Difference between revisions of "BGIOSGA037561"

From RiceWiki
Jump to: navigation, search
(Created page with "{{IndicaGene| GeneName = BGIOSGA037561| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA037561, complete gene.| tag = OsI_386...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA037561|
 
GeneName = BGIOSGA037561|

Revision as of 18:40, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA037561

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA037561, complete gene.

LocusTag

OsI_38667

Ensembl Transcript ID

BGIOSGA037561-TA

Ensembl Protein ID

BGIOSGA037561-PA

Length

4626

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:17935482..17940107

Sequence Coding Region

17935482..17935702,17937883..17939485,17939628..17940107

Genome Context

<gbrowseImage1> name=IndicaChromosome12:17935482..17940107 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:17935482..17940107 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTAGACCCAGGGAGCCCATTGATACCTCAAAGTGGGCGGAAGTTAAATCCATCAACAACTATGCCCTGTTTATGGGATACATGTCTATGGCCGTCAAGGGACTGGGTTATCTTGTGGTTTTATGGACCACCGTTATTCTTCTCGGTGGTTTCGTCTCCGTGCTTGGGAAGAAAGATTTTTGGTGTCTCACAATAATTACACTTGTCCAAACTGCTGGAGTTTCCGATGTCCTTCTGAACGAAAAACTACAATATATTAGGAGGTCGTTTTCAGGCTTCTTCACGGCCACACTGCATACATTGCTCAGGAAGAGCAAGGATGTTGGTGTTGCGGTTTCATTATGTAAGCCGATCTTGCTCTGTGACTACATCCTGAACGAGTTGGTATTAGTATTCGTATGGGTGGTTCATGTGCTGGTGTTTGGCATCATCCTGTGCCCTCTGGCGGCGTTCTACATATTTGGGCTGCTCATCACCACCGGCCTCTCAGTGTGGCGCCTGATACAGCGCGACTATGGCGAGGCTGATGGAGGTGCGAACCTGCGTCCCGCGCTGAACGTCGTCTACTCCATCGCCGTGCTGCAAGGCGTGCTGTTCTGCTACCGGTTCGCCTCCCGCTCCGTGGGGAGAGAGCTTGTGGTTGATGTGCTCACCAAGTACAATTTCGACTCTTTTGGGAGCTCGAGAGCGTTGGTGGAGTACCTTCACGAGACGAGGACCGGGTGCGAGAAGGACCCGTCGTTCGTGGAAGGACGGAACCTAGTGACCTACGCCGTGGAGCTAACTAGGTCTGAATCCCCAAACGACTTCCTCTCCGGGGCCAGGATCCTGGCCACCCTCCTGGACCAACCCGAGCTGTCGGAGCAGCACAGGATGATCAAGCTGCTTGTCATCTCGGCGTCGTCCAGCCAGGTGCTTGACAAGTTGCTGCAGACGATGGACTGCAATGCGAGACCAAAGAACGCCGAGGCGAGGGAGCTCGCCGCGAGGATCGTGGCGCACCTCGCCGGCAACCTCCACCTCGAGCAGTTCCCTGGAGGGATCCAATTCATAGCCTCACTTCTCGATGGCCCTGTGGAGGAGGAGGAGGAGGACGACGATGACAATATCTACTACCGCGTCCTTCTGGATTACAACAAAGAGCTGATGCGGCAGGGTCTCCTCATCCTTGGGAAGCTCGCTGCAGACGCCAACTGCCGTCAAGCCATCGTCGACACGGAGGGCCTGCTCACCAAGATCATGGAGCCCCTGCGATCCGGCCTGCTCCACCTCAACGGCCATAATGATACATGGTCTGACACGGTGTACGCGTCCATGGAAGTGATGCGCCGGCTCGTCACTGCTCCTGGCAAGACTGGCGAAGAGGTCCGTCGCAGGATCTCAGGCGACATGGAGGCGATGGCTAGCATGGAGAGAATCCTCAAGTGCAAGGAGTGCAGCGACTTGCTGCTGCAATCACTGGAGATTTACACGCGGCTGCACGAGCGCACGCTTTCCAACAAAGAAAGCTGGAGAAGTTTGATCAACATACTTGTACACACCTTCACTCAATTCTACGTCAAAGACGACATCAGAGGATTGGCAGGTGAAAAGCTTGCAGCGCTGTCTTCCCATGGCCATGGCAAAGAAAATGCCAAGATAATCTTGCAAGTGAAAAAGGAGGTGATTGATGATCTCACTAAAATGCTTGCAAACCCAAATGAAAGGAACAAATTCAAAATAAGAGCAGCACAGATCCTGGAGCAGCTGTGTATTCATCTCACTGATGATGATGAATATCTCCAGTACCTCAAGAAAGCCTTAAAGATTGCGATGCCAACGGTGCTTTCGATAGCACTTGGTGAGGGATATCCGAGCAGCAATTTACTGGCAACAGTTTTATCTCTTTGTGCGACGATGTTACGCAATTTCACTAATGCAGAAGATTTCGCTCGCCGGTTCGATGATGAGATTAAAAGTGCCGAATTCAGTTTTCCTTGGAGGGGGATTACAAGTTTTCCTAGGAGGCTTAAGCACATAGTCATGTACAGTTATCCCTCTATCAGCTGCCTGAAAACATTGAAGCTTATCACCGAGATATTCATGCTAATGGTTCGACATGGAAGCCGTTACACCAAAGAAGAGACTGACAGCTTGATGGAATCGCTGTCCGAGGCTGCAGTTGAAATGTCTGATCTTGAGAACTTCATGCTTATATCTCGTAATAACAGAGACGGCACAAAGACTCTTGATTTCATTGTGAAAGAAGCAAAGGAGGAACTCATGCAGAGAGAGAGAGCTCCAGAAACGGGAGAGGTCTAA</cdnaseq>

