Difference between revisions of "Os01g0337900"

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(Created page with "{{JaponicaGene| GeneName = Os01g0337900| Description = Similar to Dihydrolipoamide dehydrogenase| Version = NM_001049476.1 GI:115436365 GeneID:4326849| Length = 9395 bp| ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0337900|
 
GeneName = Os01g0337900|

Revision as of 18:50, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0337900

Description

Similar to Dihydrolipoamide dehydrogenase

Version

NM_001049476.1 GI:115436365 GeneID:4326849

Length

9395 bp

Definition

Oryza sativa Japonica Group Os01g0337900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:13415273..13424667

Sequence Coding Region

13415447..13415734,13418163..13418309,13418578..13418712,13419124..13419241,13420705..13420829
,13421187..13421312,13421397..13421477,13421968..13422030,13422108..13422182
,13423219..13423297,13423407..13423507,13423732..13423845,13424005..13424118
,13424186..13424257,13424341..13424388

Expression

GEO Profiles:Os01g0337900

Genome Context

<gbrowseImage1> name=NC_008394:13415273..13424667 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:13415273..13424667 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtactccacggctatctcgctctccgccgccgccaccgccgccgcggcggtcggcggcgcccggccaggcgcgatccggccggcggagctccgcttctgcggcctccgccgcgaggccctcgggctccgctcgctgcgggccccgccgcgagcggccgccacgccgcggaaggcggcggcggctactgggaatggtgcggccgggagcggcgggttcgactacgacctcgtgatcattggggcgggcgtcggcgggcacggcgcagctctccacgccgtcgagaagggtctgaaaactgccataattgagggggatgttgtaggtgggacttgtgtgaacagaggttgtgttccgtcgaaggcacttcttgctgtcagcggtcggatgagggaacttcaagatgaacaccacatgaaatcgttgggtctacaggtttcaacagctggatatgataggcaggctgttgcagatcatgcaaataatctggcctctaaaattcgtagcaacttgactaattcgatgaaagctttgggtgtggatatattgactggttttggcaccattgtgggaaaacaaaaagtgagatatggaaaagttggttttcctgacaatgaaatcactgccagaaatatcattattgcaacggggtctgttccttttgtccccaatggcatcgaaatagatggtaaaaccgtatttactagtgatcatgcactaaaacttgagtcagttcctgactggattgctatcgtgggaagcggttacattggactggaattcagtgatgtatacacggctctgggaagtgaggttacttttgttgaagcacttgatcagttgatgcctggttttgatcctgagattgcaaaattggcccaaaggattcttatcaatcctcgtaaaattgactatcatactggggtctttgcgagcaagattaccccagcaaaggatggtaaacccgtgttgattgagttaattgatgctaagacaaaggaacacaaggaaacacttgaggtggatgcagctctcatagctaccggaagggcaccgttcaccaaagggcttggcttggaaaatgtcaacgttgttacacaacgcggttttgttcctgttgatgagcggatgcaagttatggacgcagatggcaatgcggttccaaatttgtattgtattggagatgccaatggcaaactcatgctggctcatgctgccagtgcacaaggaatctcagttgttgagcgaatctctgggaaagacaacatcctaaatcatctaagcatcccggctgcctgtttcactcatccggagattagtatggttgggctaacagagccacaagcgagagaaaaggctgataaggaaggatttgagataagtgttgttaagaccagcttcaaggcaaacacgaaggctctggctgagaatgaaggagatggacttgctaagatgatttaccggcctgacactggagaaattcttggagttcacatattaggtttgcatgctgctgacctcatccacgaggcatcaaacgccattgccctcggaactcgtgtacaagacatcaagtttgctgttcatgcacacccaactttgtctgaggttctggatgagctcttcaaagctgccaaggttaatgcaggtgttcctcattccgtaaatgagcccgtcgcagcctag</cdnaseq>

Protein Sequence

<aaseq>MYSTAISLSAAATAAAAVGGARPGAIRPAELRFCGLRREALGLR SLRAPPRAAATPRKAAAATGNGAAGSGGFDYDLVIIGAGVGGHGAALHAVEKGLKTAI IEGDVVGGTCVNRGCVPSKALLAVSGRMRELQDEHHMKSLGLQVSTAGYDRQAVADHA NNLASKIRSNLTNSMKALGVDILTGFGTIVGKQKVRYGKVGFPDNEITARNIIIATGS VPFVPNGIEIDGKTVFTSDHALKLESVPDWIAIVGSGYIGLEFSDVYTALGSEVTFVE ALDQLMPGFDPEIAKLAQRILINPRKIDYHTGVFASKITPAKDGKPVLIELIDAKTKE HKETLEVDAALIATGRAPFTKGLGLENVNVVTQRGFVPVDERMQVMDADGNAVPNLYC IGDANGKLMLAHAASAQGISVVERISGKDNILNHLSIPAACFTHPEISMVGLTEPQAR EKADKEGFEISVVKTSFKANTKALAENEGDGLAKMIYRPDTGEILGVHILGLHAADLI HEASNAIALGTRVQDIKFAVHAHPTLSEVLDELFKAAKVNAGVPHSVNEPVAA</aaseq>

