Difference between revisions of "Os01g0130000"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os01g0130000| Description = Cation efflux protein family protein| Version = NM_001048455.1 GI:115434323 GeneID:4325974| Length = 3460 bp| Defin...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0130000|
 
GeneName = Os01g0130000|

Revision as of 18:43, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0130000

Description

Cation efflux protein family protein

Version

NM_001048455.1 GI:115434323 GeneID:4325974

Length

3460 bp

Definition

Oryza sativa Japonica Group Os01g0130000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:1672607..1676066

Sequence Coding Region

1672837..1673181,1673255..1673485,1673582..1673662,1673854..1674099,1674247..1674362
,1675735..1675891

Expression

GEO Profiles:Os01g0130000

Genome Context

<gbrowseImage1> name=NC_008394:1672607..1676066 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:1672607..1676066 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggagccgaggacgacgcggcggcggggagagagagacggagacggaggaggatgagacgtggaagctgcgggtgggcgacgacttcaccgtcccggagcgcttccaccgcaagccccccttcttctccaggatcttccccgccggctcccatggaaagcatcggaaaattgcaaaatactacaagaagcaggaaaatctcctgaaggatttcagcgagatggaaaccatgaatgagattggttccttagatcagaatgctcctactgaggaagagttgaggcaaatggcaaagggcgaacgattggccatcaacctgtcgaatatcatcaatctgattcttttcattgggaaagttcttgcatcagttgaaagtttatcgatggcagtaatagcatcgacactggactccctactggatcttttgtcaggtttcatactctggtttactgcacatgctatgaaaaagcccaacaagtatagctatccaattgggaagagacgaatgcagccagtgggcataatagtatttgcatctgtaatgggtacacttggcttccaagtgctaattgaatccgggcgtcagcttatcacaaatgagcaccaagtgttcgaccacaggaaggagctgtggatgatcggcagcatgtcctcagtcgcagtggtgaagttcttcctgatgctctactgccggtcgttcaagaacgagatcgtgagagcctacgcgcaggaccatttcttcgacgtgatcaccaactcggtcggcctcgtcagcgcgctcctcgccgtccggtacaaatggtggatggatccggtcggagccatactgatcgcggtgtacacgatcacgacgtgggctcggacggtggtggagaacgtggggacgctgatcggcaggtcggcgccggcggagtacctgacgaagctgacgtacctgatatggaaccaccacgaggagatccggcacatcgacacggtgagggcctacaccttcgggactcactacttcgtggaggtggacatcgtcctccccggcgacatgccgctcagccacgcgcacgacatcggggagtcgctccaggagaagctggagcaactccccgaagtcgagcgcgcctttgtgcacgtcgacttcgagttcacccatcgccccgagcacaaggccgaggtctga</cdnaseq>

Protein Sequence

<aaseq>MGSRGRRGGGERETETEEDETWKLRVGDDFTVPERFHRKPPFFS RIFPAGSHGKHRKIAKYYKKQENLLKDFSEMETMNEIGSLDQNAPTEEELRQMAKGER LAINLSNIINLILFIGKVLASVESLSMAVIASTLDSLLDLLSGFILWFTAHAMKKPNK YSYPIGKRRMQPVGIIVFASVMGTLGFQVLIESGRQLITNEHQVFDHRKELWMIGSMS SVAVVKFFLMLYCRSFKNEIVRAYAQDHFFDVITNSVGLVSALLAVRYKWWMDPVGAI LIAVYTITTWARTVVENVGTLIGRSAPAEYLTKLTYLIWNHHEEIRHIDTVRAYTFGT HYFVEVDIVLPGDMPLSHAHDIGESLQEKLEQLPEVERAFVHVDFEFTHRPEHKAEV</aaseq>

