Difference between revisions of "Os01g0179700"

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(Created page with "{{JaponicaGene| GeneName = Os01g0179700| Description = Similar to GTP-binding protein YPTM2| Version = NM_001048737.1 GI:115434887 GeneID:4325347| Length = 3686 bp| Defin...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0179700|
 
GeneName = Os01g0179700|

Revision as of 18:45, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0179700

Description

Similar to GTP-binding protein YPTM2

Version

NM_001048737.1 GI:115434887 GeneID:4325347

Length

3686 bp

Definition

Oryza sativa Japonica Group Os01g0179700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:4159622..4163307

Sequence Coding Region

4159946..4160042,4160140..4160243,4160378..4160533,4160629..4160700,4161796..4161843
,4161923..4161970,4162295..4162367,4163188..4163201

Expression

GEO Profiles:Os01g0179700

Genome Context

<gbrowseImage1> name=NC_008394:4159622..4163307 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:4159622..4163307 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaatcccgagtacgactaccttttcaaacttctcctcattggtgattctggtgttgggaaatcgtgcttgcttctcagatttgcggatgactcatacctggacagctatatcagcacaattggagttgattttaaaatacggacagtagagcaggatgggaagaccatcaagcttcaaatctgggatactgctggacaagaacgtttcaggacgattacaagcagctattaccggggagctcatggaataattattgtatacgatgtgacagaccaagaaagcttcaacaatgtgaagcagtggttgaatgaaattgatcgttatgcaagtgacaatgtaaacaagctccttgttgggaacaagagcgacctaactgccaacaaagttgtgtcatctgaaacagctaaggcgtttgctgatgagatgggcatccccttcatggagacaagtgccaagaacgccactaatgtggagcaggccttcatggctatggccgcatccatcaaggacaggatggctagccaaccggccgcttcaaatgcaaggccaccgaccgtgcagatccgcgggcaacctgtcaaccagaagacgtcgtgctgctcgtcctaa</cdnaseq>

Protein Sequence

<aaseq>MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVD FKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQW LNEIDRYASDNVNKLLVGNKSDLTANKVVSSETAKAFADEMGIPFMETSAKNATNVEQ AFMAMAASIKDRMASQPAASNARPPTVQIRGQPVNQKTSCCSS</aaseq>

