Difference between revisions of "Os01g0277500"

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(Created page with "{{JaponicaGene| GeneName = Os01g0277500| Description = Similar to Dof3 gene (Fragment)| Version = NM_001049270.1 GI:115435953 GeneID:4324267| Length = 4393 bp| Definition...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0277500|
 
GeneName = Os01g0277500|

Revision as of 18:48, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0277500

Description

Similar to Dof3 gene (Fragment)

Version

NM_001049270.1 GI:115435953 GeneID:4324267

Length

4393 bp

Definition

Oryza sativa Japonica Group Os01g0277500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:9732788..9737180

Sequence Coding Region

9732990..9733094,9735234..9736601

Expression

GEO Profiles:Os01g0277500

Genome Context

<gbrowseImage1> name=NC_008394:9732788..9737180 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:9732788..9737180 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgcgcttaggcagggcgacgaccccgccatcaagctcttcggccgcaccatccccctcctcctcgacccccccgccgccgccgccgccgccgccgacgaggtcatgcctaatttaggaaatggtgtaaaaaccaataatgacttacctttagtctcagacaagcttttgattgtcaaaggtattcctttttgtcccaacaatagtaagaaaaatgatttacaaggcatcagcagaccggatggaagaatagaaatcgattccatgactgaggatgttaagactgagcctgatggatctgtccctgagaagatactcaagaagccagataagattctgccatgtccacgctgcaatagcatggaaacaaagttctgctacttcaacaactacaatgttcaccagcccaggcacttctgcaggaactgccaaagatattggaccgctggtggagctatgaggaatgtcccagttggtgctggaagacgcagaaataagcatgtgtcaaaatactgtcaggcgatgatgacgtgcaataatactgtagctcctggagatgtttctgatgtggttcaccatcaggttattacacatggatcttctctccttccagcaacactgaaggaaaatgaaacacctacagaattcatatcagaagtaccaccatgtaagtcttcagcttcaatccttgatattggagagccgaatgatactgaccttgttcccttggcctctggtgataacaaggaagaaaaatcatgtgcatcttctgtggtagtatccagctgttcagagaatctgatgccagataatgcaattatgaaagagccaaacaacaggtcaggatgttgtaatggtgtggcattgcctttccctactggacctgctttggtgctcccctggagtcttggatggaacagtgttgctctcatgccagctacccagtgctcgatgcagcccgttcttgggttaaaagatgggataccctgcccgccttcatggccaccgcaactgatggtgccggccccaggaatctgtactcctgttgttccaatccctcttgtgccacctctgtggagctgcttccctggctggcctaatggaatgtggaatgcacaatgccctggaggtaatactactgtgctgccgtcaaccgctccaaacaaaatttcttgttcaggaagcagttctctggtgttgggaaagcattcaagagaagaaagcttgcaggaagaagagaagacgagaaattacttatgggtacctaaaactcttaggattgatgatccagctgaggctgcaaagagttcaatctgggcgacccttggcatcaagcctgacgataaaggcatattcaagtctttccagccaaatgttgcgaaaaatggcacggcaccagaatcgcctcaggctctgcaggccaatccagcagcattttcgcgttctcaatcgtttcaagagacgacttga</cdnaseq>

Protein Sequence

<aaseq>MAALRQGDDPAIKLFGRTIPLLLDPPAAAAAAADEVMPNLGNGV KTNNDLPLVSDKLLIVKGIPFCPNNSKKNDLQGISRPDGRIEIDSMTEDVKTEPDGSV PEKILKKPDKILPCPRCNSMETKFCYFNNYNVHQPRHFCRNCQRYWTAGGAMRNVPVG AGRRRNKHVSKYCQAMMTCNNTVAPGDVSDVVHHQVITHGSSLLPATLKENETPTEFI SEVPPCKSSASILDIGEPNDTDLVPLASGDNKEEKSCASSVVVSSCSENLMPDNAIMK EPNNRSGCCNGVALPFPTGPALVLPWSLGWNSVALMPATQCSMQPVLGLKDGIPCPPS WPPQLMVPAPGICTPVVPIPLVPPLWSCFPGWPNGMWNAQCPGGNTTVLPSTAPNKIS CSGSSSLVLGKHSREESLQEEEKTRNYLWVPKTLRIDDPAEAAKSSIWATLGIKPDDK GIFKSFQPNVAKNGTAPESPQALQANPAAFSRSQSFQETT</aaseq>

