Difference between revisions of "Os01g0155400"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os01g0155400| Description = Conserved hypothetical protein| Version = NM_001048599.1 GI:115434611 GeneID:4324078| Length = 5880 bp| Definition ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0155400|
 
GeneName = Os01g0155400|

Revision as of 18:44, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0155400

Description

Conserved hypothetical protein

Version

NM_001048599.1 GI:115434611 GeneID:4324078

Length

5880 bp

Definition

Oryza sativa Japonica Group Os01g0155400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:2970130..2976009

Sequence Coding Region

2970369..2970726,2970812..2970882,2972308..2972401,2972502..2972569,2972681..2972747
,2972830..2972960,2973093..2973200,2973577..2973642,2973990..2974056
,2974741..2974816,2975399..2975468

Expression

GEO Profiles:Os01g0155400

Genome Context

<gbrowseImage1> name=NC_008394:2970130..2976009 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:2970130..2976009 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaagagcttttactgaagaaaaaaacatctactgccggagactcccttgagattcgttcccaaaaggttgacaaattaaaggtcttagcaacttccctctctaattcatcttccaaggctgagaagcgtattttggatcacaggcgccagaaagaagaggctcttaacttccgtgctaaaaaggagaatgaagtgagtgcagttgaaaaggagttgacggctgagatttctgaattggagaagcaacgtgacgaacttgaggctcggttgaagaaggtcaacatttcactgaatgctgccattggacgtctcaagcaaacaagggaagagagggatcaatttgatgaagcaaacaatcaaatgatatttagtttaaaagcgaaggataatgaactttcaaaatctattacctcatgtaatgtggaggctggcgtagtcaagacttggatcaatttccttgaggatacgtggcagcttcagtcatcatataatgaacagaaggaaaagagaaccaatgatgagcttgagagatgtacagacaatttcctgaaattgactaaatatcacctttctacattcaaggaaattctgagcccatcaattgagcgaatctgcacatacgtggataatttggcagttctgcagtcaagggacgtgtcaacagaacatgacaatgaggaactatcagaaaagacaagtccacagaaatcccttgaggaagaatatttggaaactgaaaagaagattgtaattgcctttagcatcactgatcacatgaagaagctcttttattctgaacaaggggttaattctaggagggatgatgaggacgtcaggaacttattttctgagatagagaaacttagagagagattcgagtctgtagaacgaccgacgttagacattgaagtccgccgagcaaaggttccaacaaaggagagagctgagtcaagcccttcaccagttcaggtaccttctacacctaaagctgaaactgtggtctccccaaaatctccagcgaaacctgaccagccgctggatcttgattctgaacttgcaaagttagaattagaatttggtcaagttaacaaatactcacctgaagagataagtgggtgggagtttgacgaacttgaagaggagctgagagctgacatctccaaatcgcaataa</cdnaseq>

Protein Sequence

<aaseq>MEELLLKKKTSTAGDSLEIRSQKVDKLKVLATSLSNSSSKAEKR ILDHRRQKEEALNFRAKKENEVSAVEKELTAEISELEKQRDELEARLKKVNISLNAAI GRLKQTREERDQFDEANNQMIFSLKAKDNELSKSITSCNVEAGVVKTWINFLEDTWQL QSSYNEQKEKRTNDELERCTDNFLKLTKYHLSTFKEILSPSIERICTYVDNLAVLQSR DVSTEHDNEELSEKTSPQKSLEEEYLETEKKIVIAFSITDHMKKLFYSEQGVNSRRDD EDVRNLFSEIEKLRERFESVERPTLDIEVRRAKVPTKERAESSPSPVQVPSTPKAETV VSPKSPAKPDQPLDLDSELAKLELEFGQVNKYSPEEISGWEFDELEEELRADISKSQ</aaseq>

