Difference between revisions of "Os01g0328900"

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(Created page with "{{JaponicaGene| GeneName = Os01g0328900| Description = Galectin, galactose-binding lectin family protein| Version = NM_001049454.1 GI:115436321 GeneID:4326981| Length = 53...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0328900|
 
GeneName = Os01g0328900|

Revision as of 18:50, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0328900

Description

Galectin, galactose-binding lectin family protein

Version

NM_001049454.1 GI:115436321 GeneID:4326981

Length

5371 bp

Definition

Oryza sativa Japonica Group Os01g0328900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:12810028..12815398

Sequence Coding Region

12810265..12810471,12810577..12810684,12810766..12810942,12812111..12812239,12813094..12813369
,12813447..12813696,12814689..12815341

Expression

GEO Profiles:Os01g0328900

Genome Context

<gbrowseImage1> name=NC_008394:12810028..12815398 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:12810028..12815398 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggaagtgcaccggcgtgctgctcatcctgaccctcgccgtcctcctcctcctcctctccccgtcaccctccaccgcgcctccgcccgccgccaccgccgccggcggcccagcggcccgcctcctccccaccctcccgggcctctcccgcctctaccctcccccggccaactccaccgcccaccactcctggcgcctcctccgccccctcctcctccgctccgacgcgctcccgggcaccgccgcgggagtcctcgaggccgccgacgcatggcgcaacctcaccctcgccgtcgcggcatcggcggccggcggcaaggacgggcggcgccagggagacctcgatgtgagctgccggtcgtccgtggaaggggatctgggcggcgtgggcgcccggggcgtcaagatcccgtgcgggctcgcggagggctccgcggtgacggtggtcggggtgcccaagcccggggcggcctggttccgggtggagatggtggggggcggcggcgaggtggtggtctccgtcaatgtgagcttgggagtcgccgagatggtggtggagcagagctcctggacgcgcgaggaggggtggggattgtcggagcggtgtcctccggttggtgatgccgatcgcaatagcagctcactgcttagtctagtggatgggcttgttcgttgcaatcagcaagcgggtgtcagtggccttcaggggaggaacaatacaatggcaaatgttactgcaaacgagcatgaaaatgagaaaaggccaaaaggacgtgcaaattttggtggtagtttttctattattgaaggggagccttttacagcaacattatgggctggtgcagaagggttccatatgacagtaaatggaaggcatgatacgtcatttgcatacagagagaggctggagccatggtctgtagcagaagttaaggtttctggtgatctggagctcctgtcagtcttggctaatggattgccagtttcagaagaggtggacatggctagtgttgagcttatgaaggccccacctctttcaaagaagcgaatttttctgctgattggtgttttctcgactggaaacaacttcaagcgtcggatggctttgaggcgaacatggatgcaatatgaggctgtccgtttaggagaagtagccgtacggttttttactggtcttcataagaatgagcaagttaatatggaaatactgaaagaagctcagatgtatggtgatatccaatttatgccgtttgttgactattataccttgattacactgaagaccattgccatttgcatgtttgggaccaaagttgttcctgcaaagtacatcatgaaaacagatgatgatgcttttgttaggattgatgaagtcatctcaagcctgaagaagagtgaccctcatggacttctgtatggtcttatttctttccagtcttcaccacatagaaacaaggatagcaaatggttcatcagtccaaaggaatggcctgttgaagcatatccaccatgggctcatggccctggatatatagtctcaagggacattgcaaagtttattgttcatggtcatcaagaacgaactcttcagttattcaaacttgaagatgtggcaatgggtatctggatacaacagtacaaaaacagtggccagaaagtaaattatgtgaatgatgaccgcttctatagcgaaggatgtgactccgattatgtgcttgcccactatcagagcccgaggcttatgatgtgtttgtgggagaagcttcaaaaggagtatcagccggtatgttgtgaatag</cdnaseq>

Protein Sequence

<aaseq>MRKCTGVLLILTLAVLLLLLSPSPSTAPPPAATAAGGPAARLLP TLPGLSRLYPPPANSTAHHSWRLLRPLLLRSDALPGTAAGVLEAADAWRNLTLAVAAS AAGGKDGRRQGDLDVSCRSSVEGDLGGVGARGVKIPCGLAEGSAVTVVGVPKPGAAWF RVEMVGGGGEVVVSVNVSLGVAEMVVEQSSWTREEGWGLSERCPPVGDADRNSSSLLS LVDGLVRCNQQAGVSGLQGRNNTMANVTANEHENEKRPKGRANFGGSFSIIEGEPFTA TLWAGAEGFHMTVNGRHDTSFAYRERLEPWSVAEVKVSGDLELLSVLANGLPVSEEVD MASVELMKAPPLSKKRIFLLIGVFSTGNNFKRRMALRRTWMQYEAVRLGEVAVRFFTG LHKNEQVNMEILKEAQMYGDIQFMPFVDYYTLITLKTIAICMFGTKVVPAKYIMKTDD DAFVRIDEVISSLKKSDPHGLLYGLISFQSSPHRNKDSKWFISPKEWPVEAYPPWAHG PGYIVSRDIAKFIVHGHQERTLQLFKLEDVAMGIWIQQYKNSGQKVNYVNDDRFYSEG CDSDYVLAHYQSPRLMMCLWEKLQKEYQPVCCE</aaseq>

