Difference between revisions of "Os01g0180300"

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(Created page with "{{JaponicaGene| GeneName = Os01g0180300| Description = Lipoprotein, type 6 family protein| Version = NM_001048741.1 GI:115434895 GeneID:4325351| Length = 4747 bp| Definit...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0180300|
 
GeneName = Os01g0180300|

Revision as of 18:45, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0180300

Description

Lipoprotein, type 6 family protein

Version

NM_001048741.1 GI:115434895 GeneID:4325351

Length

4747 bp

Definition

Oryza sativa Japonica Group Os01g0180300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:4207556..4212302

Sequence Coding Region

4207812..4209587,4210056..4210291,4211857..4212145

Expression

GEO Profiles:Os01g0180300

Genome Context

<gbrowseImage1> name=NC_008394:4207556..4212302 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:4207556..4212302 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggtacctcctcctcgcgccgtcgccggcgccgcggccgctcgcgttccggtgccgccgaggaggccgcgcgcggagaggcgcggccatcgtcgcgtcgagctcggcgtcgtcgtcgtcgtcgtccggtgatgccggcccatcccactcggcggcggcggcgggggcgtacgtgctggcgcggcggggcgtgctcctcggcgtctcggcgctcccgctcctccgcgccagggaagccgcggcggcggccgcggtggccacgcctaacagcggggatctcgcaacggagacaaaggatattcaaaagcctgatgaacctcagcctggggaaactcaggctgaatctcctctacctgaagctttgcaaccagaatcatccctgcccgtcacgcaagaacaaactcctgggaatccactttctggtcttttgaatgcaattgcagttgctgcctccggtgttcttgctggactgtatggcacttctcaacaggaaaagaaggccctggaatccgtcgtctcatctatggagagcaaactggctgaaaatgaggcagcaatctcattgatgagggaaaactacgagaaaagattgctggatcaacaaacagcacaaaagaagcaagcaatgaagtttcaggagcaggaagcctctcttttagatcagttgtcttcaacaaaaaagacggtaacttcgctaagtgaagaattcagaagggagaagacactggctgaggagcttagggaagaaatacgtcgactagagagcagtcttgcacaagctggggatgacaaagatgttcttgaagccaaactgaaggaaaagttgggtgatgtcaacattttgcaggaaaaagtaagtttgcttagccaagaaattgataataagggtatacgcatcagggaactcagttcattactttcgtcaaaggaagcagactaccgtaatctgtgctctttctctgaccaaactaaagagagtctagaacttgcagaagctaaaatacagcaactggaggaagaggttcatagaactagaaatgatctttcttctaagatatcttcaattgatttactgaatgaggaacttcaagcactgaactctgcaaagaatgaagctgaggaaaagctaagtgagttaacaaaagattatacagacctgaaggcttcttctgaagcaagagagagccgcaactctgagctactattagaaaaagataatatgatcaaacagcttgatggaaaactctctgatgcattaagtgattctagcaaagaccgtgagaacatcgctgcgctgaacaaggaattggatgcaacaaaagcaatgctagagaatgaagttgctgcagttaaaagtttaagagaatcacttcaatccacagaggaggcactgacagattccagaagtgaggtatccaaactttcagtggaacttgatgaagcaaatagaatgaaccaggacctggtgctgcaaatttctaaactccaggatgagttcaatgaaatgcaagagggccttactaacaaactaggagaggtagaatcagtatctaaagctctgtcagacgaacttgtctctgttaaggagatggttcacaagggacaggaagaacttgaagccacttctaatgagcttgcatccattgtggaagctcgtgacaacctgaagaaagaattgctcgatgtgttcaagaagttggaatccacgtcacaggagcttgttgatgaaaggaaaactgtcactactttgaatagggagcttgaggctttggtgaaacaactacagatggattctgaagcacgaaaagctcttgaagcagacctggatgaagcaacaaagtcactagacgagatgaacaggagtgcattatcactatcaaaggagctagaggaaactaattctaggaaggacactcttgaagcagagaaaaaaatgttatcaaaggctcttgctgagcaacagaagatcacaactgaagctcatgaaaacactgaggatgctcagaatcttatctctaggcttcagactgagaaggagagttttgaaatgagggctagacatcttgaagaggagttggcgttagcaaagggtgagatattgcgcctaagaaggcagattagtacaagcagatcacagaaagcaaaaactcttccaaacacaaatgcatctccagaggtcagtcaggctccagacgagcagcctgtgaatgataatcagaataccagcaaagttgctgctgggtctcaatatactgcaaagaggacgactaggagaagaaaaggtggtgcatcaacgtga</cdnaseq>

