Difference between revisions of "Os01g0275600"

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(Created page with "{{JaponicaGene| GeneName = Os01g0275600| Description = Similar to Argonaute 4 protein| Version = NM_001049257.1 GI:115435927 GeneID:4324438| Length = 7526 bp| Definition ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0275600|
 
GeneName = Os01g0275600|

Revision as of 18:48, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0275600

Description

Similar to Argonaute 4 protein

Version

NM_001049257.1 GI:115435927 GeneID:4324438

Length

7526 bp

Definition

Oryza sativa Japonica Group Os01g0275600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:9630312..9637837

Sequence Coding Region

9630486..9630661,9630754..9630785,9630874..9630968,9631549..9631622,9631712..9631823
,9631947..9632010,9632190..9632255,9632376..9632506,9632864..9633001
,9633095..9633207,9633286..9633451,9633568..9633681,9633771..9633833
,9633933..9634040,9634123..9634239,9634323..9634485,9634626..9634723
,9634832..9634929,9635034..9635170,9635289..9635510,9635605..9635810
,9635903..9636124

Expression

GEO Profiles:Os01g0275600

Genome Context

<gbrowseImage1> name=NC_008394:9630312..9637837 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:9630312..9637837 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagtccaacagtggtgaaatcgaggagttgccacctcccccacctttgccaccaaatgctgagccaattaaaactgatgatacaaaaaagttatcaaaacctaagagggccttgatggctcgctctggttgtggcaaaaaagggcagccgatacagctgctgacgaaccacttcaaggtttcactgaaggcagcagacgaatttttccatcactactatgttaatctgaagtatgaggatgatagaccagtggatggaaagggcataggtagaaaggtgctggacaaactccagcagacctatgcgtctgagctggcaaataaagattttgcatacgatggtgagaagagcctgttcaccattggtgctcttcctcaagtgaacaatgagttcacggtagttctggaagacttcaacactggaaagtcatctgcaaatggtggcagccctggcaatgacagtccaggaaatgacaggaaaagggttagaaggccatatcagacaaaaacttttaaagttgagctgaactttgcagcaaaaattcctatgagcgccattgctcaggccttgagaggccaggaatctgaaaacacccaagaagcaattcgtgttattgatatcatattaagacagcattccgcaaaacagggttgccttttggttcgccaatcctttttccataacaatccttcaaattttgttgacttgggtggtggtgtgatgggctgtaggggattccattcaagcttccgagctacacagagtggactttcactcaatatcgatgtgtccacaacgatgattgtgaaacctggtcctgtggtagattttctacttgccaaccagaaggttgatcacccaaacaaaattgactgggcaaaggccaagcgtgctctgaagaatttaaggataaaaacaagtccagcaaatactgaatacaagattgttggtttgagtgagagaaactgctatgaacaaatgttcactttgaagcaaagaaatggtgatggtgaacctgaaggtgtggaagtatctgtttacgagtactttgtgaagaatcggggcatagagttgagatactctggtgattttccctgtatcaatgtggggaaaccaaaacggccaacttattttccaattgagctctgctctcttgtgcctttgcaaaggtataccaaggctttgagtacactacagaggtcttcgcttgttgagaagtccaggcagaaacctgaagaaaggatgtcagttttgtctgatgtgctgaaacgcagcaactatgattcagagcctatgttgaattcttgtggtatttcaattgctcgaggttttacacaagttgctggcagggtgctgcaggcccccaagctaaaagctggaaatggtgaagatctttttgcacgtaatgggcggtggaactttaataataagaggctcattaaggctagcagtatcgagaaatgggcagttgttaacttctctgcacggtgtaatattagggatcttgtccgagacatcatcaagtgtggtggcatgaaaggaattaaagtagaagatccatttgatgtcattgaggaggacccttcaatgcgacgagctcctgctgcaagaagggtagatggcatgattgacaagatgcaaaaaaagcttcctggacaaccaaagtttctgctctgtgttcttgctgagaggaagaattcagatatttatgggccctggaagcggaaatgtcttgctgaatttgggattattacacaatgtgtggcccctactagggtcaatgatcagtatattacaaatgtactgttaaagataaatgcaaagcttggtggcttgaactccctgcttcaaattgaaacatccccttccattcctcttgtatccaaggtcccgacaataatattgggaatggatgtttcccatggatcacctggacagtctgatataccttcaattgctgcggtcgttagttctcgtgaatggcctcttgtatcaaaatacagggcttcagtccgttctcagtcacctaagttagaaatgattgatggactatttaagccacaaggagctcaggaagatgatggcctcattcgggagttattagttgacttctataccagtactggtaaacgtaagcctgatcaagtcattatcttcagggatggggtcagtgagagccagtttacccaggtgctgaacattgagctggatcaaataattgaggcatgcaagtttcttgacgaaaactggtctccaaagtttacactgattgttgcacagaagaatcatcataccaaattttttgtgcctggatctcaaaataacgttcctcctggtactgttgtggacaacgcagtctgtcatccaaggaacaatgacttctacatgtgtgcgcacgctggaatgattggaactacaaggcctacacattatcatatccttcatgatgagataggcttctctgctgacgatcttcaggagttggtccactccctttcctatgtctaccagaggagcactacagccatatcagtcgttgcacccatttgctacgcgcatctcgctgctgctcaggtcagccagttcatcaagttcgacgagatgtcggagacgtcgtcgagccatggtggccatacctcggcgggcagcgctccggtgcccgagctgcctcgcctgcataacaaagtcaggagctccatgttcttctgctga</cdnaseq>

