Difference between revisions of "Os01g0175300"

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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0175300|
 
GeneName = Os01g0175300|

Revision as of 18:45, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0175300

Description

Nucleic acid-binding, OB-fold domain containing protein

Version

NM_001048706.2 GI:297596198 GeneID:4327134

Length

2504 bp

Definition

Oryza sativa Japonica Group Os01g0175300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:3867621..3870124

Sequence Coding Region

3867621..3867764,3867855..3868128,3868216..3868315,3868407..3868625,3868702..3868822
,3868908..3869065,3869147..3869522,3869624..3869731,3870053..3870124

Expression

GEO Profiles:Os01g0175300

Genome Context

<gbrowseImage1> name=NC_008394:3867621..3870124 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:3867621..3870124 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaatatcactccaattgcagagctgcgcccagggcgatatgactacatgatatgcgtccgaatatctaggatatgggaatttagaggaactaatgaagatgataacatcaaacatttagatctggttttacttgatcaaaagggagatgctatctatgctgagatcccacctgatgctatacctttattgaaccaatatttacaggaaggaaatatcgtctacatcagcaagataacagttaacaatgctaagcccagttatagagcagttggtaatccatatatgatcaaactaaacaaaagaacttgtatcattgaagccaaagatcaacctatggattttccaaagtatacatttgacttggtgtcatttgataaacttcatgatttcacaagcaagactgatcgttttctagatgttattggaaaaatcattgctgtttctaatgcagcaatgatttctacaagttcatcagattataggatgagaagaatagtcaaactacaagatttaagtggaaaaaccatcgacctctcattatcaggaaaaagagctgttgagtttgatggagagacaatactggaagttggtcaaaataaccatataatagcaatatttgttggtacatcaatgaaaatccttaagggaacatatgaatttctaagtggaacaacagcttgtcgttggtatatcaacgaaaatgacatccctgaaatcaagatgtttcagaaatgccttccaccacatgctgatcctatacaaaagctatacttgcaaagtgatgaagatatgcaacggagcattgaacacaaaacacttgcagaattgaaggaaattgatccttttgttgacaaggatgaaaaataccagtgcactgctactatcattggaattcaggaaagaaaaacttggtgttatcaagcctgtaaattgtgcaattgcaagatgatatgggatggttctatattaaaatgcaagaaagagaactgcccatgtaggcagtatgagtacaagtacaaaataccattcattgcaaatgatggcacagctagccttgaacttgtgctatttgaaaagaaaggtacagaacttattggtaggactgctgaaactatgaaaaggcaatatgatatcaatcaaacacctccagaaataaaagcatggataggacataaattcacattcatagtgaaggttttgccgaacataactatcaacgctgatgaaccttcatttgaggtgctgacaattaaagaaagatttggaaggcaacattccagccaaggctttaaggcaactaagaatcttcccatcagttcaagttcatctcaacaactacataatttacctccactggtgcctatactatccaagaaaatacaacatgagatagaaccaccccaagatattcaaagcatggaagttgaaccatataatttagaaacaagcactttgtcaggaaaaagagcttatgaagatccaaacagtacagatcaggaaaatgatgaagaagaaagcactgactatggcttcattcagacaaagggcaaaaagaagcgttctacctga</cdnaseq>

Protein Sequence

<aaseq>MNITPIAELRPGRYDYMICVRISRIWEFRGTNEDDNIKHLDLVL LDQKGDAIYAEIPPDAIPLLNQYLQEGNIVYISKITVNNAKPSYRAVGNPYMIKLNKR TCIIEAKDQPMDFPKYTFDLVSFDKLHDFTSKTDRFLDVIGKIIAVSNAAMISTSSSD YRMRRIVKLQDLSGKTIDLSLSGKRAVEFDGETILEVGQNNHIIAIFVGTSMKILKGT YEFLSGTTACRWYINENDIPEIKMFQKCLPPHADPIQKLYLQSDEDMQRSIEHKTLAE LKEIDPFVDKDEKYQCTATIIGIQERKTWCYQACKLCNCKMIWDGSILKCKKENCPCR QYEYKYKIPFIANDGTASLELVLFEKKGTELIGRTAETMKRQYDINQTPPEIKAWIGH KFTFIVKVLPNITINADEPSFEVLTIKERFGRQHSSQGFKATKNLPISSSSSQQLHNL PPLVPILSKKIQHEIEPPQDIQSMEVEPYNLETSTLSGKRAYEDPNSTDQENDEEEST DYGFIQTKGKKKRST</aaseq>