Protein Sequence

<aaseq>MGYLLLAPSPAPRPLAFRCRRGGRARRGAAIVASSSASSSSSSG DAGPSHSAAAAGAYVLARRGVLLGVSALPLLRAREAAAAAAVATPNSGDLATETKDIQ KPDEPQPGETQAESPLPEALQPESSLPVTQEQTPGNPLSGLLNAIAVAASGVLAGLYG TSQQEKKALESVVSSMESKLAENEAAISLMRENYEKRLLDQQTAQKKQAMKFQEQEAS LLDQLSSTKKTVTSLSEEFRREKTLAEELREEIRRLESSLAQAGDDKDVLEAKLKEKL GDVNILQEKVSLLSQEIDNKGIRIRELSSLLSSKEADYRNLCSFSDQTKESLELAEAK IQQLEEEVHRTRNDLSSKISSIDLLNEELQALNSAKNEAEEKLSELTKDYTDLKASSE ARESRNSELLLEKDNMIKQLDGKLSDALSDSSKDRENIAALNKELDATKAMLENEVAA VKSLRESLQSTEEALTDSRSEVSKLSVELDEANRMNQDLVLQISKLQDEFNEMQEGLT NKLGEVESVSKALSDELVSVKEMVHKGQEELEATSNELASIVEARDNLKKELLDVFKK LESTSQELVDERKTVTTLNRELEALVKQLQMDSEARKALEADLDEATKSLDEMNRSAL SLSKELEETNSRKDTLEAEKKMLSKALAEQQKITTEAHENTEDAQNLISRLQTEKESF EMRARHLEEELALAKGEILRLRRQISTSRSQKAKTLPNTNASPEVSQAPDEQPVNDNQ NTSKVAAGSQYTAKRTTRRRKGGAST</aaseq>

