Difference between revisions of "BGIOSGA036746"

From RiceWiki
Jump to: navigation, search
(Created page with "{{IndicaGene| GeneName = BGIOSGA036746| Description = BGIOSGA036746| Definition = Oryza sativa Indica Group BGIOSGA036746, complete gene.| tag = | tid = BGIOSGA036746-TA|...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA036746|
 
GeneName = BGIOSGA036746|

Revision as of 18:30, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA036746

Description

BGIOSGA036746

Definition

Oryza sativa Indica Group BGIOSGA036746, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA036746-TA

Ensembl Protein ID

BGIOSGA036746-PA

Length

5068

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:1147375..1152442

Sequence Coding Region

1152227..1152442,1151736..1152116),complement(1150217..1150252,1148394..1148491),complement(1148261..1148310
,1147943..1148007),complement(1147375..1147683

Genome Context

<gbrowseImage1> name=IndicaChromosome12:1147375..1152442 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:1147375..1152442 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGCCGAGAACTTCAGCGTCGACATGGTCAAACTCCTCTTCCGTTACGGCGCATCGGCGAACATCCGCACCAAGGGCGAGTATGTCATTGAGGGCCTCCTCCCTCTCCATGTTGCTGTCGAGAATGCCAGCATGCACAAGTACATTGAGGATCATTGGGCTCATGGGGACCATATCATCAACCTCATCTTCCTCCTTTGTCTTCCTGAGATGAAAATGTTCTTGGACACGACTAGATTAATTGCCAAACAGACAGATAACATTGTCGACGAGGTATGGAATTACATTCGTGAAGAAAAGCATGTCCAGGCAGCAATTTTGCTGCTGGCTGCTCAAAAGCAGCTCCGTGGCCGCCTTAACAACAGCAGTGGCAAAGCCTCTCTGAACGGGTTTGATATTGTTAAAAGCCACATTGATGATGCTCTTAACACCATACATCTTGAGGGGTTAAATATGGTTAAGGAGGGAAAGAATGGCAGGGCACTAAAGAGATTGAAAGACAAGAAGGAAGCCCTTCTTACAGCACTTGTACTAGTTGGCATTGTTCACAAAGCTGGTGAAGCTCTTGAGGGATACATTCAAACTCATTCACAGTTGAGGGCTAACATAAAGGGTAAGATGAGCAAGAAGGTGCGCCATGACGAAATTGTTGAACATGTTTCATCAATTCTAAAAAGCAATGGCATTGCTCATTCTGGGGAAAGCATTGACACTGGAAAACTTGAATGCTACCAACATGGTGGGGGGATGTCGATNGGCAAGTCAGATTCACAAAGAGTGGGCTATGGGGAAACTATTGAAGCGGACAAGTCATCTTCTGATATAGGCGAAGTTAGTAAAATGATCCTGGGAAAGCAACGACCTAAAGGATCAGCCATAGACGAAGTGAGAGATATGTTCTTCCCATACTGGAAATCGGTGTTGTCTCGACGGTTGCAGCTAAAGATAGTTCCATCCTGTCAACTAAGCAGGAAGGACTTGCTAAGTGCTGAAGCGAGCAAGAAGGGGACCAAGAGTATTGACCACCCGTGTAACCCAATCAAATCAATGGGAAATCTTGGTTCGATGGGCTGGCCCCCATTGTCAAGTGAGTCCAGAAGGATGCTTTATACTGTTGCTTCAATGTCCCGGAAGGTGTTTAAGCGCACTTGA</cdnaseq>

Protein Sequence

<aaseq>MAAENFSVDMVKLLFRYGASANIRTKGEYVIEGLLPLHVAVENASMHKYIEDHWAHGDHIINLIFLLCLPEMKMFLDTTRLIAKQTDNIVDEVWNYIREEKHVQAAILLLAAQKQLRGRLNNSSGKASLNGFDIVKSHIDDALNTIHLEGLNMVKEGKNGRALKRLKDKKEALLTALVLVGIVHKAGEALEGYIQTHSQLRANIKGKMSKKVRHDEIVEHVSSILKSNGIAHSGESIDTGKLECYQHGGGMSXGKSDSQRVGYGETIEADKSSSDIGEVSKMILGKQRPKGSAIDEVRDMFFPYWKSVLSRRLQLKIVPSCQLSRKDLLSAEASKKGTKSIDHPCNPIKSMGNLGSMGWPPLSSESRRMLYTVASMSRKVFKRT</aaseq>

Gene Sequence

<dnaseqindica>1..216#327..707#2191..2226#3952..4049#4133..4182#4436..4500#4760..5068#ATGGCTGCCGAGAACTTCAGCGTCGACATGGTCAAACTCCTCTTCCGTTACGGCGCATCGGCGAACATCCGCACCAAGGGCGAGTATGTCATTGAGGGCCTCCTCCCTCTCCATGTTGCTGTCGAGAATGCCAGCATGCACAAGTACATTGAGGATCATTGGGCTCATGGGGACCATATCATCAACCTCATCTTCCTCCTTTGTCTTCCTGAGATGGTTTCTTCTTCATTCAATTCCTATCCCTATTATATTACTGCCAGAGCATTTAGCCTATTTCAAATACTAGCTTGGACCAATAATTAATTTCAGCCACCACTGACATGCAGAAAATGTTCTTGGACACGACTAGATTAATTGCCAAACAGACAGATAACATTGTCGACGAGGTATGGAATTACATTCGTGAAGAAAAGCATGTCCAGGCAGCAATTTTGCTGCTGGCTGCTCAAAAGCAGCTCCGTGGCCGCCTTAACAACAGCAGTGGCAAAGCCTCTCTGAACGGGTTTGATATTGTTAAAAGCCACATTGATGATGCTCTTAACACCATACATCTTGAGGGGTTAAATATGGTTAAGGAGGGAAAGAATGGCAGGGCACTAAAGAGATTGAAAGACAAGAAGGAAGCCCTTCTTACAGCACTTGTACTAGTTGGCATTGTTCACAAAGCTGGTGAAGCTCTTGAGGGATACATTCAAACTCATTCACAGGTAATTGCTGAAATTTCCCCATTGTTACCATTGCTTTCTGATACCTGTGGGTTTTGATTTTTCCAGTTTCGTTTTCTTTAAATTTGTGTGATGCTTACTTCCCATGATTTTGATCTACTAGTGACTCATTTTCTTTAAATTTGTGTGATGCTTACTTCCATGATTTTGATATACTAGTGAAACCTCGAATTACCCTTGTTTTAGAAAGCTGTGGTGGGTGTGGATCGCTTTTCTTTTTCTTTTTGGTGATATGTAAACAGTTGGAGGAGCTCCTGCTGCATTGTATCAACTAGTCACATCCATATTATAAAAAGGAGTTAAAAAGAACTGGACCCATGCAGTTAATGGCATCTTTTAGCCTCCATTTTCATGTAAATCCAAGAGGCTGAATAGCAGGCCCAGCATAGTGGTAGTATACTGCTAGGTTCAGGTCTAATGCATGAGTCAAAAATATATGGAAACATGGGAGTAGATGCAGTGTGTTCTTAATGCGAAGCAAGGTGGCCCACCATCTTTTAGATGCCTACGAGTTTAATGCATAAGTCAAGGTGACACCTTACATCTAAATCTATACAATGTTGCCAACTTCTGTATTACACACATGCTTACCAATTATTGAGCCCATGTACCATTCGTTTCCCCTTTCTAAAGAAGATCTAAGAGGAGGGGAAGAGGTCCTCTTCAGTCTCAGCAGCAGAATGCAAGAAGGGAAAAAAGGACATGTATCCTGTCCAAAGAGGCAGAGCAAAGCGCAAGAAAAAGAACATAGATGAGGGAAGAGGTGCCCTTTCCAAACTAGCAGAGCAAAGCATAGAACAAGAAACAGAGCAGAGAAGAGGGAAGAACAAGTACCTGTCCTGTGCGACGGTTGACAGCTGGGGAAGTGGAGAGCATGAAGGAGAAGCAGACCCGTCGGAGAAATAGGGGCGTTAGGAAGGCAGGCTGGTCCTCTGCATCTCCCCCTTCTCCTTTTCTATCTCTAGGCCACTAGCACCCCTCACACACCAGCCTTTCGACTGTGCACGCCACACTTGCTCTCCCCACATGTGCGTACCCCCATGGCACTTGCGGAAGGCTAAGCGAGCAATATGCTCTCTTCCACTGGTGCTTGGGCGCGAAAGGCGATGCCTTTACGACACTTTAAAAACCAAGAATTGATATTTGCATGAACTATAGAAGAGCATAGGGGTCCATTGAAGGTAAGTTTATCTTTTTGGGATCAGGAACATATAAAATTTGTAGGGAAGATCAATTGTTCTTAAGTATGGTTTGAGAATAAAAATATAATAGCACCCTCCCTTGGATTGGGCTACCTTTTAAAGTGGGACCCCATGTAAGTTTAGCAAAGCAAGTTTTTTAGCTTGGAAACTGAGTCTTTGAGTTTTTGTAAATATTTTCAATTTTATTCATGAATATATGCGTATTCAGCAATTTTAATTATGACTCCATATATATTCAGCTTCTATTCTTTTTTTTTTTTAAGTTGAGGGCTAACATAAAGGGTAAGATGAGCAAGAAGGTGCGTAGTTGTTATGTGGGAGATCATGAGGCTAATAAAGGGAATAGCACTTAGATTATGTCAAGGTAACCTGCAAAAGGGTAGAGATGAATAGATGATAGTGTTAAGGGTGATGGTGGTTTGTCTTTAGCCCCATTGGAGTGGAAACCTGATATTGGATATGCTGCCCTTGTTAATAATATATGTTTGAGTGGAAGTTTATATATTCTTTCTCTAACCATGACTATGACTAGGAATCATCATATTGTTCTCTCAACAAGTCTTTCATATTTTAATTGAATTCAAGCTCTAAGAAATGAACGAAACAAAAGCTGGACTACCCTGAAGCAACTTCTCATAATGACCCAAATTACATGACCAGAAGGCCTGCATTATGGAAGCTTTTGTTGGTGCTGACCAGTTCTTTTTCTTCCTCATTTATTTCTTCTATTCCTCACCTGGCATGTTCATGTAAAACGCAAAACACATGTCGGATTGTTATTTTCTTTCTTATTTATTTGCTTTATTCTACGTGCATGTTAAAGTTTAGTGAGAATGCATGTGTCAAAAATTGTGACCCTCTTTCACCCCACGTCTCTATGCACACGAAGAGTGGGTTCTAATATTTTCTGTTCAACTTTACTTGGGTCTGTTTCGAAGGCCCGCCATTTCACAGCATCCATATATGCCATCATGCCACAATGAATATATCAATAAATTTAAAAAGTGGATGCTTGAAAAGAAAGATTAACCTGAACAATCATGGTATTACCATCATGCCACAACTTAGTTGGCAGTGACGATACATGTTCACATGGTACCTATCATAGGAGAATAATAGTTTAAGCGTTAAGCCTCCACCTTCTCACATCAAGCCTAGCAGAGAAAAGGCCTTGGCTTTTGGTGTCACTTAAGATTCGTTTATCATTAGGCAACCTTCTATAGTTTGTCTTTACTACTTTTTTATTTGTAGTAGGAAAAGTGAAAAATTCTCTGCTGGGGTCCATGGCAATGAAACTGCAAATTCCATGCAACTATCTATACCCCCAGAGTGTAGAACATAACATTGTGACACCACAATATTCTAGAGTTGATTACCATAGAGCATCTGTATAGTTTAGACTGTTATACTTTCAATTCCAAAAAAGTGATCTGGTTTGTAGCAGGTGCAACGGTACCGAAAACAACTCTCACCTGCCAATATTCTGCTTTACACGTGTGCCGGCATAGTGCTGCCATACCACTGTTCTGTTGTGTAAGATCTGTTTTAATTTTCTTCTGCTGTTATACTGTAGTGTCGTCAAGTAATGTGCCATTGGTTCCAGACAAAAAGTATAAGTTGGGCAACTTGGTTGTTTGTTCATCTAGCCAAATGAGATGTTATTGACAAGGCCCTAGTGGGCTTTTTGGTGTTGTCTTGTTTGCGGTGAGCAAGGATGGCAAATAAATCCAAGCTTGGAATAGTAGAGTTGGTTGACTATGGCAGATTGGCAGCATGCCAAATCAATGACTTACTGATTCAACTCTTGACCACTTAGTATTTGTGTAGATGTAGTGCTTAAAACACCATTGTTGACTTTCAGATGGTCTGTACTGTTTGTCTCGAGAGATGATGTTATTGAAGGCTGTTATGTGTCTTGCAACCACCACCACCTGCAAGTGTAGATATCTGAATTCTCGTTTTGGAATAATATCCTTGAACATTTTGTAATGATACGTTTTAACAATTTTCTTGGTGAAATGTAGGTGCGCCATGACGAAATTGTTGAACATGTTTCATCAATTCTAAAAAGCAATGGCATTGCTCATTCTGGGGAAAGCATTGACACTGGAAAACTTGAATGGTTTGACATCCTACTGGCTTTATATATATATTCAGTTCATGTTTTTGTGCATATAATTTATGCGTGATTTATTGTGTTTGAAGCTACCAACATGGTGGGGGGATGTCGATNGGCAAGTCAGATTCACAAAGAGGTGTGTTTCATTTTGGTTGATCCTATTTCTTATTAAAATAAACTAGAAAGGAAAATAGCTGTGAAACTTTATTACGTGTCCACCCATTACAAAGTCATTTGCTGTGGTGAATGCACAACTTTGGAACATTGCAGAAAGCTTATGACTTGCATCCAGCGCAAAAGGGGGTGCAACCAGACTCTGTACACCAACCTCGGAACTATGCTTTCCATTTCATAAGCTGTCTCATGACCAATTTCATTGCTGATTACAGTGGGCTATGGGGAAACTATTGAAGCGGACAAGTCATCTTCTGATATAGGCGAAGTTAGTAAAATGGTAATGAGATACGCAATTAAATTTATTTGTTGAGTCTAATTCATGCTGATGAAATTAGTATGAAAACAAGATTGTTCCTCCAAATTTGCTCCTACTGACCCCTATCAATTAACAAGATATGGAAATATTTGATAACGTAATGCATAACCATCAATTGTTGCCTTATTGGTTAACAACAGAATGAATACTCACTACTTAAATCTGAGTGTTTTTATAATTTTGTTTATGCGTTCAGTTGCTAATTTTCTCATGTAAACAGATCCTGGGAAAGCAACGACCTAAAGGATCAGCCATAGACGAAGTGAGAGATATGTTCTTCCCATACTGGAAATCGGTGTTGTCTCGACGGTTGCAGCTAAAGATAGTTCCATCCTGTCAACTAAGCAGGAAGGACTTGCTAAGTGCTGAAGCGAGCAAGAAGGGGACCAAGAGTATTGACCACCCGTGTAACCCAATCAAATCAATGGGAAATCTTGGTTCGATGGGCTGGCCCCCATTGTCAAGTGAGTCCAGAAGGATGCTTTATACTGTTGCTTCAATGTCCCGGAAGGTGTTTAAGCGCACTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036746