Difference between revisions of "Os01g0297700"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os01g0297700| Description = Protein of unknown function DUF6, transmembrane domain containing protein| Version = NM_001049344.1 GI:115436101 Gene...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0297700|
 
GeneName = Os01g0297700|

Revision as of 18:49, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0297700

Description

Protein of unknown function DUF6, transmembrane domain containing protein

Version

NM_001049344.1 GI:115436101 GeneID:4326725

Length

3342 bp

Definition

Oryza sativa Japonica Group Os01g0297700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:10959253..10962594

Sequence Coding Region

10959450..10959625,10960550..10960612,10961369..10961900,10961992..10962357

Expression

GEO Profiles:Os01g0297700

Genome Context

<gbrowseImage1> name=NC_008394:10959253..10962594 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:10959253..10962594 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggagggagagcttgccgacgctggccatggtgatggtgcagctgggcttcgccggcatgaatgtggtgtccaagctggcgctggacaccggcatgagcccctacgtcctcatcgcctaccgcaacatcatcgccgccgtcttcctcgcccccttcgcctactacttcgagaggaagagtggcatggtgatcaccaagaaagtacttgtccagatattcttctcctccatttttggcgcgacgctgaaccaggtgctctacttcgtggggctcaagtccacgacgccgacggtggcgtgcgcgctcagcaacacgctcccggcgctgacgttcgccatggcggcggcgttccggatggagtcggtgcggctgagcgcggccgccgggcaggccaaggtgttcggcacggtggtctgcgtcggcggctccatgatcatgccgttctacaagggcccgctcctcaggctctgggcgtcgcccatccactggcggttcgcggagagcgccgcgtcgggcgcggcggcgccagccgcgggcggcgccgccgtcctcggcgacgtcctcatcatcctcagctgcgccgcgtgggccgtgtggttcatcatacagaccaagatgtcggagcggttctcggcgccgtacacgagcacgaccatcatgtgcttgatggccggtgtgcagtgcgccggcgtcagcgccgccatggacaggagcgtcgccgtgtggaagctcggcttcgacatccgcctctactccgtgctctacatcggcgtggtcgggtcggggatcgcgttcgcgctcatgtcgtggtgcatccaggtgcgcggcccgctgttcgtgtccatgttcagcccgctgatgctggtggtcgtggccattgtcggctgggcgatcctcgacgagaagatacacgtcggcagcgcgatcgggtccgtgctgatcgtcgccgggctgtacatggtgctgtgggggaaggcgagggagatgggctcgccatcggacctcgacggcggcggcggcggcggcggcgtggtggagctgaacggcaagggcgccgacgccgcgacgaccttgccggtgttctgcaccaccaccaacaagcacgagacgacccggaacggctgcagcaactga</cdnaseq>

Protein Sequence

<aaseq>MGRESLPTLAMVMVQLGFAGMNVVSKLALDTGMSPYVLIAYRNI IAAVFLAPFAYYFERKSGMVITKKVLVQIFFSSIFGATLNQVLYFVGLKSTTPTVACA LSNTLPALTFAMAAAFRMESVRLSAAAGQAKVFGTVVCVGGSMIMPFYKGPLLRLWAS PIHWRFAESAASGAAAPAAGGAAVLGDVLIILSCAAWAVWFIIQTKMSERFSAPYTST TIMCLMAGVQCAGVSAAMDRSVAVWKLGFDIRLYSVLYIGVVGSGIAFALMSWCIQVR GPLFVSMFSPLMLVVVAIVGWAILDEKIHVGSAIGSVLIVAGLYMVLWGKAREMGSPS DLDGGGGGGGVVELNGKGADAATTLPVFCTTTNKHETTRNGCSN</aaseq>