Gene Sequence

<dnaseqindica>3266..3362#3065..3168#2775..2930#2608..2679#1465..1512#1338..1385#941..1013#107..120#ctacttttacgacacctccccaccccccgtctccttctccctcgtctccagatccgtgggtcgaagcagcggcggcgcccgatccacggcggtcactccctccgccatgaatcccgagtagtaagcactcccatccctcacctcctccttccttccttcctatggttcgtgatctccgcccccggtttcgccgtgctgctcgtttggttaggttgcccggatctgagcgggatcccttcgcatggtttcgatccggatctcaacttggtggctaggtttttcgtcttcttcacacgtggttttgacgacgcgcgggttgttttttttgttgacgatgatctcctcattatcacgtcaattgcaaaagggggaattcggcaatcgctcatcacaccatgatttgctgatgtctcatacatatttggggaatgggaattggattttattctaccaggaaatttagtttataatgttgccttatgtgcgtgccaatgtatcatatcagctcatgtccgtctgctctgtagttatgtgtaaaaacattgccatagttttgaatttggatatcttccacaagtactaatactaggcatattggtcccgtttggatatcaacatacttttggagcagatgtatatgcatcattattcagttacttttacctgcatatataagggagtcctaaataatacaatggtctctattgacatttattcatgccatgatttgatagttacctataagggaagttgacttttgggatatggaaagataacattttattgtaaataattcccactactgtaggagtgcattactacatgtgataaaacactgtgttgaaatgaagaaggtagcagttgtatgcatgtaattgttatttcattttctctatgtactgctactgtaacactagttttttcttttggtcaatttcagcgactaccttttcaaacttctcctcattggtgattctggtgttgggaaatcgtgcttgcttctcagatttgcggtacgagtttaactcattgtctcattctcctaattgtgtttttgtactaagtcattctggaataaatagttcttatatgtaaatgtgcttcagtagaaacatgcagtgtaggatcatacctcactattgcaatagcaaagtggttatgataattatgcaagggattccttccattggtcatctttttgttataaacatgaactgtaagatcatgaatccacaattcactcgtattaaataataaagaatcaagcatgaagcttgactaaattttctgttacgtagattgtgaatgttattgatgtacttgcttcctgtgattaggatgactcatacctggacagctatatcagcacaattggagttgattttgtaagtaatatattgttgatttacttgagttaagtttactttttgtagcacagcaataagttgtgcattttgtttgcagaaaatacggacagtagagcaggatgggaagaccatcaagcttcaaatcgtaagattactgctaccttttcttcatcgcttttgatcccgtattgttttttacttgtgctagacaaattcataaataaggatgtccagttatgatgcaatggttattgtgaatgaatctagaaagatatgttctgaaggttatgttcccatatttgtgaaatattggtgctgctcatcggtgaaatttcattttccttgctcgtaatagattctatagattcttgagagtaagttatatggtgtgccctcattgtcaggggtgaaaattgttcagtttatgattttttgcggttgtggcaagatctggtctcagaggatttaccatcttaattgtgttctctttatccaaagggtaaagtctatttttgggccttgaactttgctaagcccatttatcaccctgaactacaaaactggttattttttcaaaacattcaaagccagacacaacaccctgaaccatatgttatggtggttgtcatgaactttaactaggtaagtttcatggtggtggaccttaatatgcataataagagtctgaattaggaaaatcatgtctatttcaaacaaaaccactaacaaattatgtctcagggtgtcttttggctggtttaaaagttgagggtgaaaaataatcgatttctttgtagtttggggtgaaatagtttgaacaacaagttcaagggctaaaaatggaccttacccttatcgaaatatgcatatgatatttttttacccatatttgaatgtgttcgaatgctgaacgttgtatcgacacctgaactcaattctggcaagtatatactttataatattaaaacccagaattgaattcagatatgggctatggagtgctttggtatgtccgtcattgttattgcaaattgtgccactgatgagaaatctttaaatttgtttagaaactattcttttttgagtagcaaactttgagaagtacattaaacttggtgaaatgtgatccatatccatagagtaatctgaagtggagcaatagtccaagtgcatcatgaatttagtatttgaaaatattgttaagactgtggtatgagtatactcttttactttgttacagtgggatactgctggacaagaacgtttcaggacgattacaagcagctattaccggggagctcatggaataattgtaagttggccacatgatccaaccgctattttctgcaaagtattggccatcttgtccctttcattaaactaattcatcctatcttgtgcatgcagattgtatacgatgtgacagaccaagaaagcttcaacaatgtgaagcagtggttgaatgaaattgatcgttatgcaagtgacaatgtaaacaagctccttgttgggaacaagagcgacctaactgccaacaaagttgtgtcatctgaaacagctaaggtaagctctccagagtcatttgattgaatgtgtattggctttgatcgactgtgtattggctttctcaccattgtcatgtgatgctcttatttatacgcctttaacatatctacaatcgttaaaatatcccgcaggcgtttgctgatgagatgggcatccccttcatggagacaagtgccaagaacgccactaatgtggagcaggccttcatggctatggccgcatccatcaaggacaggtacaactttaaatccacatgagcagtgtagctcttgtattaccctcatatctgggtagattttagtaacgaacatcccacctgtcatttttctcaggatggctagccaaccggccgcttcaaatgcaaggccaccgaccgtgcagatccgcgggcaacctgtcaaccagaagacgtcgtgctgctcgtcctaaagataaccaagtctttccttccatgtaaaattcgacgtatgttactactgtttgctcactacaacgtatttgtgatattcatttgaacgcccttgataccatcttttctttaatcagatggttaggcagctgcaaatatatatgtaaccttgctttgttgctctttgctcacgaatcgagaggagcaagcagaaccagtgtatttgattcttttcacgcttacatttttcccatttcattgcatacaagtattctgtgttgaggtttagttagaccggacagcggactgattacaacaattttacaacttgtcacaggtgttgg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0179700, RefSeq:Os01g0179700