Protein Sequence

<aaseq>MESNSGEIEELPPPPPLPPNAEPIKTDDTKKLSKPKRALMARSG CGKKGQPIQLLTNHFKVSLKAADEFFHHYYVNLKYEDDRPVDGKGIGRKVLDKLQQTY ASELANKDFAYDGEKSLFTIGALPQVNNEFTVVLEDFNTGKSSANGGSPGNDSPGNDR KRVRRPYQTKTFKVELNFAAKIPMSAIAQALRGQESENTQEAIRVIDIILRQHSAKQG CLLVRQSFFHNNPSNFVDLGGGVMGCRGFHSSFRATQSGLSLNIDVSTTMIVKPGPVV DFLLANQKVDHPNKIDWAKAKRALKNLRIKTSPANTEYKIVGLSERNCYEQMFTLKQR NGDGEPEGVEVSVYEYFVKNRGIELRYSGDFPCINVGKPKRPTYFPIELCSLVPLQRY TKALSTLQRSSLVEKSRQKPEERMSVLSDVLKRSNYDSEPMLNSCGISIARGFTQVAG RVLQAPKLKAGNGEDLFARNGRWNFNNKRLIKASSIEKWAVVNFSARCNIRDLVRDII KCGGMKGIKVEDPFDVIEEDPSMRRAPAARRVDGMIDKMQKKLPGQPKFLLCVLAERK NSDIYGPWKRKCLAEFGIITQCVAPTRVNDQYITNVLLKINAKLGGLNSLLQIETSPS IPLVSKVPTIILGMDVSHGSPGQSDIPSIAAVVSSREWPLVSKYRASVRSQSPKLEMI DGLFKPQGAQEDDGLIRELLVDFYTSTGKRKPDQVIIFRDGVSESQFTQVLNIELDQI IEACKFLDENWSPKFTLIVAQKNHHTKFFVPGSQNNVPPGTVVDNAVCHPRNNDFYMC AHAGMIGTTRPTHYHILHDEIGFSADDLQELVHSLSYVYQRSTTAISVVAPICYAHLA AAQVSQFIKFDEMSETSSSHGGHTSAGSAPVPELPRLHNKVRSSMFFC</aaseq>