Gene Sequence

<dnaseqindica>198..373#1298..1360#2117..2648#2740..3105#gctgcaacctatagctagagagctactgcggcactagtcactctctctctctctctctatagctttgcttgatcatatcaataccaccgccctacaaatctctctctctctctctctcaagaggaattgaactgaagttcttgcagcacggtcgagaagtaagggagttgagagttgagagagtagagaagagggagatggggagggagagcttgccgacgctggccatggtgatggtgcagctgggcttcgccggcatgaatgtggtgtccaagctggcgctggacaccggcatgagcccctacgtcctcatcgcctaccgcaacatcatcgccgccgtcttcctcgcccccttcgcctactacttcgagaggtacacgtacgtacgtatgtctatatcgttacgcatcgtgctgcgctctagctagctacttcctttcgttccctcgacgatcgattccttccttgtgtttcttgttctgattagtgaatattatattcattctttcatggtctttttcttttccctttgaattcattcattcctgcatgtgtggggagtagattcaaagaaatgtttgtttttttttcagatggcaaaataaatgattcttttagtgtcactggcatgttttgactcttgatttgttataccttcatcagaagaaagaaaggaacggactttaattcagtacatctctgagatgtctttttctccttatatcagaaacagggcatgcactcctactgtatttaatgaaaatgacatagtctcatgctgatttcccttcaaaaaaaaaacaggggcaaaaattaatcaatacagggtgttctcaatattcatgtaacaatgctaccagtagtttcctcttgtagaggatgctcttcctgacttcttgtcctgtcgagtttgttttgctctgcgtgattacgaaagcaagtcaaatttttgtttttttgcggctaaccattcaattggcatacttatggcttcgctgtaatttctaaatatatattctccatgtgaatgtactacacctggtgccaactgggattacaacccccaaggagagcttcattaactggacttactaacctcattgaatgtcttaaatgttcatgcactaagcaacatatgaggctgatctcacataaccagctgtatctagctcttgcgtggaatcaatcaatcaatttaataaccaagattttgtttgttggaaatgaattaaccgttttgaatcaagtttgatattagtggttttaatcagtactcaacctacatggatgcatgcaggaagagtggcatggtgatcaccaagaaagtacttgtccagatattcttctcctccatttttgggtaagtactctctccattaaccagttaaacatgtcactgaattaatcgaacttgcagcaatgatctcctgaattaaaggaaaaaaagaagaaaaatgaatcgctagctaggcttgcccatcaaaggagccgatttcttgcaaaactgtctcttttcccctgaagttgagatggccatgtttgtgcactccacatgtgttccttattcttccagggatagggaacatgcttattctgtgtcatgccgttgcctctctaaaaagaacgctaccaatggcgaactgacaaactgaataaactgtactctagttgatcaccacaacccaaccaggccacttaaaaggttgcagccaatgcaaaactgattaattaattagcagtttaactaattgctttttggatgaaaccttcatttgtcccggaattttatttcaatccaacaagttataatctgaatttgcagtttggaaagtgaatacaacttacagtagcaggggtgtgaccctgttctgttctgcctcacctgttctgacactttgccgcgttcaatcttagatcgactagcaaattcaactatatgttgtgatcatgttactagattttacccattttttactatccagtcaaataacggccaaacatatgttgacaagatcaaaacttagcaccaacgcgcacacatttcgaaatgtttatttagaaactaatgtgatttaaataaccgcaacagttaataatttggcatgtacgtgtgcagcgcgacgctgaaccaggtgctctacttcgtggggctcaagtccacgacgccgacggtggcgtgcgcgctcagcaacacgctcccggcgctgacgttcgccatggcggcggcgttccggatggagtcggtgcggctgagcgcggccgccgggcaggccaaggtgttcggcacggtggtctgcgtcggcggctccatgatcatgccgttctacaagggcccgctcctcaggctctgggcgtcgcccatccactggcggttcgcggagagcgccgcgtcgggcgcggcggcgccagccgcgggcggcgccgccgtcctcggcgacgtcctcatcatcctcagctgcgccgcgtgggccgtgtggttcatcatacagaccaagatgtcggagcggttctcggcgccgtacacgagcacgaccatcatgtgcttgatggccggtgtgcagtgcgccggcgtcagcgccgccatggacaggagcgtcgccgtgtggaagctcggcttcgacatccgcctctactccgtgctctacatcgtaagttgcgccgacacgaaaccgatcgatcgaaccgattttcgtttttcttttctgacgcgagagctgttgatgatgatgatggtttcagggcgtggtcgggtcggggatcgcgttcgcgctcatgtcgtggtgcatccaggtgcgcggcccgctgttcgtgtccatgttcagcccgctgatgctggtggtcgtggccattgtcggctgggcgatcctcgacgagaagatacacgtcggcagcgcgatcgggtccgtgctgatcgtcgccgggctgtacatggtgctgtgggggaaggcgagggagatgggctcgccatcggacctcgacggcggcggcggcggcggcggcgtggtggagctgaacggcaagggcgccgacgccgcgacgaccttgccggtgttctgcaccaccaccaacaagcacgagacgacccggaacggctgcagcaactgaagctgatggcgcaccggggcatatggatggcggatcacctgattatatatgcgctagctgcacatttcacaggctgttgcatgtgtgacaactacatcttgctggggatatcaattggtgcggtagtatatagatgtgggagtttgctagtagtagctaggtaaaagttgggggaggtgtgtgagactgtacctgtgccttggttcttgacattaaaaatggattgtgcacttgtgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0297700, RefSeq:Os01g0297700