Gene Sequence

<dnaseqindica>2716..4491#2012..2247#158..446#gcggtgacgccgtctccgcctccgccttcgccatcgcctaatcctcacctcacctccgccattttcactgcgggcttccgcttccgagctcgaaggcgagcgccaccgcgaggagggggggctagggttttggggttgtcgcgtcgtgggggacgggatggggtacctcctcctcgcgccgtcgccggcgccgcggccgctcgcgttccggtgccgccgaggaggccgcgcgcggagaggcgcggccatcgtcgcgtcgagctcggcgtcgtcgtcgtcgtcgtccggtgatgccggcccatcccactcggcggcggcggcgggggcgtacgtgctggcgcggcggggcgtgctcctcggcgtctcggcgctcccgctcctccgcgccagggaagccgcggcggcggccgcggtggccacgcctaacagcggggatctcgcaacgggtgagtgccattctcctttccaggagttggttgaattccgttctcgttttgtgtttctcccagcctggatactattcggtctggcattgtggagtaccatatgaaatctgtgtgcgatttgaatcatttatggttgggctttaaattttctgtaatgtccaattgtatagattgttttgtggattcagtcatggagattactgctaacgtacagcgttgcattatatggacgttttagctccacatgagaaatctgaactttctgttcaggctaatggtggaagagtttacaatgtatctgctaacaaatgctgctaagcaattatgtatgcatgggacaagcgcaatcgctttccttgagcagggatacgcatggatggaaaggaattaggaggttggaatagcacaattcccacaagcagagactatttctgcaaacatacacatgttgaatgtgattctatatggacttctacatgttaatacctcaattagcactagagtggaactatcagatggaagaatggacctagaatgtcacagtgatcgtttgtactggtgcaaaaggtagaaagagtttgtaaatgctttatgcagtaagatatttttacatgaaggtggtcttggctgtagatggctcatctaagtaaactgtacacttacagtatatcatcttaccctttgtaccccttttgtataggttttgtgcaaacaaattcattttcattctgttgaccagttttgaaatggaacaaatccactatgtgaggtgcagtggatgatttatgattgccattccatgtgttaggcatcctgagtacaccacgcggattccctatgcattttggaactagggataagggaagttttgataaatttataagctgaatttggctggtatttgcatggaagtgtgttgttttaataaaaaataatttcacattctgatgacaaagtctcaaactggagtcatgcatgctcattattcacaacttatcccagtgaattttgagtctgattatggcatgtgaccatatgtcattttttcttcattttcccgcagtttatggcatgtcatttccccaaggatttattagaagaaagcgggttgatttcccaaggatagatcatcaagctcagacttgctacaaaactttcaagattggacgtaatactgtcatatgtagacctaatgaggctattgtcgatggtcagaatttccccctcatacaagtagctcatactaaatacggggtctatgattatgttagcgaaccctgtcgtggtctactaccatgtgctgcattatttttgttttctggcataaatactttgaggtgtacctgcaaagttcttttgacctatcttaaccactggaatgtgttggatttactatatggttcttttgtaaactggtattgggacctgggcatgtgatattgtttggattgattttgttggtgctgccttcctgtcatctcatgttggcgcttgcatattaggactaatttggaaatatcctgtacaaacttggaataaatagtttatattgtttttctctgtagagacaaaggatattcaaaagcctgatgaacctcagcctggggaaactcaggctgaatctcctctacctgaagctttgcaaccagaatcatccctgcccgtcacgcaagaacaaactcctgggaatccactttctggtcttttgaatgcaattgcagttgctgcctccggtgttcttgctggactgtatggcacttctcaacaggaaaagaaggccctggaatccgtcgtctcatctgtaaaacatctgcaaacctgtaattagtgtccattactactgtttctattttactacttttgaagtgtcccatgacatccttgcatagtcaaatttccacgaagtaaccatctttgcatgcatacacattaaagagttgtacattccgtgattgcatacatatgcttgtgtgttttgtttattttcttttatctagaaaatctgtgcaccctcaagtttataacctgataactaacaaagtatagaactcatgaagagcttaaaaagttttaactcattttccgtcatgatgtttccccttaggaaaacaagcgttgcttaagttctcacagcacaatataactcagatttatatgcaagaggctaccaaaactattttatgtacctctcatacttgaaaacctttttaaaaaatgatgtgctaatataggacattagctgacatatccattttgctaacttgttcagatggagagcaaactggctgaaaatgaggcagcaatctcattgatgagggaaaactacgagaaaagattgctggatcaacaaacagcacaaaagaagcaagcaatgaagtttcaggagcaggaagcctctcttttagatcagttgtcttcaacaaaaaagacggtaacttcgctaagtgaagaattcagaagggagaagacactggctgaggagcttagggaagaaatacgtcgactagagagcagtcttgcacaagctggggatgacaaagatgttcttgaagccaaactgaaggaaaagttgggtgatgtcaacattttgcaggaaaaagtaagtttgcttagccaagaaattgataataagggtatacgcatcagggaactcagttcattactttcgtcaaaggaagcagactaccgtaatctgtgctctttctctgaccaaactaaagagagtctagaacttgcagaagctaaaatacagcaactggaggaagaggttcatagaactagaaatgatctttcttctaagatatcttcaattgatttactgaatgaggaacttcaagcactgaactctgcaaagaatgaagctgaggaaaagctaagtgagttaacaaaagattatacagacctgaaggcttcttctgaagcaagagagagccgcaactctgagctactattagaaaaagataatatgatcaaacagcttgatggaaaactctctgatgcattaagtgattctagcaaagaccgtgagaacatcgctgcgctgaacaaggaattggatgcaacaaaagcaatgctagagaatgaagttgctgcagttaaaagtttaagagaatcacttcaatccacagaggaggcactgacagattccagaagtgaggtatccaaactttcagtggaacttgatgaagcaaatagaatgaaccaggacctggtgctgcaaatttctaaactccaggatgagttcaatgaaatgcaagagggccttactaacaaactaggagaggtagaatcagtatctaaagctctgtcagacgaacttgtctctgttaaggagatggttcacaagggacaggaagaacttgaagccacttctaatgagcttgcatccattgtggaagctcgtgacaacctgaagaaagaattgctcgatgtgttcaagaagttggaatccacgtcacaggagcttgttgatgaaaggaaaactgtcactactttgaatagggagcttgaggctttggtgaaacaactacagatggattctgaagcacgaaaagctcttgaagcagacctggatgaagcaacaaagtcactagacgagatgaacaggagtgcattatcactatcaaaggagctagaggaaactaattctaggaaggacactcttgaagcagagaaaaaaatgttatcaaaggctcttgctgagcaacagaagatcacaactgaagctcatgaaaacactgaggatgctcagaatcttatctctaggcttcagactgagaaggagagttttgaaatgagggctagacatcttgaagaggagttggcgttagcaaagggtgagatattgcgcctaagaaggcagattagtacaagcagatcacagaaagcaaaaactcttccaaacacaaatgcatctccagaggtcagtcaggctccagacgagcagcctgtgaatgataatcagaataccagcaaagttgctgctgggtctcaatatactgcaaagaggacgactaggagaagaaaaggtggtgcatcaacgtgaatgtgcttgggagattgataggaaaggaaatcatctgctttcattgcttcctgtttagtcatcaatgataacttcattttttatactgtcttcctttgcaacattattagtattatttctatttgcttatttgttgcagtggaaacttccaattcattagctattcctatattttgagttttggaagttgaggatcagggtcaaatatgtgtacagataattttttgaggttcaacatgacagaaaatatttttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0180300, RefSeq:Os01g0180300