Protein Sequence

<aaseq>MARPREPIDTSKWAEVKSINNYALFMGYMSMAVKGLGYLVVLWTTVILLGGFVSVLGKKDFWCLTIITLVQTAGVSDVLLNEKLQYIRRSFSGFFTATLHTLLRKSKDVGVAVSLCKPILLCDYILNELVLVFVWVVHVLVFGIILCPLAAFYIFGLLITTGLSVWRLIQRDYGEADGGANLRPALNVVYSIAVLQGVLFCYRFASRSVGRELVVDVLTKYNFDSFGSSRALVEYLHETRTGCEKDPSFVEGRNLVTYAVELTRSESPNDFLSGARILATLLDQPELSEQHRMIKLLVISASSSQVLDKLLQTMDCNARPKNAEARELAARIVAHLAGNLHLEQFPGGIQFIASLLDGPVEEEEEDDDDNIYYRVLLDYNKELMRQGLLILGKLAADANCRQAIVDTEGLLTKIMEPLRSGLLHLNGHNDTWSDTVYASMEVMRRLVTAPGKTGEEVRRRISGDMEAMASMERILKCKECSDLLLQSLEIYTRLHERTLSNKESWRSLINILVHTFTQFYVKDDIRGLAGEKLAALSSHGHGKENAKIILQVKKEVIDDLTKMLANPNERNKFKIRAAQILEQLCIHLTDDDEYLQYLKKALKIAMPTVLSIALGEGYPSSNLLATVLSLCATMLRNFTNAEDFARRFDDEIKSAEFSFPWRGITSFPRRLKHIVMYSYPSISCLKTLKLITEIFMLMVRHGSRYTKEETDSLMESLSEAAVEMSDLENFMLISRNNRDGTKTLDFIVKEAKEELMQRERAPETGEV</aaseq>