Gene Sequence

<dnaseqindica>2886..3230#2582..2812#2405..2485#1968..2213#1705..1820#176..332#gctaccacgcgtgcccccagacgtatcagtcggcctcacgcccgcgcgcgccatggatatattctctccagctcggcccagttggacatttcgatcggatgagtacgatcgagttgcgtgctcctgatcatatcgctgcctctgcaccggcctagccaccagcagcaagcaggccatggggagccgaggacgacgcggcggcggggagagagagacggagacggaggaggatgagacgtggaagctgcgggtgggcgacgacttcaccgtcccggagcgcttccaccgcaagccccccttcttctccaggatcttccccgccggctcccatggtcacctactcacgcctcccatcctcaatcctctctcccctttcctgtttaatactagatggttttttttctcttgattgatttccctttgagatcaattctcttagattttctgcatatatactcactcgtactacagtaatactaccagtttagtaatcttcagggagaaaggaaacaaaagatggaaaaagcagctactgctctgatcatgcttcttcttttccagctttactttactcgtgcagcttttttacctcttcccttttttgttcaattcgtgatcgattatattagaatctcggtgtcttgtgatggcttgacccgcactaaacaacacgattgtctttactcatagtattgcagtatactagttgctcggtagactcagctggactcaattctgtcgttccactagtgtctagtctttggttgtagactgacgttaacagcacaagcattattttgatgcgaaggggccgtcatttcagtactgtccatacttctgcatattaagaatatcaacgaagaataaccattttgtctcttgagtcttggcaactaatacgtgaggtgctgctaattctcaagcatcgatgctcatatgaagaatcaaggtgctgacgatttagacacctgaaggaaatttcagtaaattgtgttttaggacatcttttattaaactaggagtggtccaacgtaaaacaacgctaaaattatctagtccaaagtaaaaaagattgattaaagggtgatctaaaatagatcgattaaaagatggcacagactgcaatttactgtattgcaattacatatagacatacttatcaaccttatattggcacatagcattagagatggcccaatggggggtccaaaagagtgatagattttgaggcccagcccgaaaatataatgggccagacagatttttatttgaggaccagcccaaaaaaggaaggaaggctcatacagtcttgttcagtcttttatcttcacctatgaataatgttcttactcaactatgtttgctaattacgtccactgcattaggtccattagtagcaaggaactgaaggaagacacttcccatgctgctaggactctttccaatctggactatatatatttttccttgtgtgaaactgtgaattagcatatgcatttatcctagtggaataccatgtttcaatcgaacagtactttaacttgattgatcaagctgttaaatgcatgtggaacatgctatggactgaaaaatgataagttccattaagcttaattaactatttggtttaacactctcttctttctttgattatttcgtttattagtacttctgagtactgaaaaagtcggtgccccataacaggaaagcatcggaaaattgcaaaatactacaagaagcaggaaaatctcctgaaggatttcagcgagatggaaaccatgaatgagattggttccttagatcagaatgctcctactgaggtaaaatcttgttaagagaacacatttcctcaatgcaatatgcaattgccagatttgtaactataaattggatgctgtatatttctttttttttttgtcttctatacacatagtgatatgaagtatatcttcatgttgttttgttaggaagagttgaggcaaatggcaaagggcgaacgattggccatcaacctgtcgaatatcatcaatctgattcttttcattgggaaagttcttgcatcagttgaaagtttatcgatggcagtaatagcatcgacactggactccctactggatcttttgtcaggtttcatactctggtttactgcacatgctatgaaaaagcccaacaagtatagctatccaattgggaagagacgaatgcagccagtggtaatgactcggttaattaaaatctgttctcttttatcagttttgcattactccgaacttaagctgtgcttttatgctagagatactaaaatgatctagacaaaattccagagttttcagatttcagattacctgcttcttattgcttcatgacaactattggagctaactgaataacctgttattttcagggcataatagtatttgcatctgtaatgggtacacttggcttccaagtgctaattgaatccgggcgtcagcttatcacaaatgtacccacgaacactcttcgtcaaattcataatccattatttatgtgatttatcagctgacactagcttaatctattatatgcaatggccttacaggagcaccaagtgttcgaccacaggaaggagctgtggatgatcggcagcatgtcctcagtcgcagtggtgaagttcttcctgatgctctactgccggtcgttcaagaacgagatcgtgagagcctacgcgcaggaccatttcttcgacgtgatcaccaactcggtcggcctcgtcagcgcgctcctcgccgtccggtacaaatggtggatggatccggtcggagccatactggtgagtgcccccattgctgcctgcctgccactctgctagctactccatgtgagaattaatggtggatatgcagatcgcggtgtacacgatcacgacgtgggctcggacggtggtggagaacgtggggacgctgatcggcaggtcggcgccggcggagtacctgacgaagctgacgtacctgatatggaaccaccacgaggagatccggcacatcgacacggtgagggcctacaccttcgggactcactacttcgtggaggtggacatcgtcctccccggcgacatgccgctcagccacgcgcacgacatcggggagtcgctccaggagaagctggagcaactccccgaagtcgagcgcgcctttgtgcacgtcgacttcgagttcacccatcgccccgagcacaaggccgaggtctgaattctcatttatgcaaattttctcttcacttcacttcacttctgtttctgtttggcttgtacaagtcatcgtttccctgtgaaacccacaaggatgtcagttttactaccactgtctctgtagtctttaagtagctgtgggtgaaactgaattcttgttgttcttgttttattgagaagagaaaactgatcgaattcttctagtggattatatacgctgtcttttgctgg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0130000, RefSeq:Os01g0130000