Difference between revisions of "Os01g0169500"
(Created page with "{{JaponicaGene|
GeneName = Os01g0169500|
Description = Armadillo-like helical domain containing protein|
Version = NM_001048669.1 GI:115434751 GeneID:4325197|
Length = 144...") |
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| Line 1: | Line 1: | ||
| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os01g0169500| | GeneName = Os01g0169500| | ||
Revision as of 18:45, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os01g0169500 |
|---|---|
| Description |
Armadillo-like helical domain containing protein |
| Version |
NM_001048669.1 GI:115434751 GeneID:4325197 |
| Length |
14468 bp |
| Definition |
Oryza sativa Japonica Group Os01g0169500, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:3558811..3573278 |
| Sequence Coding Region |
3558941..3559303,3559439..3559560,3560596..3560743,3560853..3561491,3562154..3562450 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:3558811..3573278 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:3558811..3573278 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcctcctcctcctccgccgccgcggcggcggcgggggcgggggcgggggcggtggcgttggggcgactcgtcgaccgcacccgcgtccccgaccccaccctgcagcggcacgccgtcgcggccctcttccgccacctcctcacctccgtgcccccgccactcccctccgcggcgcacgacgcgctctcctcgctcctcgcgtcgccgcacccggccgtcgcggcgcacgccgcggcgtccgtcgcccgactcgccgcatcccgcgccgacctcctctccccggagctcgccctcccgctcctcatcgcgcccctctccgcctccccgtccccgcgcctcgcctcctgcttcgtcaaggccgtcgccgcgctcgtctcctgcgcgcttcgctccggctccgccgcgtcgcgcttcccgccccacgatcacccgttcgtccaggcgctcgcctcgggggccgatggcgcgcgcgcggagctgcagcggcaggcggccaggttggtcgccgagggggtacacggggttgtagggtttttgaggccattcgttatgtttgctgcggtgaggaagggggacactgcgttcgtgaaggatttgattggcgcactggccgcagcggctgttgcagcggcaaggccggattctgcagtcccggtgctgaaattgcttgcggagtgcttgctgcattttggccgtggggatggtgaggaagtgcggctctggcttagctccgtggagtgcttggtggatgcttatgtggtattattgaggaagtttgctcatgctcaaatggcaacttatgatgcccaagcaaatagtgtggagttgatagaaatgcttctatcacaatgctcacttcatcaccaatttatgggaaatacttctgttgtacttggattatcaaaacatttgtttttggctcaaaaggaccttggtttatgctatcttccagagatttctgttgttctcagctcccttgctttcattctcagtgggctggagtttgaacatgagcaactgtctggattgaaactactggcctttttgattgagtggagacatgaaaatgcactcagaacaaatgaagcagtacatcacttcagcgaggagattgtttgtgttctgcctgttatcaaccttgttatatctccatctaaatctgtcaaatcagtggcatctcatgttctatcaagatttcacgtgcttgttttagatttgctggcatcttgttcatctgaacaacaggacagctcaatggttcatcacataagcaaacctacatctattcttcctaaacttgtacatcatctatggtctcagtcgtcttcatcgggtttcatttttacaaaatatataactagcagggggttagctgagtctgctggaaattcgaccgaaccaaactattggacacatcaaataaacgagtacctgtcagcccttcgcaaggaaaagctttcactggacagcctgtcttcgaaaaagatacaatcagtagcaatatcatctctgctaagctctgcagtatctgttttggtaatgcacccaaaaattggtacttctgctgctcagtccttggctcttcttggtgcaacagacccaaaactgggtatgccgttgttggtacttatcctcttctatacgaaggtcctgtacagcaacaataactgcgatgcaaatattttgcttagtttgctagagtcattgccatcactcgctgtacatggttttgtgcttccactctcactgcaattgatatcatcaatgcttaaaaaggacgtaaaatcggttctgtatcctatagctgttcgattgctttgcaagatgtggactgtcactgattgggcattccaaaacttgcaaggaactctggatcctgaaaatttttccaattctgttgatgatagagaagttttcacaagtatagctgcatcagtacgtgatgtgtgcaagcagaacccagatagaggcgttgatctcatactatctgtctcggcttgtattgagagtcgtgattctgttgttcaagctcttggcctggagagcctctcctatctctgcgaagaagatgtagttgatttctatactgcctggaaagttatatcaaagcagctgcttgatttttcgatagatcctactgtttcccatggcttatgcattctattgagatggggagcaatggattctgaagcatatcctggaacctcaaaacacttgatacaaatattgtggagcattggaacttacagggagaaaaatgttgaccctctctgggttaaagcaagaggaactgcttttcagtccttgtcccactataagatctcgcttattaaagatgctattcctgatttctggcggataaattatgaatgctttaccactgaacgaaatctggaagttctgaaagcaatggataacttccaggccgagattatcaattttgagcacattaaccgtcgtcgattgactacggataaaataaccacagtgcataaatttgagaagctactggatgctttccctcaggcggtgtttaaaggaaagtcagcgcatcatcggtttcctggtgcagctcttctaactctcaattttaccccgaaggacatccttcatgaagggaaatctaaggatttgcctagagtacatgctgcatatgaacaagcattagtggagatggctgaatctatgtatatatcaagaaatatggtggtagctcttcttgcactgcattcatggaaatcatttgtttcaaattggatgcaagctgttattgcttgtctagacactaaagaatcctcaaagttgaacaaggcttcaaaagcagctgatgatatatttaagattctgtgcaagtgtgttcctgtatccactcctagtgttgttgttagcattgctcttgctattggagcattgtgcttggttgttcctccaacagcccatctagtaatctcttctgcatcagattttcttttgagatggctattccaatatgagcatgaacatcaacagtggtccacggctctttctctgggactaatatcgaattgttttcatcccacggacaaaaggagcaagcttcaggttatcaatggactccttgaggtaatctcaaaaactgaaagctaccttgtaaaaggagcttgtggactcggattgggttattgttgccaagctcttttagccagagcagataatgcagctgattcagaattagaagcgactacacaacttactgagcgtgcatcagttgaagaaattcttcacactttgacgacttcattagttcagctatgtccattttcatgctattccctcaagaagctaagtatttgtggaataaaatccttggaaggaatggaagaaaaatatgttagcttagaagatgatccttgggctgttgcaggacttgttcttggcctgggaaactctgttgtttcactatataggcttggagcttatgaagctattattgaagtcaagaatatattgatatcatggataccagatgtggattctagctctttgttatttgatgaagaagattcggcatcgctatgtatgggctcttgccttgcccttccatctgttttagctttttgccagaaggtggaattgctgaatgatgacttggatgctttgttcaatcgctacacttctttagctactaatctcctgagccttaagaaatctgggactatctttcagaatttgctgatggcgatctgtattggtgctggatctttcctgtcttctatattgaatgatggggtgcatgctatgaaatttactgatgtcaaagatcttcttgacactcttaaacacatatatacccatccatatcctcctcttgtccatttaggaggcatgcttggtactgtcaacgcttttggtgctggtgctggagacctcactgggatctgtcggcagccgacaaattcacaaattaagcacgaaaaggagtcatctttggtgagaggtcctgtactcacaagttctgttggtgagactctttcaacgtcaatgattcaggagatatttcttcttgccaaggatgctgaggatgaccacataaaagattatgctgcatgggctatttcatttcttagaagcaggtggctatcaaagaatcagattatttttgatgatgattgttctcaaagaaattctagtgattccaatcaatcgacaagtttttctgatgaaagcttagtgtggaacttaagtcagtggttgagggatcttaacttcgaaaagcctgatagtatggtgtcaacaagtacagtcgcaactgttttgagatgcctttccaaagctcctagattgccatctatagactggggggttattgtgcggcggtgcatgaatgttgaggcacacattcctgatatgttgacgaatcatcatgatcctaaattattgagggaagaatgcctatatatttctctagctcatgcaagtcatatcagtcctcttctgcactttattgatgatctgacagacttatccagattcaggagattagaaataaatttgcagtccattttgctccaatatttatcaaccctaatgaaactcttctctctctcaagattagacaaattgtctgaggatttaactgagtacttgtattcccccacatcttcgtacttggattactcatctgagcagagaagcatgttaagaacatcattctggaagggcattcgcgagtgtctagtggaggatgtatctgaagagtctagtggtttctcatgtattaagaagtgcattcaaagcttgtcacctctcctgagtctccataaagatggtcagcctgaattcatagaggagtggtctgctgctatcaaatgccttacagttgcacagaaaggtttgctgggtgatatgctgcaggtcgaaatttcgtcatccttcaatgagctagagcatattgatgtggccaaaaagataatcatcagggcaagaatgtgttctagcggttgtggttctgtagatgagctggggaacataaagactacaatactgagtacaaggcttgatggtgtctggtggaatgtccttgttgaagttgctggtgctctatattatgctgatagtcgtatgaaaaagcagtggcttctggatgcattagatattggctgtgttacagcccatccctccacggtactccatttcgttggcctgctatgtggtagctgctgcatctatatgccacttctcattgttaacccaacaaatgtactgagtgacttgcctgtcacccttccttcgtttctctctagcagcatttgggatgacctccggaactctgttgctgataagttatggttgttgaccgctcgcatctacacttgggcagaacagctgactcatagtgtcggcctcgcacgccatgaccatattcatggaagtgaagctgaaatggctatttttcttgccaatattctgcgctgtacttgcattgcagtggaagatcacttggctgttgaaaagaagctaaaacttgcaaacctggaggctctatga</cdnaseq> |
| Protein Sequence |
<aaseq>MASSSSAAAAAAGAGAGAVALGRLVDRTRVPDPTLQRHAVAALF RHLLTSVPPPLPSAAHDALSSLLASPHPAVAAHAAASVARLAASRADLLSPELALPLL IAPLSASPSPRLASCFVKAVAALVSCALRSGSAASRFPPHDHPFVQALASGADGARAE LQRQAARLVAEGVHGVVGFLRPFVMFAAVRKGDTAFVKDLIGALAAAAVAAARPDSAV PVLKLLAECLLHFGRGDGEEVRLWLSSVECLVDAYVVLLRKFAHAQMATYDAQANSVE LIEMLLSQCSLHHQFMGNTSVVLGLSKHLFLAQKDLGLCYLPEISVVLSSLAFILSGL EFEHEQLSGLKLLAFLIEWRHENALRTNEAVHHFSEEIVCVLPVINLVISPSKSVKSV ASHVLSRFHVLVLDLLASCSSEQQDSSMVHHISKPTSILPKLVHHLWSQSSSSGFIFT KYITSRGLAESAGNSTEPNYWTHQINEYLSALRKEKLSLDSLSSKKIQSVAISSLLSS AVSVLVMHPKIGTSAAQSLALLGATDPKLGMPLLVLILFYTKVLYSNNNCDANILLSL LESLPSLAVHGFVLPLSLQLISSMLKKDVKSVLYPIAVRLLCKMWTVTDWAFQNLQGT LDPENFSNSVDDREVFTSIAASVRDVCKQNPDRGVDLILSVSACIESRDSVVQALGLE SLSYLCEEDVVDFYTAWKVISKQLLDFSIDPTVSHGLCILLRWGAMDSEAYPGTSKHL IQILWSIGTYREKNVDPLWVKARGTAFQSLSHYKISLIKDAIPDFWRINYECFTTERN LEVLKAMDNFQAEIINFEHINRRRLTTDKITTVHKFEKLLDAFPQAVFKGKSAHHRFP GAALLTLNFTPKDILHEGKSKDLPRVHAAYEQALVEMAESMYISRNMVVALLALHSWK SFVSNWMQAVIACLDTKESSKLNKASKAADDIFKILCKCVPVSTPSVVVSIALAIGAL CLVVPPTAHLVISSASDFLLRWLFQYEHEHQQWSTALSLGLISNCFHPTDKRSKLQVI NGLLEVISKTESYLVKGACGLGLGYCCQALLARADNAADSELEATTQLTERASVEEIL HTLTTSLVQLCPFSCYSLKKLSICGIKSLEGMEEKYVSLEDDPWAVAGLVLGLGNSVV SLYRLGAYEAIIEVKNILISWIPDVDSSSLLFDEEDSASLCMGSCLALPSVLAFCQKV ELLNDDLDALFNRYTSLATNLLSLKKSGTIFQNLLMAICIGAGSFLSSILNDGVHAMK FTDVKDLLDTLKHIYTHPYPPLVHLGGMLGTVNAFGAGAGDLTGICRQPTNSQIKHEK ESSLVRGPVLTSSVGETLSTSMIQEIFLLAKDAEDDHIKDYAAWAISFLRSRWLSKNQ IIFDDDCSQRNSSDSNQSTSFSDESLVWNLSQWLRDLNFEKPDSMVSTSTVATVLRCL SKAPRLPSIDWGVIVRRCMNVEAHIPDMLTNHHDPKLLREECLYISLAHASHISPLLH FIDDLTDLSRFRRLEINLQSILLQYLSTLMKLFSLSRLDKLSEDLTEYLYSPTSSYLD YSSEQRSMLRTSFWKGIRECLVEDVSEESSGFSCIKKCIQSLSPLLSLHKDGQPEFIE EWSAAIKCLTVAQKGLLGDMLQVEISSSFNELEHIDVAKKIIIRARMCSSGCGSVDEL GNIKTTILSTRLDGVWWNVLVEVAGALYYADSRMKKQWLLDALDIGCVTAHPSTVLHF VGLLCGSCCIYMPLLIVNPTNVLSDLPVTLPSFLSSSIWDDLRNSVADKLWLLTARIY TWAEQLTHSVGLARHDHIHGSEAEMAIFLANILRCTCIAVEDHLAVEKKLKLANLEAL </aaseq> |