Gene Sequence

<dnaseqindica>1..221#2402..4004#4147..4626#ATGGCTAGACCCAGGGAGCCCATTGATACCTCAAAGTGGGCGGAAGTTAAATCCATCAACAACTATGCCCTGTTTATGGGATACATGTCTATGGCCGTCAAGGGACTGGGTTATCTTGTGGTTTTATGGACCACCGTTATTCTTCTCGGTGGTTTCGTCTCCGTGCTTGGGAAGAAAGATTTTTGGTGTCTCACAATAATTACACTTGTCCAAACTGCTGGGTTAGTCTCTTCACAATTCAATTTTCGCATCTCTATTGCTTAATTTCTTGCTATATATTCTTAACTTTTACCTCACAAATAAGTTTTCTTGTTAAGTGTGTTTTGAAGCTATTTCCTGCTAATACTAGTTCTATTTTGTGTATCTTCACTTACTAGCAACTCCAGCATGTAGTAACATCCTATGTGAAAGTTCTGTGGGCATATTATGTTGGGGCTGAACCAAATTATTTTCAATGTGCGAACTACAATTTACCAACCAGCAAACATATTTCACACAATCAACCCCTCATCCTGCTATGAACTTTGAGGATAGTTTCAACTAGCAAATCAGCAGCGGAATAACAATAAACACATGCACACAAGACACGGTGTTTTATGTAGAAAAACCTCCTCGGTGTGAGGAGTAAAAAACCACGGGACCAACGGTCCACTCCAAACTTCCACTATAATCAACAATGGGTACAAATGGAGTATTCTCTAGAACATCTAGAGGCACATCACAACAACAACCATAGCAACTAACAAGAGGTATAACAACAACAAGCAGAGAAATGACAGATTTTGTCCACTTCGGTTCTTAGCTGAGATCTCCCAAATCATACAAATTGCACGAAACTTGGCAGAAATGATGGTCTATAAGTCCCTTCCAAGCTATCCAAAAACCAGCCCAATCAGACACCGTTTGACCCCTCAAACTGACATTCTACCACAGACTGTACACGCTGAAACTGTGGTTACTCGAGCTGAAGAAACCATACCCAAATCTGATGCTCTACTCAACCAATTCCCACCAAAACTGGCCAGATTGAAGTTCACCAAGTGAGAAATAAACTCACCAAGTTTGGTATTGATCCAAGCACGTTTGACCTTCCAATCGCTGACTTGATGAAGACCGGGTTAGAGCCACCAAACTGAAAATCTGCACACCTTTTTCTCCACTCTCCTCTCCTCTCTTGTGTTCTTGCTTGCCTTGTGGTCTCACATTTGGCTGCACAATCTCTCTCACATGGGAGGCTAGGGTTTTCTTCTCATCCACAAATTAAAGAGATGAGGCAATCTTCACCATCCATTCAAGAAATGAATCAACGTCTCAGATTCTTTGGATTTATTGGACTGCACATGGGCTGAGAGCAATGCTCCATGTGAAGGGAATTTAGCCCAACATATTACACACACGTATTAGTGACAGATCCGGAGTTAAATCCAGATCAAGCAAATCTCAACAGCTTTAACCATATTTAATTTGTGTACGACCGGGAGAGACACTATCACTTGTGAATCATTTCCTCTCTATATTCCTTTATGGATTATGGGAGGATGAATTTTATCCTACTGGAAAACTTGTTTCTTTTTTTTTTTTACAAGACCTTGATTTCCTACCAAAGTGTAAAGCAAATATCATCTTGAATAATTTTGTGGAAAAATCTTAAAACTTTATATCGATCTAACTGTAATATATAAACAAATAATTTTTAAATTCATAGTTTGTGACAGTCCAAGAGACAAGATTAAAAAATGGGAGAGTCCCTCATCTCATTATTAGTTAGATAATAGATTTTGAGTGGGAAAGTGTTTTTACCATCCTATATTTGACTTCAAAGCCTGGCTATTCAATATCTTTGACCCAATGGGCAATAGGGTGTGAAGGACTTGTTAGACCATGATGCCTACAGGACTCTGTTTTACCATCTATACACGTTCATTGTTAGACCCAATGGACAATAGGGTGTGAACGAACGAGTCAATTTTTTAAATTGTATTTCTATATGGACTCTGTTTTTTTCTTTTTCTCTGATTAAAGTGTAGGCTTCTTTTTCTATTCCTTTCTATATGGACTTTATTCTTCTTGTAATATTCCTTATTTTCTGAGTTTCAAATTTTTATTATTTCTAAATTGTATATCTATATGGACTCTAACGTATACTTTTAATTTTCTTACTTTTTAATTCTGAATTTCCATTTTCTCTATTGTATACCGGTCTGGACTGTAGTCTTCTCTTCATATATTTCTTATTTTTAATTCTGAATTTCACCTATTTTAAAATTATATTTCTATATGGATTTTGTTTTTTTCTTTTTCTTCGATTAATATGAAAATTTCTAGGCCATGAGAGCAAACGTGGATGCTTATTTTTCTATTCAAGTTAATAGATTTTAACGGTATAAATTCCCCCCTACAGAGTTTCCGATGTCCTTCTGAACGAAAAACTACAATATATTAGGAGGTCGTTTTCAGGCTTCTTCACGGCCACACTGCATACATTGCTCAGGAAGAGCAAGGATGTTGGTGTTGCGGTTTCATTATGTAAGCCGATCTTGCTCTGTGACTACATCCTGAACGAGTTGGTATTAGTATTCGTATGGGTGGTTCATGTGCTGGTGTTTGGCATCATCCTGTGCCCTCTGGCGGCGTTCTACATATTTGGGCTGCTCATCACCACCGGCCTCTCAGTGTGGCGCCTGATACAGCGCGACTATGGCGAGGCTGATGGAGGTGCGAACCTGCGTCCCGCGCTGAACGTCGTCTACTCCATCGCCGTGCTGCAAGGCGTGCTGTTCTGCTACCGGTTCGCCTCCCGCTCCGTGGGGAGAGAGCTTGTGGTTGATGTGCTCACCAAGTACAATTTCGACTCTTTTGGGAGCTCGAGAGCGTTGGTGGAGTACCTTCACGAGACGAGGACCGGGTGCGAGAAGGACCCGTCGTTCGTGGAAGGACGGAACCTAGTGACCTACGCCGTGGAGCTAACTAGGTCTGAATCCCCAAACGACTTCCTCTCCGGGGCCAGGATCCTGGCCACCCTCCTGGACCAACCCGAGCTGTCGGAGCAGCACAGGATGATCAAGCTGCTTGTCATCTCGGCGTCGTCCAGCCAGGTGCTTGACAAGTTGCTGCAGACGATGGACTGCAATGCGAGACCAAAGAACGCCGAGGCGAGGGAGCTCGCCGCGAGGATCGTGGCGCACCTCGCCGGCAACCTCCACCTCGAGCAGTTCCCTGGAGGGATCCAATTCATAGCCTCACTTCTCGATGGCCCTGTGGAGGAGGAGGAGGAGGACGACGATGACAATATCTACTACCGCGTCCTTCTGGATTACAACAAAGAGCTGATGCGGCAGGGTCTCCTCATCCTTGGGAAGCTCGCTGCAGACGCCAACTGCCGTCAAGCCATCGTCGACACGGAGGGCCTGCTCACCAAGATCATGGAGCCCCTGCGATCCGGCCTGCTCCACCTCAACGGCCATAATGATACATGGTCTGACACGGTGTACGCGTCCATGGAAGTGATGCGCCGGCTCGTCACTGCTCCTGGCAAGACTGGCGAAGAGGTCCGTCGCAGGATCTCAGGCGACATGGAGGCGATGGCTAGCATGGAGAGAATCCTCAAGTGCAAGGAGTGCAGCGACTTGCTGCTGCAATCACTGGAGATTTACACGCGGCTGCACGAGCGCACGCTTTCCAACAAAGAAAGCTGGAGAAGTTTGATCAACATACTTGTACACACCTTCACTCAATTCTACGTCAAAGACGACATCAGAGGATTGGCAGGTGAAAAGCTTGCAGCGCTGTCTTCCCATGGCCATGGCAAAGAAAATGCCAAGATAATCTTGCAAGTGAAAAAGGAGGTGATTGATGATCTCACTAAAATGCTTGCAAACCCAAATGAAAGGAACAAATTCAAAATAAGAGCAGCACAGATCCTGGAGCAGCTGTGTATTCATCTCACTGATGATGATGAATATCTCCAGTACCTCAAGAAAGCCTTAAAGATTGCGATGCCAACGGTAAGTAATGTAAATAAATAACAGAATAGATAAATAATATAGTCCTCGCTTGAATCATTACACTTGTCAATTGCCATACTGATTTGTTTAGATAATAGTCATCTATACTGATGAGAAACAAAATTAATTTTATTTGTTGCAGGTGCTTTCGATAGCACTTGGTGAGGGATATCCGAGCAGCAATTTACTGGCAACAGTTTTATCTCTTTGTGCGACGATGTTACGCAATTTCACTAATGCAGAAGATTTCGCTCGCCGGTTCGATGATGAGATTAAAAGTGCCGAATTCAGTTTTCCTTGGAGGGGGATTACAAGTTTTCCTAGGAGGCTTAAGCACATAGTCATGTACAGTTATCCCTCTATCAGCTGCCTGAAAACATTGAAGCTTATCACCGAGATATTCATGCTAATGGTTCGACATGGAAGCCGTTACACCAAAGAAGAGACTGACAGCTTGATGGAATCGCTGTCCGAGGCTGCAGTTGAAATGTCTGATCTTGAGAACTTCATGCTTATATCTCGTAATAACAGAGACGGCACAAAGACTCTTGATTTCATTGTGAAAGAAGCAAAGGAGGAACTCATGCAGAGAGAGAGAGCTCCAGAAACGGGAGAGGTCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037561