGACGACGGCGCCGGCGGCGTGGCCGCGGGACGTGCCTATGACGAGCAGCACAGCCGGCGCCGCCGACGCCATGGACGTGGAGACTGATCTGTACATTGGATTGCCCGGCACTGAGCGCTCCTCCAACCGGTCGGAGACAGGTTGA</cdnaseq>

Protein Sequence

<aaseq>MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPSLQKTIDRYKAYTKDHVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGCSIEELRGLEMKLEKSLHNIRLKKTELLERQIAKLKEKERTLLKDNENLRGKHRNLEAAALVANHMTTTTAPAAWPRDVPMTSSTAGAADAMDVETDLYIGLPGTERSSNRSETG</aaseq>

Gene Sequence

<dnaseqindica>1..185#6848..6926#8669..8730#8830..8929#9068..9109#9225..9266#9568..9759#ATGGTGCGGGGGAGGACGGAGCTGAAGCGGATTGAGAACCCGACGAGCCGGCAGGTGACCTTCTCCAAGCGCCGGAATGGCCTCCTCAAGAAGGCGTTCGAGCTCTCCGTCCTCTGCGACGCCGAGGTCGCCCTCATCGTCTTCTCCCCCCGCGGCCGCCTCTACGAGTTCGCCAGCGCCCCCAGGTATACCTTCTTCTCGTTCTCGGCAAGTTCTCGCCGGAAATTATTCTCTCGCTCGTTTCGCCCTCGTCGTGCTGCTGCATCAAATGCAACTGCGATTTCATTCTCTCTCTCTCTCTCTCTCTCTGTGGTAATCGGGTGATTTTTGTGGTTTGGGGGGTTTGAGGATTCGGCTGTTGGGACTGCTTGTTTGTCAGAGTTTGAATTCCTGCCCTTAATTCCGTCGAACAAAAATGGGTTCTCTGTTCGGATTTGGCACCTGCGGATTTGGCCACCGCTGCTGCGACGACGAAGACGACGGCGACGGCGACCGCCGGCCACACACACTACTAGTAGCCTACTAGTTCGTCTTGCTTCTCACTTGCTATTATTGTTATTATTGGAAGCTGTGAACTCCTGTAGAAGTTGACCCCTTCTCTCCCCCTAAATATCTGTACGGCCCTGGAGACCGGATGGATATGCCCACACCTCAGCACTCTCTCACAGTCACCACCAGTTGCCTGTAGTATCTCTTCTTCATTCATCTTCTTCTTCCTCTCACATGTTAACAACTGTTCCATGGAGCATGTCCACGAGCTCTGGATTGATTCTCTGGCGCGTCTCTGTGCATCTTCCTTCCCCATTCGTCGATTCTTGTTCTCGATCCGCGGGAAAATTGACGATTAAAGGAGGCTCCTGACCTCTGAATAAAATCAAGGACAAAAACGTACAAGAAGGCAGAGGTAATAAACCCAAGATAGCCAATAGACAAAGAAAAACCAAAGTAAATGGCAGCCAATGGGAGGAAGGAGGCCGGCCGGCGTGCGTGGCCAGTAATTGCGGGGTAGGAAGAAGGCTGCGAGCCTGCGAGCGTGCGAGACTACAAATGGAGAAACAAGCTAATGTGACATCCGGTCAGTGAGACGAGAGATCATTGGGCGCCTACCTGCACCCTCTCTCTCTCTCTCGATCCACACCACTGCACTGCTCCCCTCTCGATCGTACACTGGCTGATGAGCTAGCCAAGTTGATTTCTCTCGCAAAACGTACCACGGATTGGTCGCATCAGCTCCGTTCGTCGAGGGTATGGTGTGGGGGTATCTTTCCATCATACACAGTATGACGTTGGCCAAGCATGCGATATGGCTGTTTCTGAATATTTTTTCAGTTTTCAGCAGGTCCGAATTTGTTAGGTGGAACCGTGATTTATATATTTCTCCCCTCTTCCTTGTGGATATAGTACTCGTATTGTGTATCTTACTCCTAGTTCTCTTGCACCCACTCCAGCTGGAGAGTGGAGAGAGTGGAGAGTACGTACCTTATCTGGCGCACACTGTACTATAATCCTTATATTTTGGTGATCAGGTGCACCGTTTATTATAGATTAATCATCATCTCTTAGACATGGCTTGTTGCACCTTAATATCCATCTCTTTATCAGGCTTATATGTCTACGGCAGTGAAAAAGCGTTGCCAGTTAATTCATTGTCGTGCATGTAGTTTCCAAACCATAGTCTAGGGAACACTTAATGTTGTTCCATGATATTAAGTGATGTTAAGTACTCCATAACTTAATTAGTACTCCATGCCAATACTCGACAACATAATATTTCCATCACACTTCATATATATGTATGCTCTCCCTCTTTCTCAATTAGGAAGATCTATCTAGAAAATACTTGAGTTTGCAAGCTATGATATGCAACGAACTTTCTTCTAATGTAAGTGCAAAACTATGGATTGTCATTCATTACTTACGTTACTTCTTAATAAACATTATCAAGAAGCTAGATTGTAGAGCATGTAAAGCTGAGTGGAAAAGGAGTTTTGGTAAGCATGTGATTGACATGTCTTATAGGTCGTCGATTGATCTGCCCAAACAACAGTACAAATGAAGTTAATTCTACTGTGAATAGCATGTGATAATGCTTATTCTTAATTGACTCGCAATCCGTAGAATGCTTTGGCTTTAAAACAATAATTTTAAGAGTGTGAGCAATGCTTATGTTACTTCATCAGATTATCGTGTGCCTTAATTCTTATCTGTTGATCATATTTAGTACTCCTCCTACCCATAAATATATAAACACTTGAAGCATTTAAAATTTATCCACAAATATGATGATTATTCCTAGAGTACTACTGATCCCTCTTGCCAAAATAAGTGACCAATTTGGATGTAAAATTTGTTTCAAGATAAGTGATCACATTACAGTGCTACTTGTCTATTAATCACCTCTTGTTCAAACTTCTTATCTTACCTCAACTACCCTCCCACTTCTAAACATCCCTCATTTAGGTCATTTGCCTTTCCTCATTATTTGGCTCATATATAAGTGATAAAGTAGCTTATTCATTTATTTTAGAACAGATCGATGGAGTACTTATTACAACAATCACCCGTCATTCAAATTTCTTTCTAACTTACACTCAACCACCGTCCCACCTCCATCTCTCTATCTTCTCCTCCAACTCTCTCTCTTTTAATGAGGGGCACCAAAATATTTTCTTCTCAACTTTAATCTCTACTAAACAATTTGGCATGTGTATATTTGTTAATGGAGGGAGTATTTTCTAAGTTCTAAGTACTTGATATATATCGTTTAACCAGAAATCTATACCTATGTGAAAAAAATACATTGTCCATAGATCGATCTTTCATGAGTATATTACTGAATCATGCCAAATTTGGCCAATGTTACATATTAATTATGATCTTAAAGTTTGTTCTGAAATTACTTTGCCTTGAATCTTCCAAGCAAGTATATATATACGTGTAGGCACCACACTTCTCATGGTCAAATTTAGATATTTATCAACCTAATTAGTCAGTCCATATATAGAGAGTTAATGCAACTAGCTAGTTGCTTTGTCTAATGTGAGATCTTTTGTACGTGAACTGTAAACATTATATATACGACCTCCATCCCATATTACTTGTCGCTTTGAGTTTTTATTTGTAATGTTTGATCATTCGTCTTATTTAAAATTTTTTTACAATTGTTATTTATTTTATTTATGATTTGCTTTATTATCAAAAGTATTTTAAGTATGACTTATCTTTTTTATATTTGCACTAATTTTTTAAATAAAACGAAGGGTCAAACGTTGTAACGAAAAAGTCAAAGCGACATCTATTGTGAGATGGAGGTAGTATGATCGGTGTGCTGTCTTTAGTCCTGTTTAAGATGCTTAATTTCTCTGAAATACAATTGCTCATAATTACAGTGTTGTTGTCAGTTTTGTCTTCTTTTCCAAATACTTTATTTGAAATATGGATAAATCAAACTTACCTTTTACCCTAATAAACTACACTATACATACTAATCTTAATAACATTTATGCATAACATTTATGGTTTTTGTTCATTCTTTTCAAATCCGTTCCATTCTGGGCAGAATGGGGCAATGCAAGTACTGTCACAAAGAACAAAGAACAGATGGTGCAGCCGGATATGCATATATATATACCAGCTGAATTTTTGGCCGTTTCAGGAAAACTTCAGTTTAAAATCAATGTTGGTATTATCAAATTAATAGCTGCAAAGTCTCCACTAGGTCTAGCAAGAAAGTAGCAGCTCAATGGTAGTAATAACTTCATATGTTTATCGAACAGATATTAGCTTTCTTTAAAAGTCCATTACCAAACAAGGCTTATCTAGGGGCATAGTACCCCCATAGACCCATATGTAGCAGTAACAAAGAGAAAATGATTAATTACAAATATTTTAATGGGCTTGTTTGGCAGGGCTCCAACTCTAAGTACTAGCTAAATTCTGTTCTACCTCTCTAGTTCATTTTATAAAAGCACTCTAGCATTCTCCTCTCTTTGTAGGTGGAGCTGAAACCGTTTGGTTGGGCTCTAGCTCAAGGAGAGGTGGAGTTGGAGCTTTGCCGTATGGGCCCAATGTATACAAAAAATCTCTATAATTTGGTTATAGAGTATTTGTATTTCAATGGGAAAAAGGTATATGTGTTAATAGTATTATACTCTTCTCATAAAAATGAGTGTGAAACTAACTTTTGTAATAATCCTTACTATTAGTTAGCTGAGCTTTAACTATTCTTTAGTGTACAGGCAACACGCCCCAATTCTACAAGTGCTGCAACCAAAGCTTTCAATACTGATTTTGCCGGAAATACCCGTACCGCTTGCTGGTTGTTACTTCTTCCGTTTCATAATGTAAATCATTCTAACATTGCTCACATTCATACAAATGTTAATGAATCTAGACATAAACATATGACTAGATTCATTAACATCTATATGAATGTGGGCAATGCTAGAATGACTTACATTATGAAACGGAGGGAGTATTAGACAAATGTTCAAATCTAAAATTTTGAACTCACTGTGGTTCAGTAACCTGCAGGCAGAGAAAAACAGCATGATTGAAAGCACAGTTTTGCATAAACAATACATCGCAAGTAGATGAAAACTATCAAAACATAATCATCAATAATGATCTGACCAGTCTAAAAAAATCAATAATGATACGCATCAATAGATATAAGTCCATCATGAACAATCATAATGCAATAATCCATCACAAAACCCCTACATAGGGCATACCACAATATTATTCCTTCTCAAATTGTAATTCAAGGTATAACACAATTTCACAGCACACATAAATATCTTATTGATCTTTTCTCTCTTTCCATTAGAGATGTACCTACAGATAACCCTTCAAAGTGAAGATAAATTCATATATAAATTTTCAAATATGTTTTTCTAGATTTTCAAATTATAAAATAAACTGTCCCAGGCAGTTACTAGACGTTGAGATTTCTAACATGGTTGTGCCATCAATGGCTGTTTAATTTCTGTACATATTACATAACATATAGTAGGGTTGTCAATGAGCTGAACTTGAGCACATGGCACATCAATTTCGTTTTCAAGTTGAATGAATGATCTAAATTGACCTTGAGTGAACCTGAGTTGGTGCCAACAACCGATGTTGAAGGTATGCTCTTGCTAAAATTTAATTGAAAACTTGAGCTTTAGCCCGATAAGGTCACACGAACTCTATTTATGCATGTCTGAATGTGTTTCATGCAAAAAAGAAAAGGCATGGCCAATAATTTCGAATCCATAAGGCTTGTTAGCTTACATGTGTTATCCTTCCATGAAAATTATATTCTATATTGGACAAGGTTTCGATTCTTGTTGGTTTATATGGTTGAAACTTTTATGCTTGGAACAATTTCTACGTGATGAATCTTGTTATTATTCCCAAAGAATAGCCAAATACAATATATTTGTTTCTACTAGATAACAACTACATTTTGGCAAGTCAATAATTTTTTTTTGCGAGGAGGCTAGTCAATAATTAAGTAGGCACACTCCTATGCACGCCAATCAGATTATGTTGATTCAGAAACATGCATGCGCACTGCACATAAGATTGCTCATTGAGGTAGTTGCATTATTTATTTAGCTAAGATATTGCCAGCATGGCAATGAAGCAGATATGATGAAAATGGAGGATCCAGAATATATATCCTCAGCTTTTTTTTACAATTGTCAAAAAGTTTAAACCATCACTAGGAAGAGTGAAGCTCTTGCATTGTTCATTTAATTAGGTGGACAACAGAAGGAACAGTTCAGTTTCATAATATATAGCGGTCAAGAAAAAGTTTCATATTATATATAATACATGTGATTTTGTGACTTGATACATTTATCGTAGTATCCATTATTCTTGTTAAACTGAGCCTGCCCTGCCTATGGAATGATTACCTGAAATATTATTTTAGTGGAACTCAGTTATGCCTTTTATATTTTATTAAAGATAGAATTTGATTTTGTGTCCCAATTTTTTGTTACCAGGAAAGATTCTAAAAAAACTCAAAAGATGTTGACTATCTAATCTTTTTGAACAAGATAGATACTTAGAACCAAATTTACACAAAGAATAAAGCATTTTAAAATGTAATACAAGTAGATGTATTTCCCAGTCTGGTTTGAACTGCATACATAAACAAAATTGCTCCAAAGGATGTCTGTCATACTGGCAAATGTAGACATGCTTCTTGAAAAAGTTGGCTCAAAGATGGTCAATTATGCAATGTTTTTTTTCAAATAAATATATATTTTTTAACATATGTACTGAAATTGAACGTTTTGTGATATACACAGAACATGCACCAGTTTAACTTGCAGTCCTGAATTTTATTGATGTTTAAGTGCTTGCGTTCACTTATTGGTAACTATAGAACGTCCATGCATGTGCTATCGTGTGTACAGCTTGGGATGTAACATCTGAATTATGATATAATAAATATCTAGGAAGGTAACAAAATGTTCCTCGCTAGTGCTGGTGTTGATATATTTTCAGAGAAAGCTGGAAGCGCAACTGTCAAATCAACAGCCGCCTATTGGCATTGAAACATACATATCTACCTCTCGTTGTTTCTACTTTTTTTGGCAAGAATTTGGTTGGATATAGTTGGCCATAGGCCTGTAGCCACCACTGTTTGTAGCATCGCAATATGCACAGACAAACATTTGAGCTGCTGAGCTAGCAGAGCTAGCTAGTTTATTGTAGCAGGTTGGAACAAGCACAGCTAGCTCAACTCATGCATGCACTAATAAATTAGAGTATGTATGTTTTTTTGCCCCAGAACGATTATATCATCGATCTTCTGATTTTTAGTTTGCTCCTTGTGTCTGTTCTGCAGCCTACAGAAAACCATCGACCGCTATAAAGCATACACAAAGGATCATGTCAACAATAAGACAATTCAACAAGATATCCAGGTGAATATCTTGCCTCCACACACAATCCGCATATATCATGCAACATATGAAAACTATTTCCTTCTTTTTATGTTGACGAGTTCTTGCGTGATGCAGAAGGTACTGCAATTTAGCAATTAATGGCACAATTTTATCTTGCTGAGTTTTAACTTTCTGGCATGCATTTTAACGTAGCAATGGCGTGTTTGTTAATATAGCTCTAGACTCTATGATTACAAGAAAACAGAATGTACTTGGCTCTCTAGACTTGGCGGTTGGGCGACAGAATAATTAGCCTTGGTGGTTTTCAGTCTATACTTGGCGGTTTTCGACCGCCAAGAACATTCTGTTTTCTTGTAGTGTGGTGTGGTACATTTTGCGGCATCTTCAGTTTTTTTTTTTTTTGAAAGTTGCATCTTCAGTTATTAGTGCTAGCTTAGCTAAGAGAACATACTGCAGTTAATTTAGCAATAAAAGTACAAAGTACCAAACACATTGTAAAGTAGCGCTACATGTAACATGTTCATCAGCTGATCGGTTGTTGGGAGTCCTATTAATTTGCCATTGGTATGTCTATTAATTAAACTAGATAAATACCCCGCCGCGTTGCCGCGGGAAATTAAGTTACATAATATGTACATATATGATGCAATATAATTATTAAAACTAAACAAATTAGTACTTATGAATTTTGAGCCTATAAATAATTGAGATTGCATGGTGTTATGAGAGAAGAAAGAAGGAGACAATTTGAATCATAGATCTATCATCCAAAGGCTAGAAATAATTGGGGTGATGTGACTTAATGAGAGAAGAGAGAAATAGTAATAACTACACTTAGTGTGGATGAACTATATAAGTAGGGATGAAAACGGTCGGAAACGATCGGAAAACAACCTCAACCATTTCCATAATCATATTTTTCTCGGAAATGAAATCAAAAACGGTAATGTCGGAAACGAAAATGATATCGGAAATATCGGAAAACCGGAAACGGAATAATACGGATGGAAACATGTCGGTACAGATCGGAAACCGGTAACAAATACGAAAACGTTAAACTATAGAAAACATATATTTAACTTTACATAAGTATGTTATATGTACAAATAAATTCAAGCTATACTATATAAATTATAAATTAACTCCATTTTAGCCATGCACTCAAGTTAGGGATTTGATTGAAGAATCAATCAATCTCTAAACTGTGGGTCAAGTAGAGACGTGCCCTTTAGATATCAACATATTTAGAAATACGGTAATTACCACATTATAAGAAACGGTAATTTCCATAAGAATACGGTAAATACGGAAACGATCGGTACAACAGCAAAATCATTTCCGTTTCCATTTTCATATTTTTTACCATTTTCATATGGCTCGGCCGGTAGAAAGTCGGAAACGAACGCCAGTCGGCCGGGAATTTCCGTTACCGTTTTCACCCCTATATATAAGTATATAGGATGCCTGCATCCTAGTATCCTACACTTTAGCACCTTCAATTAATTAATTGTTGCAGGTAACTTCTTATTAAGATGAAAAATAATTATTATCTGCATGAGACTTAGCTGAATCAATATTTTCCTAGTTAACTCATATGTGCCAAATTCCATTTGTAATTTCACCAAAAAACATGTGCGGTATAAAAATGTATAGAAGTATTGAAGTACTTCAATATTTTTTGGGGCATATTCTTGAGTATAGTACTATAGCATGTGAACATGCACGTTCTAATTTCTAAGGTTGAATCATATATACTGCAGCAAGTCAAAGATGATACTTTAGGTTTGGCCAAGAAACTTGAAGCTCTTGATGAGTCCAGACGGTAAGCAATCGTGTCTCTTTCTGAGGAGTATGATTACATGATAATCCTGAGAGCCAAAAAAAAAAATCAGTAGTTCACTCTGAATTACATGTGATGCAGGAAAATATTGGGAGAAAATTTAGAAGGATGCTCTATTGAAGAACTGCGTGGTCTAGAAATGAAACTTGAGAAGAGCCTCCACAACATAAGACTAAAGAAGGTTTATATTTAGCTATTTTCAGTACTCCTAATGGCCATGAGAAAATTGAAGGCAAACTTTTCAGAAACTATGAATAATCTTCTGTTTACAGAAATTATTAACACGCATTCTTCTATATTATCTATTCGTTAACACTAGACCGAGCTTCTGGAGCGGCAGATAGCCAAGCTGAAAGAGAAGGTATACAGCCGCAATCAATGCATATTCCTATTCCCTATAGCAATACATCAAACTCCATATATTTTTTTCCCTAACTCTGGATGTTATTTTTTTCCTTGCATCTCTCTGATATTAGGAGCGGACTTTGCTTAAAGACAACGAAAATTTACGCGGAAAGGTAATCAATGATTATGAACAACCGCCTGTTATCAGGCAAAACAACATATACTGCAAACTACCTTTTTCTTCTTTTATCCAGTAAAGCTGCACGTACAGAGTATATCTGATATCTCATGCATGTGCTGATGTGCAGCCTAATTATATTATCCAAATAACCAGATTGATATATGACCCATCAACCACACCATTATTTACATGTGCAATTGATTCATTTTTACAACAAACTTAGGCTGTGTGAATCTGAGATATAAACCATTTCCATTAATTATCTTGAGAAAATGTGCAATTGATCTCTGCAGCATCGCAACCTTGAGGCTGCGGCGCTGGTGGCTAACCACATGACGACGACGACGGCGCCGGCGGCGTGGCCGCGGGACGTGCCTATGACGAGCAGCACAGCCGGCGCCGCCGACGCCATGGACGTGGAGACTGATCTGTACATTGGATTGCCCGGCACTGAGCGCTCCTCCAACCGGTCGGAGACAGGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA033356