Gene Sequence

<dnaseqindica>5284..5641#5128..5198#3609..3702#3441..3508#3263..3329#3050..3180#2810..2917#2368..2433#1954..2020#1194..1269#542..611#aatagatgctgaagctgtagagttgtggaagaaactaaatgagaaggagacatcaagagttcaacaaactcaagaagaccatgcaaaaactacggaaaggacttctgctacaactgttgaggtgttgcctctattgaattatattcaatttgagtaaatgatttactttgctcattttaccaatgagatgttcacataggctttctggacttagttcagttgttgacttacagacagtctcatgcacaaataagattgttcagggccttcaattattctgtttgcacttttgttgatactagtcttattagagcaaacgctgaccatgatagtccaattattactaatactgatcctgctaaatctatgcggtccatctgtgttcggtagttcagtaccacgtggcccaatttggtttgacctgttctgtcttgtatttgaaatgttttctgtttcacattggttttaagaagctaactgaattctctgctttgaccagtcattcaaagaagcactctctgaagtccgattctgctctagaatggaagagcttttactgaagaaaaaaacatctactgccggagactcccttgagattcgttcccaaaaggcatgttttcatgtgaatttatgtatctcaaattttagctggtcaacttatttaactaatattcagcctcatataatgaataagtatcttagtcccatcccatggaatgccatcgcatgtttcttaagtgatttttatgcatgcactcagtaaaacttcaacaagaatatatttaatcttcagctctgcaaatttgcatgcatgcttcactgctctgttatttttgttcctgggtcttcatttttggactttatacattgaagaaatgacctgatgggctatgggactctattctttcttgtgtctgtacttagatttactttctagtttctactgaacaacctttgcactgtgatccatgtttgttggacgtgaggaccgtaaaaatctatttcttctgctaaagttttgcattaacatatgctctgtggacctgtgactgctggtggctggtcaccaatgccactgctggtgattgtatccgtttttgtgttatcttttggttgagctatgtacatgttaagttgttaacatttggggggaaatgcacaggatacaacattaatcccattagctttgcaggttgacaaattaaaggtcttagcaacttccctctctaattcatcttccaaggctgagaagcgtattttggatcacaggtatagctatctgaacttatttctttatgaatcttttgatatcatttgttaaatcttcataacatgttctagaaatttatgttactttagtggtggtttgtttacatcgtaatacctttttgcctttgttttcttggggcttgtgagatagaacagataggccttcacaagttagtttgcctctggggaattcacataaaagggagaaggttcatttttttttgtagagtttttcaattggaaaactaatacagagtagctgtatgaacacttagagaaggttctaaaatatgattatgatgcccactatgttccataatcctatgcacacctgatcttgtcaatttttaccgcagcagttgatgttctttagttccacacttcagatttgcatggcacaatcaagcagtgctcgattcacataatcatgttttgaatttatgtgattttctttagagatttacatctggctggttgtcgttattctggcatttatcaacatcttcttgtctctgagctgtattcattgctggccacaactcaaaagcatataatgttggtcgctagtgtggttgtatgctagaattgtttgttatatatttgaataatgaattcttggtatgagaaactttgtggtgaactggtggtgacctttcaagttgtattgtgccatacggataataggcgccagaaagaagaggctcttaacttccgtgctaaaaaggagaatgaagtgagtgcagttgaaaaggtaagaaccatatctcatgttttggactccttgtactttaagaagttaagaactcatacatttcagatcatggaactcaaattatgactttcataagcagttttggagctttctcttaacttatttcattacatgtgctcacttaaaggaagacatcttgcatgagcacaaggcctttggaccttggtttctgcacatttgatttgtatttgcagaacataagtgcctgcacatgtaatacatatattgcatatgtttacattgtaaaaggaatgcatatgcgggtatttcttcactgtattatctgttgatgctcatccctttttgtgaacgtgtctctggtataggagttgacggctgagatttctgaattggagaagcaacgtgacgaacttgaggctcggttgaagaaggtgccttttccctcatttagaaccttctaaaggatttgtttggttgttggcttccagtgctaggtttgatgtggatatgcagttgttatgtgccatcaattttaaatctaaaaaatgtaagatatttaatcaactgatatgccatcttgtaaataagtttaaagagttatattcctttaaaaatatgaataaaaatgacaaaattggaaatttgctttacaaatatactccagcaccattcaatcgcgttacttttatcaatatatagtgggctggtggagttacatttctgctgaattgtttctataagaattattattgttctgcttaaggttgacattaggtttgtgttctttctatatctctccaccaacaggtcaacatttcactgaatgctgccattggacgtctcaagcaaacaagggaagagagggatcaatttgatgaagcaaacaatcaaatgatatttagtttaaaagcgaaggtgctgatactttatttgttgatctggtttcaattttttttttcagttatatttcttgcaattgattagtgctgtttgttatcaaaatattgatcaacttaatattttgttctcttccctggcatcaatcaggataatgaactttcaaaatctattacctcatgtaatgtggaggctggcgtagtcaagacttggatcaatttccttgaggatacgtggcagcttcagtcatcatataatgaacagaaggaaaagagaaccaagtatgtagtggttattgcctgattagggcctgtggctaaaacatatgtttactaaattcagctttatcttttgtttatgtagtgatgagcttgagagatgtacagacaatttcctgaaattgactaaatatcacctttctacattcaaggtatttggtttgatatataaactgtttgaaaccattgtttcacattccatgtaaacacactttaaatctgtctgctatccactctgatatgtgtgttatgtcttttggcaggaaattctgagcccatcaattgagcgaatctgcacatacgtggataatttggcagttctgcagtcaaggttggccaattgttctttttgatatatacaatctgcagtaaggtctgccagaaaatgaccccaatgatattgcgatcacgtgtttggacgaaatttgtagggacgtgtcaacagaacatgacaatgaggaactatcagaaaagacaagtccacagaaatcccttgaggaagaatatttggaaactgaaaagaaggtccgtaccaagtaccttgattattgcctgaatttacgagaatcgcacgttgattgttattagggtcattactatttcaacgcatttttcttcagaaaacctacaccacggcatcccgtggagacgggatcccctcctcctacctcactcctctccccaaaatcatccaaatcctctcctcctacctcactctcctcccccaaatcacacagcattgcagccctccccgtcgcctcctcttacctcactctcctcccccaaattagacggcactgcagccctccccgtcgccgtcgcccactgctcaccggagccggcggccgtcgccgcaggggaggccgcgacggcgagcgcggtgagcgagagggagaacgggagcggggtgcggtggagccggaacggggtgcggttgcggcgacatcctccatggccggcagcaagcggatctgctacagcgtcggtgatgaagacctccatggccggcagcaggggtgcgccgagcacatcgtcgtccacagccggctgaggaggctggggaggcatggtacaaggtaggcaccagatctgttgcctcctcttcctcctccgccgccccgctgctcgacctcctcgaccccgcgactcctcctcctcctcctctctcttagggtatcacgctgatacccaggtaccaaggtctgatacctaggtaccagctcaatacccagggtaccaggtatcagtcgataccagggtaccaggacctccggaccccgcgactcctcctcctctctcttggggtatcacactgatacccaggtaccaaggtctgatacctaggtaccagctcgatacccagggtaccaagtatcagtcgataccaaggtaccaggggtaccaggtaccagccgataccagtgtaccaggtaccacctcggtaccttacccaaggtaccaggaggatttggcggtgaggtagctgctactctgggtgcttaggggcgacgacgctggcgaggcatcgcgcgtgaggtagctgctactctgggtgctcaggggcgacgacgccggcgaggtatcacccgagcgcgcaataccgaggagaatttttggcggtgaggtagctgctacttcggcaatgacaccggcgaggtaaggtagccactgctccggcgacgataccgagcaggcagtggctaggtatcgagataaatcacgtgttctgtggggtgctcctttatgttgtcgttgcttttttaattatcccgtgagtgcactatttccacggtatcccgtggggtagcagccctctttttctttgggaaaaaaacatttttatttctgcggtacaattcatatcatgaactggtatgttttttagcctattccgcattgcttacaaattagatattttcagtgagctgacaatatgtcaatatttttcagattgtaattgcctttagcatcactgatcacatgaagaagctcttttattctgaacaaggggttaattctaggtactgcaaactcccgtttacatacttatagtttctttcatccttcagagttttggaataactccatttgattttctttccacaggagggatgatgaggacgtcaggaacttattttctgagatagagaaacttagagagagattcgagtctgtagaacgaccgacgttagacattgaagtccgccgagcaaaggttccaacaaaggagagagctgagtcaagcccttcaccagttcaggtaccttctacacctaaagctgaaactgtggtctccccaaaatctccagcgaaacctgaccagccgctggatcttgattctgaacttgcaaagttagaattagaatttggtcaagttaacaaatactcacctgaagagataagtgggtgggagtttgacgaacttgaagaggagctgagagctgacatctccaaatcgcaataaaaaataatgactgcatgttacccacttcgccgtgttctggctctacccgcagttgtatagttgaatgtatagaactttctattgtgttcattgatattgtgttactgtatgaatgcacccaagttaacaaggaattccctatttgtttgttattgtcatggttttatgtaacgtgtacagaaaatatttcagtacgtcacatttgaatgtgcatataaaaagatttaagcttgatattt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0155400, RefSeq:Os01g0155400