Gene Sequence

<dnaseqindica>203..307#2447..3814#actactatagtgtcattactccgaacacaacgcgagcggccgcctcctcctccgcccagtgacatgccacccgccgccgccgccgccgctggcatcatccccgctcgtcgccgtcgtcgtgctgcgcccgaggaggaggaggaggagccggtgccggtgccggtgccggtggtggcagcgcggacgagatcggggcgccgctatggccgcgcttaggcagggcgacgaccccgccatcaagctcttcggccgcaccatccccctcctcctcgacccccccgccgccgccgccgccgccgccgacgaggtgagccatcgatttcatccaatgccaatagggaagtagtcggagagaggaatctttatctaactccctccccgctttggacgagatgcgacgcgcctcgctttctctctctctttctctcttttcctggctgctttttggggtatcgatgctttgggtttgctcttctagttcgtgtcggctaattaggagattgagaaatgagtttaaaaaagggattaattctttgccgccatggtgttcgatgcaaattctcaagcacattcttcttgttttttctctctccaaagaattcaaataccgccatggtgttcgatgcacggctctcaatacactttttggcaaatactaaattgacaacttttgcttagatccattttgtaaaaagtactccaaaacagcaaaacttttactacccccgtcccaaaataagtgcagccatgagtttcagcgccctactttgatcatccgtcttattttaaatttttttataattagcaattttgtagttataagatgataaaacataaatactaatttactcgtgaattatgtttttaattcttttcaaaaaattttcaaataagacgagttgttaaagttgggcgcggaaaaccatgactgcacttattttgggacggatggagtactattttggaggaactaaacagggcctaaatatactaatataactagagaaaagaacatttttttttcagttttagctcatttatttgaacaaatagagtgggtcaacggtatattagtgacccatgctaatccccaacctcatatttgttggtaggaaaattctgttctagaaaattctgttctatcctttcttgatttcttggcaacatttggggtaagattctgggagtttgattggcttatcttagctttctttgtgcaaagaaccatctttcgataaccatatgcagaacctagaatagatggtactaagtctgtttgtcctgaaacctgatagactggatagtccgtgcctttgaaccaaattgcttatcaggacttgatttcagtgcacttgcactctagtatgggttaacttttgttgccaaaggtactttttacgtactagtatatgagttattccagcaagcaattctggaaaaaaagaaaaaaaaaacagactctaaatgctaaattggagtctggaaaagtagtgttatactatgtactatgatagtggaactgagccttagttttcaaacagtagttgtacgtacctctgaaaaccgtattggtttgcaatttggtttcaaaacactggagaagggactctgatcagctctctgcaagaaggaactgaaaatgtgtcatatatcgtacatgtcgattgctatttgctacagagcaaatttgccatacatcaaacaattttgcatgtcaaactgactccaaagatgattttactaccagccttaaaaataaaatgcccactcattacttatttacatatgcacattgtattgttgctatgtaacaggtttgatactgagtagctctggtactaacatgtgaagtattgagctatgaaactgaagtaatgttttgctcgaagtgctgctttatgcttaaactcaagtgcgccagaaaacagttgcatagccacacagtgataacttgaaatgttaacatatggtatttttagcaaccccaagtatgaactagagttttacaagtgcaagtgaatactgagtataatagagaaaagatcccaacggggagaaattcttagtaacattaggcaataacttatcgcacaaacatggcgactctgattattcagggataacataaaatgatttatatttaactgaaggacattgaaactgcaacagaacattgtaatggcgatgtatcagttgtgccatcaggtagtttccgtgaccccacatgattcagctgaagctgaagaaagactttcatgaaaatttaggccagtagcacctgcatcattttgaatataacatggcttatatgcctcataataattgaatacttgacactatcacactatcacagttttaacattttgctatacttttagctaaatgatccaaaatctctgcttgatattttattattttcttacctcttatgtataatccatttcaggtcatgcctaatttaggaaatggtgtaaaaaccaataatgacttacctttagtctcagacaagcttttgattgtcaaaggtattcctttttgtcccaacaatagtaagaaaaatgatttacaaggcatcagcagaccggatggaagaatagaaatcgattccatgactgaggatgttaagactgagcctgatggatctgtccctgagaagatactcaagaagccagataagattctgccatgtccacgctgcaatagcatggaaacaaagttctgctacttcaacaactacaatgttcaccagcccaggcacttctgcaggaactgccaaagatattggaccgctggtggagctatgaggaatgtcccagttggtgctggaagacgcagaaataagcatgtgtcaaaatactgtcaggcgatgatgacgtgcaataatactgtagctcctggagatgtttctgatgtggttcaccatcaggttattacacatggatcttctctccttccagcaacactgaaggaaaatgaaacacctacagaattcatatcagaagtaccaccatgtaagtcttcagcttcaatccttgatattggagagccgaatgatactgaccttgttcccttggcctctggtgataacaaggaagaaaaatcatgtgcatcttctgtggtagtatccagctgttcagagaatctgatgccagataatgcaattatgaaagagccaaacaacaggtcaggatgttgtaatggtgtggcattgcctttccctactggacctgctttggtgctcccctggagtcttggatggaacagtgttgctctcatgccagctacccagtgctcgatgcagcccgttcttgggttaaaagatgggataccctgcccgccttcatggccaccgcaactgatggtgccggccccaggaatctgtactcctgttgttccaatccctcttgtgccacctctgtggagctgcttccctggctggcctaatggaatgtggaatgcacaatgccctggaggtaatactactgtgctgccgtcaaccgctccaaacaaaatttcttgttcaggaagcagttctctggtgttgggaaagcattcaagagaagaaagcttgcaggaagaagagaagacgagaaattacttatgggtacctaaaactcttaggattgatgatccagctgaggctgcaaagagttcaatctgggcgacccttggcatcaagcctgacgataaaggcatattcaagtctttccagccaaatgttgcgaaaaatggcacggcaccagaatcgcctcaggctctgcaggccaatccagcagcattttcgcgttctcaatcgtttcaagagacgacttgaggagcttttctgtttgttttctgacataaggatcatactgctacctccacaggaatggtcacaatgtttctatccagtgtgatcttgagctcatatgttgctagagccagatcaaatctagcaactcaaatctggcagagttgccagtgatgaacttggttctgtggtaatgtttatgttgatcaaaaatctctgcttctccccaaggagagaattgtgagcttgtgatccggagctcaaaacatgctccatctgaaatcattagtcaatagctgtcgctgtgatggaggtgaaaaggataactgtgaagtctcttttttcttactttctttgaatttttagactggcattctgacgtttgtatatagcttctcaaaattcatgtaatggcttctatgttaacctgcagaaaatgcataattttgtaactggatggggatcaactccgtttggacataagcaaatcagcctagttatctcatttgcagcattgaaatttaccccaaactaacaccatatctgtcaataccattgggtcaaaatgaacacccatttctaaattatcaaaattcatttacc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0277500, RefSeq:Os01g0277500