Gene Sequence

<dnaseqindica>4928..5134#4715..4822#4457..4633#3160..3288#2030..2305#1703..1952#58..710#gcccatttgtccgaagagctcctccggcgagtccccaacaaccagtgctcgccgccgatgaggaagtgcaccggcgtgctgctcatcctgaccctcgccgtcctcctcctcctcctctccccgtcaccctccaccgcgcctccgcccgccgccaccgccgccggcggcccagcggcccgcctcctccccaccctcccgggcctctcccgcctctaccctcccccggccaactccaccgcccaccactcctggcgcctcctccgccccctcctcctccgctccgacgcgctcccgggcaccgccgcgggagtcctcgaggccgccgacgcatggcgcaacctcaccctcgccgtcgcggcatcggcggccggcggcaaggacgggcggcgccagggagacctcgatgtgagctgccggtcgtccgtggaaggggatctgggcggcgtgggcgcccggggcgtcaagatcccgtgcgggctcgcggagggctccgcggtgacggtggtcggggtgcccaagcccggggcggcctggttccgggtggagatggtggggggcggcggcgaggtggtggtctccgtcaatgtgagcttgggagtcgccgagatggtggtggagcagagctcctggacgcgcgaggaggggtggggattgtcggagcggtgtcctccggttggtgatgccgatcgcaatagcagctcactgcttaggtgaacttcttgcaagcttttgcagtttcctttggatttattcctcttaaagtttttagctcaggttgttgttcatatctgtgattaattgaacttgtgtatggaagctagcaatgcagaaatttcttgatgattacagtgtggatgctccactttagaagtttaggtacacacaaagtacataggcaagctagcaaatgactggccagcatcagcgtgttgttagatgcctcacatattgttgtggaatgttgcatgtttattatgaccagcttatagtggaggtagctgcctggtgactggtcagccagccagtcacgatatcccaccgcactcctgtagaaatcctagaaaaccgagtgataactctaaatttgagtactatggttttatttagcttatttagttgattaaatacttctattatttgttaataatcaatattgaagactaatgattttatgtggtttatatttcaacagaaaattgatattatgtttcttatttgggttttagctatttatgggggattgtgtgacttttcagtatttctttattatttggtctatctgttgagaaaaaatgtttgccgcaaactaaaaaacactaaatatacatcttttattttttttccattctatacctgtttatagcacttatagtagtgcacgtttgctcttgccttaaaccaactatctgcttcaagaatcagaaactcttctaaacaaggaatacttaagcaaacaacagaaatatttgcacttggaattttaatgtgctagttcagtaatcgtaatagtgtaattctgtgatatttagctggtgattactgaaaggtgcagcaagcatatcatgatattattttccatgtctatttctttaaatagtacatatttgtttacggtattttaattatgaaatatctttcttttcctttatagcttcttttggtaatgacaaaagaatattccttttgctgtgagtttgatcagtctagtggatgggcttgttcgttgcaatcagcaagcgggtgtcagtggccttcaggggaggaacaatacaatggcaaatgttactgcaaacgagcatgaaaatgagaaaaggccaaaaggacgtgcaaattttggtggtagtttttctattattgaaggggagccttttacagcaacattatgggctggtgcagaagggttccatatgacagtaaatggaaggcatgatacgtcatttgcatacagagaggtgaggttgtctaaaatgacaaaactacattttctaagtgtatcgcatgattgtgaaacctgttaagtttttgatagaggctggagccatggtctgtagcagaagttaaggtttctggtgatctggagctcctgtcagtcttggctaatggattgccagtttcagaagaggtggacatggctagtgttgagcttatgaaggccccacctctttcaaagaagcgaatttttctgctgattggtgttttctcgactggaaacaacttcaagcgtcggatggctttgaggcgaacatggatgcaatatgaggctgtccgtttaggagaagtagccgtacggttttttactggtcttgtaagtttgctctattcaccatgtgtataattactacattcttacttctttctgttgcactgttttcctgttcaattacctgttttgattgattgaaaagtatacaccttattaaggactagttagtttctacagccatgcattttgatactaggattgcaacttaatttcttagtaagaaccgattaccattagaagaaaaagattaaatgaaggctgagagggataggataaattggctattcacattccgttgtatatcctgaataggctcgtacagcctttacagctccagtgcaacttggtcagctattacaacggaaattcagaatgcctaaagaaaaccaaatgtgcaaagctgaacattatggctgctgtttttccttggttcttccttgattcgtgacagttacaaagctttaatttgtacagatgtaacatgccattcctataatgaatatcctatcaatgataaattgaaggaacagttctcttgagtttcattttcattcatcagtaacatgcttctgtctgattttatactttagtatgtcagtccttttgtttgcattacaaatgctcatacatagttcgagcattctctcttagttgtataccatataatcagatattatccttataacattcttgtataagtctgacattgtagtaattgattcaaccttactagattggatgatcatagttagtgcattactgcccttaaaataagacccttctttcctacatatagtctgacctttttatcaaatgtgctttccataagaaattgttttgtatgtgaattgctgtcccactctgtcacatcataatattttatcccaaaaatgcagcataagaatgagcaagttaatatggaaatactgaaagaagctcagatgtatggtgatatccaatttatgccgtttgttgactattataccttgattacactgaagaccattgccatttgcatgtttggggtatgtatcctctttcagttttcagcttataagaacttattctgcctctctgctatgtggaccatcgtaactagatagtcatgattttgttgataaaaagtatttgaagatatcttggaatcatgtgcaaggtcttatattccttttattgtttagattaaaaacaatgcttggccctttgtttatcactctgagaaatgcaaggccacatgtatatagatgttcatgcacaatattatccatctaaaatgctctgatatttgtgcaagaaaattattagaagatgtgaatctatcatttgctttggaagtttgactcgaggacgaatgaccagtggttttacttgtgtttgccaaattatgttcaaaattctagagccttaatctgagtggaaaatgcaatattagtatgtcacatctctgctctatcagatgcaggaataagctctatcagatgcaggaataaatctgagtgaaaaatagtgacggattgttttctctgtgcagatttacttgttatattttttgacagttttggtacccattgtgcgttgtattcatacctatccatttcatcgattccatgactcagcatgatacattgttttttatcccactgaacaagtacaataacctagcatggtcgcatgcccaaataatgtgatgttggaaatgtagcacagagtaccgtgcactggcttataaattacacaaacccagttgaatgcttatttgctcctggcggatattaatccttttgaaactgttgacctgttgcctctgtggctctgatgtcaacatataggatgaaggatggtagtgtttttttttttttggcaaactatgctatttctactttctagtatacaaatagtgtggcataactatgtagcttttagcactatcagaaggaacatttgaattgtttttttttctcatcacatcttttgacagaacatcaaactgaagaggttgaggcacagggcatttctgcattgttactttgttgggacaagatagaactttgccatgatttgcttgtcacacatgattcgtacattaagtaatccatacaccttcatggatgtagcacctcacaaatccctaatatgagctatagcaaatgtatgcgcatcctaaacttatatttgccttttgccaatctgcagaccaaagttgttcctgcaaagtacatcatgaaaacagatgatgatgcttttgttaggattgatgaagtcatctcaagcctgaagaagagtgaccctcatggacttctgtatggtcttatttctttccagtcttcaccacatagaaacaaggatagcaaatggttcatcagtccaaaggtactgtctattgcagttatcctgtaccaagatttatttatttaggcagctcttctgacatatcacatatgagaaatgcaggaatggcctgttgaagcatatccaccatgggctcatggccctggatatatagtctcaagggacattgcaaagtttattgttcatggtcatcaagaacgaactcttcaggtaacaacactttctaacgatacaaatggacttctttttttaaaaaaaagagattgtcagccatgcagctcttaatctgctgcttcatgtttctaattgcatcagttattcaaacttgaagatgtggcaatgggtatctggatacaacagtacaaaaacagtggccagaaagtaaattatgtgaatgatgaccgcttctatagcgaaggatgtgactccgattatgtgcttgcccactatcagagcccgaggcttatgatgtgtttgtgggagaagcttcaaaaggagtatcagccggtatgttgtgaatagtttctgcatcagcgccaacaatagcgacaggtagtgaagtctcaagttgtggtaggctagttttcttgttgttgtacaatgtattgccacgattgttttgttcgatggcaagtttgttggggatcaataggtttggttttgtagaggaaaatattgatccatgtatacgaaattacgagctggaagacaaaaaaatgttttacaatggatctccaactgttctggatgattccattc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0328900, RefSeq:Os01g0328900