| Gene Sequence |
<dnaseqindica>13976..14338#13719..13840#12536..12683#11788..12426#10829..11125#9872..10726#8734..8916#8161..8238#7305..7517#7116..7204#6834..6922#6388..6518#6131..6299#5952..6024#5673..5754#5471..5602#4461..4536#4214..4314#3643..3833#3367..3541#2425..2675#1676..1952#1012..1095#73..783#gagagagagagagagagagagagagagtagactagagacgcctccgcctccgcctccggccaccgcatcgccatggcctcctcctcctccgccgccgcggcggcggcgggggcgggggcgggggcggtggcgttggggcgactcgtcgaccgcacccgcgtccccgaccccaccctgcagcggcacgccgtcgcggccctcttccgccacctcctcacctccgtgcccccgccactcccctccgcggcgcacgacgcgctctcctcgctcctcgcgtcgccgcacccggccgtcgcggcgcacgccgcggcgtccgtcgcccgactcgccgcatcccgcgccgacctcctctccccggagctcgccctcccgctcctcatcgcgcccctctccgcctccccgtccccgcgcctcgcctcctgcttcgtcaaggccgtcgccgcgctcgtctcctgcgcgcttcgctccggctccgccgcgtcgcgcttcccgccccacgatcacccgttcgtccaggcgctcgcctcgggggccgatggcgcgcgcgcggagctgcagcggcaggcggccaggttggtcgccgagggggtacacggggttgtagggtttttgaggccattcgttatgtttgctgcggtgaggaagggggacactgcgttcgtgaaggatttgattggcgcactggccgcagcggctgttgcagcggcaaggccggattctgcagtcccggtgctgaaattgcttgcggagtgcttgctgcattttggccgtggggatggtgaggtatgttgtccttgtctgatgtctcagtgcttatgcttaaacagtcctgaactcctggatgttttagtattgtttaatatgagattagtagatagatcatattgtaggaatgttgctgcatcctgtagtgcctaaattgaatttgtgtgtgtttgttagagtattactttactttgttgtcaaagggatcaacagagtttgagcttatttgtgcttacttttcttcaggaagtgcggctctggcttagctccgtggagtgcttggtggatgcttatgtggtattattgaggaagtttgctcatgctcaaatggtacctctctctcccatttgcttgatttctcgaacggaattcttcctggtttatcccatttgcttgatttctcgaacggaattcttcctggtttattgatattctaagatttactcacattggttatttcattatgaattagagtatcgattaatccatgtacttgtccgtgtttcctgaattagcaacaaacattatatctgtgctcttaatagagctttcatctgctaggatttaggagttatgtaatagattaggaactaattttttggacatgattttttactcagtaattcttaccttgcaaagtttatcaccctccaaaaacacaagttattggggattatgtagttgccttatgtacccacccattttgccaggttttgtttgtggatgttatactgcctatatactgatcactattttttatactggagattgtacttgttctatattggcaatacggctagaaggatctgggcgcattggatgcttactttgttatatttacttgatttcaaatgctattatagtatgagtcatagatatgctataacttgcttcttttaacacttaacaggcaacttatgatgcccaagcaaatagtgtggagttgatagaaatgcttctatcacaatgctcacttcatcaccaatttatgggaaatacttctgttgtacttggattatcaaaacatttgtttttggctcaaaaggaccttggtttatgctatcttccagagatttctgttgttctcagctcccttgctttcattctcagtgggctggagtttgaacatgagcaactgtctggattgaaactactggcctttttgattgagtggagacatgaaaatggtacattttaaatttttattacctctcttcttctagtgagcattgatacaacacacacacacacacacaaagagacgacgacaaccacccctcctcctcctcgcctgttacaactataaaaagtacttgcattgacctaaatagatattcttgtgtatagcagtggttcaagttgatacttcctccgtttcataatgtaagactttctagtattgcccatattcatatagattacatctatatgaatatgtctatatgaatatgggcaatgctagaaagtcttacattatgaaacggagggagtaatttttagctgcactggtttgataggagtaatcactgtattatttatttgcatctctttttctttaggtgcacaatcaaccaaccttttttttgctaacttaacataagattcaatacaatctgatgttttgaggaacactcatattgtttcatgtttatgtttcagcactcagaacaaatgaagcagtacatcacttcagcgaggagattgtttgtgttctgcctgttatcaaccttgttatatctccatctaaatctgtcaaatcagtggcatctcatgttctatcaagatttcacgtgcttgttttagatttgctggcatcttgttcatctgaacaacaggacagctcaatggttcatcacataagcaaacctacatctattcttcctaaacttgtacatcatctatggtctcaggtgaacttttgtcccacctacctgttcgctatattgtcctgatgctgtgcctgtactcccttccctccttttgtgcattgggtagagatgaaaaacaaaactagcatcattccttcttaaagaaaacccttatccatattaaattctaaatttcttcctgcacaagctattcgcaattccatgacaactgactcgtgtatagggagctaggtcagcatatataatatctaaacattataaactttccagtatctgagacttggcatagattcttcaggctttcctttgctgaaatataggatggtgggactccatcacttttaaccttcgacaatatctgatgctgatgtggcatgttattttatatatatatggatacatcgtatgcctaatctgcaatacttccaaatctgaatatataatggttctgtaacattattagttttacaaccatgggtacatagcctgtgcagatgctctgaacttgcgaatttcatgaaaaaataattaggtgcatggttttcaaaagttaaccaaaatggataggtgaaaacatgttctatatcactagaaaattttaataggaggctcaactttgccagatagatatgaaaaaaaagaaacaattacttagtgaatggtaaatttgcactattaactgaatatgcctttttgtatcttataactgcagtcgtcttcatcgggtttcatttttacaaaatatataactagcagggggttagctgagtctgctggaaattcgaccgaaccaaactattggacacatcaaataaacgagtacctgtcagcccttcgcaaggaaaagctttcactggacagcctgtcttcgaaaaagatacaatcaggttgattattgtacctgtccttttgatattcagctttgtatcttgctttacataattctccaaactgattctaacttgttacatcatctaatttcttgcagtagcaatatcatctctgctaagctctgcagtatctgttttggtaatgcacccaaaaattggtacttctgctgctcagtccttggctcttcttggtgcaacagacccaaaactgggtatgccgttgttggtacttatcctcttctatacgaaggtcctgtacagcaacaataactgcgatgcaaatattttggtgagtacattagtttctgctgtacagtgtacaccctttgtgatgttcagtgataaagccatgaaataataatttaaaatggatcatacatgactaaaaatcaaatacaaaatcctaaagtacactaatttcaaatagatcttttactgtccaaattaacatgtcttgcaaattgcaagatgaaaagccacagttgtagaccattaaatctgaacattgatttgcaaaaggataatgactttatttctgtgaatacgggaaacatgatgattattatcaccttcaccttaattagcttaacgcaagtagaaaaagatatctcaaacatcaatgtctgagcagtacatttgaagtgtttctttttctgttacaattcacagcttagtttgctagagtcattgccatcactcgctgtacatggttttgtgcttccactctcactgcaattgatatcatcaatgcttaaaaaggacgtaaaatcgtaagtattctcctgattccttctgcatctggacataattttccagttcatttttcttgtttccttatcacgttatgtgatattctcttcttgttgttgacttgtaacttgttatactatatgatgttctgtcggctaacctgcagggttctgtatcctatagctgttcgattgctttgcaagatgtggactgtcactgattgggcattccaaaacttgcaagtaagactatactttgaattgaacgttttgatgagctttcaaccttccatgcaatgtgtacaagtactttatacttttgagtgttcatattacgaattctgatataagccattagtttgtgagtcagttatgattgcctagagggacaaatttacgcccatatgttccttggtttcaa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