Gene Sequence

<dnaseqindica>7177..7352#7053..7084#6870..6964#6216..6289#6015..6126#5828..5891#5583..5648#5332..5462#4837..4974#4631..4743#4387..4552#4157..4270#4005..4067#3798..3905#3599..3715#3353..3515#3115..3212#2909..3006#2668..2804#2328..2549#2028..2233#1714..1935#gtgtggagaggcgaggcgttcgagtttcgagaggagggaggggggacaaggaggaggagcgcaccaccctctcggagaggtcgcctccgttcttgcatcgttttctttggtaaggcgaggagtcccgcttttcattttgggtggagggaaatctagggttcttggcgggggggtttttgcagattggattgttgtgtatgcgggagcggttgggcttgtgttgtttggtgcggttcttggtggtggtggggtttttcggggaggagaggagggcggattccgtggggttttaccgtggaagtttctgttcttttgtgttcttttgcggttttcctctgttcttggtttaaagatcgctgcattttgatgcattctattaaggagtttgatttggggttttctttctttttttcccctgatttcgttcgttcttcgttgcgttgttctcggggctttttcgtcttttgccgtttatggtggtttgttttagatgttttttttgaagatttatccgaaacagtgtttgtgcgattctttttcatttttgcgttctttcttcgtttgatatttctggtccttgttgttttaaacctttattttttttgtttgggagcacctccttttgatgcttgttttggtggatatctgcctgtgtagttttgttagggtttaggggtttttgggaaggtttatgatactgatcttgactgggaaaagaagatttgctgattaagaaaatggctaagtttcttgtacttaaaaatgggtaggttgtgtttgttgtagttttgaaagtctgtaggctggatagactcttctcctatctttttggaagaaaaattaagaaaatagttttctaattttgcttttcttttctttttctggaggaaaaactcttgacccagagcattttcattgtctggtatctgttagcatgggttttagtttcctttccttttctgttttgatttaccttgttaattgttgaatgagttatgtattttgtgtgcaggatagggcagcgctttgacagctttggggagttagtcggtaagtgtactacgctcttaatttggctattaattaatgttttaatctttgtgagttgactaggaattttctatagttgtggtctcactctcagtagttatacatattttttttgcatgtactactagtttctcaggctttcttgttaatgttgcaatcgtctgacaaacgattagtgtctttgaatacattgttaaaaactggagtaccattttaatgtagatggcaaacaagaagcttagttgttttggcaccggttgaccctcgaagtagtagtaacctcaggtcattctcagtatgacagtgtatttaaagtgtactggcaaactcatgtaggtgtgataagagtttggacttgaacggtgacttgaaacgtttgttgtgtgttcttttgtgtgcatatgcaacatggcagactgactgacataacgtttgtgttagcatattactatattatgcttttagttgaatgttttaaaccttgtggtgtcataataattttcttgtattttacgatttcatttgcatgcaaaatatattagtgagacctaggggttttctgtatgattctagttttgaagattgatttaacttgttatattctagtctgagagaagtgtttatttagttggcttttatgctctatttcagagaagtgtgcacatggagtccaacagtggtgaaatcgaggagttgccacctcccccacctttgccaccaaatgctgagccaattaaaactgatgatacaaaaaagttatcaaaacctaagagggccttgatggctcgctctggttgtggcaaaaaagggcagccgatacagctgctgacgaaccacttcaaggtttcactgaaggcagcagacgaatttttccatcactactatgttcgtctctagcccttgtaacagttctttatttttcttctttgagttccttttgttcatgtctgattgccactactgcttgagttacacaggttaatctgaagtatgaggatgatagaccagtggatggaaagggcataggtagaaaggtgctggacaaactccagcagacctatgcgtctgagctggcaaataaagattttgcatacgatggtgagaagagcctgttcaccattggtgctcttcctcaagtgaacaatgagttcacggtagttctggaagacttcaacactggaaagtaattatctatctcaattctttctgctactttcaatgatgccaacattttttacttcaacattttttgctcacataacttccaatgctattaggtcatctgcaaatggtggcagccctggcaatgacagtccaggaaatgacaggaaaagggttagaaggccatatcagacaaaaacttttaaagttgagctgaactttgcagcaaaaattcctatgagcgccattgctcaggccttgagaggccaggaatctgaaaacacccaagaagcaattcgtgttattgatatcatattaagacagcattccgcaaaacagtatgtttccatatcttttggaagcccctactttgcaaatattctagctatattgtttagaatgtttaacatcatggctgatttgcatttgttcttaacttttcctttttttatgcaggggttgccttttggttcgccaatcctttttccataacaatccttcaaattttgttgacttgggtggtggtgtgatgggctgtaggggattccattcaagcttccgagctacacagagtggactttcactcaatatcggtaaacgattgctattatggccccaatttcatattttgtatgtggtcacatgcacgctgtagctgataatacatgtttgcatgttgctgctttaacttgtgcagatgtgtccacaacgatgattgtgaaacctggtcctgtggtagattttctacttgccaaccagaaggttgatcacccaaacaaaattgactgggcaaaggtattatgtcgtcatttcactgagtaaaacaataatttaagaatgaatgacaagaacaatgtgaaccctttgagatgactgaattgtattgttaacacaaatttgtaggccaagcgtgctctgaagaatttaaggataaaaacaagtccagcaaatactgaatacaagattgttggtttgagtgagagaaactgctatgaacaaatgtgagcttgttcatgtgttgtttttcttatattttatattgttgtgtgcctggatatttgacgtttttgcaattgcaactttggttttttatgtactttgagaaatagctttatttacttagctacacataattatctaggttcactttgaagcaaagaaatggtgatggtgaacctgaaggtgtggaagtatctgtttacgagtactttgtgaagaatcggggcatagagttgagatactctggtgattttccctgtatcaatgtggggaaaccaaaacggccaacttattttccaattgaggtaattgttttccttaatccaacataaatattttccaattaacatcctttgctgattgtggtgaatgttcctatgcttgctagctctgctctcttgtgcctttgcaaaggtataccaaggctttgagtacactacagaggtcttcgcttgttgagaagtccaggcagaaacctgaagaaaggatgtcagttttgtctgatgtgagttgctcctctgtcagcttaagagctgatgtacccctttcctgacagaataatcaaatcatcaatggtgaatttgcaggtgctgaaacgcagcaactatgattcagagcctatgttgaattcttgtggtatttcaattgctcgaggttttacacaagttgctggcagggtgctgcaggcccccaaggtcagtcagaactgtctatgctgcgttttttaattaaccctttgctgtgttctcttatttgtatatggtttagatcaattgtatgtttttctttggcagctaaaagctggaaatggtgaagatctttttgcacgtaatgggcggtggaactttaataataaggttagtgtctcagttctactcccactttactctttagacttccatgttgtgatacatattgtaacttctgttatatcttttttttacagaggctcattaaggctagcagtatcgagaaatgggcagttgttaacttctctgcacggtgtaatattagggatcttgtccgagacatcatcaagtgtggtggcatgaaaggaattgtaggtttttctgttttactcaaaatgttgcatatttcatcaaatgcaattccctcactttagtgttgcatgtttcatcaaatgcgattccctcacttaaaagactggctttgcagaaagtagaagatccatttgatgtcattgaggaggacccttcaatgcgacgagctcctgctgcaagaagggtagatggcatgattgacaagatgcaaaaaaagcttcctggacaaccaaagtttctgctctgtgttcttgctgagaggaagaattcagatatttatggtcagttacactaagattgtgctatgcctattcaaatatgcaacccttctatggcattcacatgttcttctctaatagggccctggaagcggaaatgtcttgctgaatttgggattattacacaatgtgtggcccctactagggtcaatgatcagtatattacaaatgtactgttaaagataaatgcaaaggtttgtggattttcacatccttccttctctcgcattgtaccattttatatctggtctggtcagcactaacatttttgcttgtttattaatcagcttggtggcttgaactccctgcttcaaattgaaacatccccttccattcctcttgtatccaaggtcccgacaataatattgggaatggatgtttcccatggatcacctggacagtctgatataccttcaattgctgcggtaagtaaacttttctaattttctgcactgtaccagaaacgaaaagctttactatacttaatcattagagcaagtttgatagtttagagcttagagagctaactacaagttaataagtataaacccatcttggctaatatttataatagattagctataaggttgccttttttctcctctctctcacttgtatatttaatacatctatcttggagcatgtggagaactagctctttcattagagccaacacataatttttctgtgtctttctccacataagcttatagtgggcttatagtccactattattcttgctcttaccggtccttaattcttaatcgttaacctttttttaggtcgttagttctcgtgaatggcctcttgtatcaaaatacagggcttcagtccgttctcagtcacctaagttagaaatgattgatggactatttaagccacaaggagctcaggaagatgatggcctcattcggtaagcaattttatttggaccgtgatgcaatccttataactttgtggcatgttccattgttcattaaattctcccagtgctaatgatatcttctgccatttgtgctggaaattatttcagggagttattagttgacttctataccagtactggtaaacgtaagcctgatcaagtcattatcttcaggtcagttactctttgaaagcttctcgtaaatgccattaataagcttcagtgaaatacctgaatgcaggattgtaaaagcaaaacttaaattatggacaatgattactttgtgctttgacttaactggttctttgtgtaaccgtttaatttttttcacttatttggtgctttaaatatagggatggggtcagtgagagccagtttacccaggtgctgaacattgagctggatcaaataattgaggtattgttcattataactttctgttctattgtttttagttcttttttattttgtatgcaagactgcaagtatcattactatcatcagctgcacaatcacttttgtatccttaaattgttgcaggcatgcaagtttcttgacgaaaactggtctccaaagtttacactgattgttgcacagaagaatcatcataccaaattttttgtgcctggatctcaaaataacgttcctcctggtaatcccattgttcgatatgttgtgtcaaaacttgcaattgtacatccttaatctaatatctaatgatttgaatgatgtaacttttaggtactgttgtggacaacgcagtctgtcatccaaggaacaatgacttctacatgtgtgcgcacgctggaatgattgtaagtatcgtcttggtgtattttatcggggttggctttaattgggtcacgtataatattccactttcaaggtcgattgtttaggcaagtctttcatattaaaattaagttattgatacatggcacttgtaggctgttgctttgttcaatccttgccctgagttttttatccttcaaaagtgatctagattgatacttaccatgatcccatcaggccaagctttgtactctttgtacataaatgtttgtacgtgtcattgatgaattgaatcagtaactattgacggttgatcaggaatgcattgctacagctggtaacctaactaatgtgcaacttctgatttatgttggatgaattaattcatttatcttgggtgctttatgcaacttgttttaattatgctataaaaccatcttggccagctgtagtattattatgtgaatttctttatagcctaatatcagaaatttctatagtttttttttgtgtgtgttctctgtatgaagtttcactccttttgccagtcccttttttttggtcctacttgaattgatggtggttgtgcctgtgctgtattagggaactacaaggcctacacattatcatatccttcatgatgagataggcttctctgctgacgatcttcaggagttggtccactccctttcctatgtgtaagtttgatatatgccatgattccttttttcacttcttggaaacagacttgttctgacatccaaatgcttgtttgtaccctttcagctaccagaggagcactacagccatatcagtcggtaagtgggcaatacctggtttagtgattgatgtttgcttcgaacttgcatgccagtgtttatttattcatctttatcttgtttccttgcagttgcacccatttgctacgcgcatctcgctgctgctcaggtcagccagttcatcaagttcgacgagatgtcggagacgtcgtcgagccatggtggccatacctcggcgggcagcgctccggtgcccgagctgcctcgcctgcataacaaagtcaggagctccatgttcttctgctgagcagccgcttggctgctatgttatggcctgaacttgtggatgttttggtagtcttgtttatgtcgtgtttgtttaagtaccagctggggggtggatgttattaggctggatgccgcacttctgaacctgttaggataactactgaacctgtccatcttaatcgcagcttgttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0275600, RefSeq:Os01g0275600