Gene Sequence

<dnaseqindica>1..144#235..508#596..695#787..1005#1082..1202#1288..1445#1527..1902#2004..2111#2433..2504#atgaatatcactccaattgcagagctgcgcccagggcgatatgactacatgatatgcgtccgaatatctaggatatgggaatttagaggaactaatgaagatgataacatcaaacatttagatctggttttacttgatcaaaaggtaatactatatcctttatttatattttctcctaacatatatttatcattaaatatatattattttattaaaattgcatggccattgcagggagatgctatctatgctgagatcccacctgatgctatacctttattgaaccaatatttacaggaaggaaatatcgtctacatcagcaagataacagttaacaatgctaagcccagttatagagcagttggtaatccatatatgatcaaactaaacaaaagaacttgtatcattgaagccaaagatcaacctatggattttccaaagtatacatttgacttggtgtcatttgataaacttcatgatttcacaagcaagactgatcgttttctaggtactaaattaacttttatttcattacacgtaaccataatattctatatgcaatgttataatcaaatactttattctatctttgcagatgttattggaaaaatcattgctgtttctaatgcagcaatgatttctacaagttcatcagattataggatgagaagaatagtcaaactacaagatttaaggtaatttatgccaatatcagctatatttccccatctgaacactaacactaatctgaaactacttgatactgactttattgtttcttcaaagtggaaaaaccatcgacctctcattatcaggaaaaagagctgttgagtttgatggagagacaatactggaagttggtcaaaataaccatataatagcaatatttgttggtacatcaatgaaaatccttaagggaacatatgaatttctaagtggaacaacagcttgtcgttggtatatcaacgaaaatgacatccctgaaatcaagatgtttcagaaatggtaagtacaatttaatcccctgcatattttcttttactttatggaatttcctatttctaacatcttatatatgcagccttccaccacatgctgatcctatacaaaagctatacttgcaaagtgatgaagatatgcaacggagcattgaacacaaaacacttgcagaattgaaggaaattgatccttttgttgacaaggttagacttatgtacctaaattaatatactattaaattctttcattgaactacaacttaaacctttcatttatacatttacataggatgaaaaataccagtgcactgctactatcattggaattcaggaaagaaaaacttggtgttatcaagcctgtaaattgtgcaattgcaagatgatatgggatggttctatattaaaatgcaagaaagagaactgcccatgtaggcagtatgagtacaagtgagtatttctttttccaatcatactattaagtgtgaatatatataactataattttcaaataactctgcacttgaacaggtacaaaataccattcattgcaaatgatggcacagctagccttgaacttgtgctatttgaaaagaaaggtacagaacttattggtaggactgctgaaactatgaaaaggcaatatgatatcaatcaaacacctccagaaataaaagcatggataggacataaattcacattcatagtgaaggttttgccgaacataactatcaacgctgatgaaccttcatttgaggtgctgacaattaaagaaagatttggaaggcaacattccagccaaggctttaaggcaactaagaatcttcccatcagttcaagttcatctcaacaactacataatttacctccactggtgcctatactatccaagaaaatacaacatgaggtaaaagagtagtactctttcttttattcatttttgtcggtgctacataatctcttactatttcctttcttttctttcttatttactgctcatcatcccagatagaaccaccccaagatattcaaagcatggaagttgaaccatataatttagaaacaagcactttgtcaggaaaaagagcttatgaagatccaaacagtacagatcaggtaaacaactgatcatatttaaattcatttgtttttcattcttcaatcatacaattaacctactaactgtactgtgcacaagcttggcaccatttcaatcaagtgtatttttttagataatggaatgaaatattcaagcaagtgtataccctgtggtcaacaactattctctatttacatgtactattcacatatatggctgacactaggggtctcatacttgccaaacctactgcctgcattgtgctaagtattgcatgagaaagaattgctggttccttagtaatatactttgataaggattctgtttttcttttttaggaaaatgatgaagaagaaagcactgactatggcttcattcagacaaagggcaaaaagaagcgttctacctga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0175300, RefSeq:Os01g0175300