Gene Sequence

<dnaseqindica>175..462#2891..3037#3306..3440#3852..3969#5433..5557#5915..6040#6125..6205#6696..6758#6836..6910#7947..8025#8135..8235#8460..8573#8733..8846#8914..8985#9069..9116#actctccctcggcaacttcgaatcctccgccccgtcgtctccaaaacccaacacccacacgccctcaacgcctcctcctccgcctccctcccctcaaccctcaacttgaccccgcctagcaactgccaccctgtacaccaccagcgtcgccccccacgcgctcacctcgccgccatgtactccacggctatctcgctctccgccgccgccaccgccgccgcggcggtcggcggcgcccggccaggcgcgatccggccggcggagctccgcttctgcggcctccgccgcgaggccctcgggctccgctcgctgcgggccccgccgcgagcggccgccacgccgcggaaggcggcggcggctactgggaatggtgcggccgggagcggcgggttcgactacgacctcgtgatcattggggcgggcgtcggcgggcacggcgcagctctccacgccgtcgagaaggtatgcttcgcacccctcccgagctgctagatttgctcggggtttgtgtgtttatggtggatgcatttcgtcgtgccatcatggtactatgctagtcgtgatctacagttcctatcaaatgtgaactgaggaatgttggtgccgtcgccgaagctcgaaatttgtttggattggaggagggtttctctatataggacaagcaatgataaaccgtaggccttttattgctatccatgcataataaacccggtgattggttttggataaggaagaagctgcaggtctgctgtgcctataatttgagaagacataccgtgcatcttatttttttcctgccggggaactcgaaactagagtctagcatgttgagaaaaagtgtgatccggttgctaattttaggacatactactataattagattgtcctaagaaactatttcctgatgtggtactttaaaacttctaatagcaatgctgtagtaactagtaatggaagttcaatgttgtagcatggatttccctttaaaaatgtcatagcatgaaaatgatacccggaaaaaggaaaccagaaacataaaattgcaacaagtgtgcgtggtgctaaaaattgtcaaatgttatggtttcgtttcaaggcatatgaaatgtggttgacagcattttgcattttacgcggcttagtgcaacatgttaagtggatttattcactagtgtgctaaaatacctgtctcgagatgtttaggaattgaatataattttgattgactacatctacggatctacctaatgtaggtggtaaaatttgaggattttctggtagttccatactagaaattctagcattattggggctattggcgtgctgaattctttgggtcaattgcatatttgccactggattgaacaggtattgtggatctagcactaaaaaacctgtaatttcaaatttgccatcaaaaacagtttgaacccaacataactgccactgaactaacagcttagactaacaccgttagatggctggttttcatgaaaattaggacaaggatgcccttgtcattgtttgaggcaaaagcaagaacatagtcaaaatgatgaagaacaagcaagagcaatattcgatagaatttttgacattgtttcccttaacatatatcctttgacccaaaaacgatgcggtgaaataagactcaaccctaataatggctgtcaagaagcctcggccattcctacgggataagcaaaaaaaaaagagaaatattctagtagatcgaagcagcctgaagcagccgacgctgcagccctcggcagtcaacgccgacaccttccgcagcccgttgcagtcgtcgccccaagccgccgcaagcgccgcaatcgacgttaactcctgccgcagccgcacgccgcagcctgacgttgcccgacggagccgctcgctgcagccgtcgcccccaagccgctacttgccttgctgccctactcaccaaaatctatctgcacctcttccattggcatctgctactccaaagcgaccgatttttggttgatttgctcctaatttgaatgaagggataagaggattgggcttgtagggttcgtcgtgggagaggataggagaggagttcgagcggatgtttctgatgcggtagagttggggaacaaagcggataaggtcgaatctggcaagggcaacatggtcttatcatgttgccatgttttttaatttaatttcatgaattatttttatcctcccactcgtacaaattggaacggcaatggcatacggaatctgcgcacactgtttttagtggtaaatttgcaattcatgattttataatgactatttcgagttagggggtaaaagtagtggcaaatatgcaattctcccgaattcttttgatatatactgctcacaaggtggtgaagattgattatgtttttcatggattctaaattggcatatcttgatgattactcatcagtttttcttattttccttgaatataagtaagacctattcgatatttcattgtttatctccattttctgttagttaaccatgatgaatgataaccttggttatataattcagaattatgcatattgttaccatagtcaagcattccacttttatatttcaggaatgtgtattgctttgctagttttgatggctgcagtattagtgctgagttagtctgtaatgttccaataaatgctacagatacctatgatgccagtggatacctttgactcaatcaattccttgctagagttctgcaatctattctttgagtaaattgatgatggatccatgaaacggtgcaaattcccatattttggatactgagctttttctggactgcaaacaattgaactattgaagatttcaggaagcattgtaatgaatatgtgaaaatgtactcatgcagggtctgaaaactgccataattgagggggatgttgtaggtgggacttgtgtgaacagaggttgtgttccgtcgaaggcacttcttgctgtcagcggtcggatgagggaacttcaagatgaacaccacatgaaatcgttgggtctacaggtgatatattaatcagaagatttctgtggattagttgatgtactgaaaatagttcagtctgtcatcatggcaatttagtgtaatatttagaaaattaatattgagctcatctaactctatgcaaataactttctttctcttggctcttccaaaaatagtcaagatgccaatatcaaaccaagaacctccttttgttcatggacctttaactataagcatgttttttatggcccctaactttgctaatcatttatcatatttgtaacaggtttcaacagctggatatgataggcaggctgttgcagatcatgcaaataatctggcctctaaaattcgtagcaacttgactaattcgatgaaagctttgggtgtggatatattgactggttttggcaccattgtggtaggtcatctatatctcccttgtttgtcatgaaagcagacaatttattattatgggtgttgcatatgttgcaagagtgagcattgacatattttattttgtatataaacatcacttcttgcaattcttagtggccaagatcattcttgattgaattacatgaatttaccctgtgacataaaagtaggtccctccctaattgtcaaaggactcttaacaccattatgactaaagttacttaagaagggctcagacgtaggagttgtcaattcttttatagttatattattcattaaaaagactgttgttagagtaaatgtatgtgatgtactgtaaggagtgctaaccgtattgtgcattgtaagcatttgagttacagcaattaaaatgtggccattctgatgtgtgcagggaaaacaaaaagtgagatatggaaaagttggttttcctgacaatgaaatcactgccagaaatatcattattgcaacggggtctgttccttttgtccccaatggcatcgaaatagatggtaattactgtttctctttgcaactttgtatcttcaacgtagttaacctactgaagtaaaaaagaatgatttacaataggaactatcatcaaggcatgcctgagataatttccgttccatattcacctaagattagtgtaggtagggctccaatagtcacaaccccttatctgaggatcccaccctgcttgataagttcttcatcaaagtggtcacaatcacttaaacctatatggtcttacatatgttgtactgcatcctgttatatggtattagtctgccggcaaggagtgttcactgctagtacctatttacatcatcttctttgtttttcaattaatcaaccaagaacgttgggaataactgaataactacatgagaaacctgaataactacatgagaaatctgtttcccttctactgttgttgctataggttgagatttgacactgtaactatggtgattgagcatatagccatatacgcacaagtgctcataattgctctgaaattgcaatgctccacgtggatattgtgtattgcagctacagtatatttgtggttacatcttggttttcttctttctacgaactacactaatagaaaagggattattttaaaattgggccactaagatagatgatacaaagcacctttcaattggagggctgaaaattaaaattagatcattaccctataatcacttgtaccaaaggttttctcccatccttaggcagtaaaaaaatttaaccagttgaagtaggcagtaaaaaaatttaaccagttgaagtactaattataacaaaagtgtacgatcgacaatgacaaagactttgctggtacttgggaggtacaaaaatgtatatacctcatagtgttagtaaggaggtagttacctaaacctcttgaagatggaagaaaattcaagaataaatacaaagatggattcccaattctactctatttgtgacattagtttcggtacctcccttcatggagaggtatctcttaagtgatgaggaagtatatacctctccaaggataagagaaaacctcaatatgcaattaatgtagggaccctccattactagaatttgaggtgttaatgatgggtagcaatttttggtcatctataataattcttgacatgattccaccatggagtacataatttcttgcgccactacatcgcaattttttaatgggtgtcacatcttctggtactcctgtaatcttttagcattttcagttcatacactataggagcaaactacttaacatacaaagagatacaaatgaattttttttttgagaccagagatacaaatgaattaaccatgaaaattatatgatccacgtctatagctcctttctaataccatttacatatattattcaggaaaatatgtgttgcatatgcacattcactagttcttacagagctcgctgaatggttttatgcaggtaaaaccgtatttactagtgatcatgcactaaaacttgagtcagttcctgactggattgctatcgtgggaagcggttacattggactggaattcagtgatgtatacacggctctgggaagtgaggtacatgaacagttcctaagatgcatcattttctaacacatgcatagaaacagacatgttttgggtgcatacatgttctgcaagtgtcttttcttggcttaattatgaaataggcatgtttgcatgcaatgttgtaatacacgttaaacagatgaataatactctacttctatgttaacaatgacttaaaactagcgattacacatttatattcttcatacatatatgatataattgtgaagtgcgaacactaattgcatgttaaattctaattaaccatctatgctgttttatgattaaggcctgttgtcatctgatgatatttcacctgtatttacctaaatttcacttggacaggttacttttgttgaagcacttgatcagttgatgcctggttttgatcctgagattgcaaaattggcccaaaggattcttatcaatcctcgtaaaattgactatcatactggggtctttgcgagcaaggttaccttgagattcaactcaagctttctccataatatgaaatcttttgacactattgtaaccttgcaacatccatatctctagattaccccagcaaaggatggtaaacccgtgttgattgagttaattgatgctaagacaaaggaacacaaggaaacacttgaggtaatatattggataatcttgtttttactgtaggctttgtgctcttcttgttaaaagattgttaagacatgcattttcagggtaggatttaaaagctttgactatttgtactagtctgttgtcttgagctgaatgaagtcagtctcatgtgtattcgacaaaagaaagctgaatgaagtccgcgaactattgaaaagttgctgtccacactgttatcaaatgcatcattgttagcctgccagtgtagatcaaactgttataccagaatcgctggtgatgaattgttaaacttgtagtcaaaaatattttctgatatttctgtgacttcatgagcaatctttacgagtgtcatattttgagaattacagtcaatgcaagcatttttaaagtcatttcttcagtatctcgttgcaatcattatctagctcatgggtgctattttattacatgactcaatttcatttgaaaaggtgggattttgtgtttgcaggtggatgcagctctcatagctaccggaagggcaccgttcaccaaagggcttggcttggaaaatgtgagcacacgaaatatttgcttctgtaattatatgaaaattgttatagttacatataaaataccattgattctcaggtcaacgttgttacacaacgcggttttgttcctgttgatgagcggatgcaagttatggacgcagatggcaatgcggtacgttaagttgcatactacctacaatacattctttgttgcttgccattttagacattggcacaactaccaatgcacacctttggctaataatcttcctaatatgtgttaatagaaattactaaaacatcaaatgatatatgcaattctttgatgactattgatgttatttccatgtgacaagccataataattgtgcatacacggactctaatgagatccatttgattacacaaggactgtaatacaccatattactgttttattccttggtaattaatactagtgtattaagtcactcatttgtgcgactatagccatcatgttatggatggtgtggaagaaaatatattaacgataatatgaaattaaataattagttattcaaaacgtatgaaacatgtgaatttgtttgaaacctaattagttgatataaattaaattaatcacatggatatacacacttgtatagatacacaatgttgagtgttcttagggttaggaatactcatatttaattaaatctgtagaatttagagtaccatgtttacacattttactttgtgattatctgaatttgaaggcgtatttgtaatataaatataagcaaataatcgatttatacattatacaatttattatatgactaagtgtaaaaatagaatcgcatctcctctctacactaagctccatgcgtccacctgtaatcactttgtctccttatatacactgtgctttgattagagtaagcaattatatctctatttgtaaattgtaatacctttctatcatctcaagcttgtagttcttcttgcctgctagaagggtctggaacaccctatattttttactacttgagtttcatcctatggtcaaaaattggttctagcttttttgttatttagtgaatccgatggctaatattcattggatgatgtggcacattctagttgcatgttgggtttcacttttcattagttaagatatctttggatcatcatcacttcctttgatatgaacatatattactatgcaggttccaaatttgtattgtattggagatgccaatggcaaactcatgctggctcatgctgccagtgcacaaggaatctcaggtagatacagaataatttgttcactgttttattgtacttcagcgcatatttcgggttttgctttgaactagtgtagttctttgataactaatttcttgtctgaatatagttgttgagcgaatctctgggaaagacaacatcctaaatcatctaagcatcccggctgcctgtttcactcatccggagattagtatggttgggctaacagaggtaagtcaaaattactactcccatctaagagtcttaagtcttaaccccttctgctcaacataggggtaactagatcaataaatatgaaatgagcatgcaaccttttgaaagggataaatgtattgtattttatccatgctaaagcaactcttcatctactgtgctttaggacagtaaccacattcttaataattcgtaaattaagttcctagtaaaatttacagccacaagcgagagaaaaggctgataaggaaggatttgagataagtgttgttaagaccagcttcaaggcaaacacgaaggctctggctgagaatgaaggagatggacttgctaaggtgattctacttttccaccttattgtattctagacctaaactgtttcttataatcacattggatccttgcaatgaatactgtagtcagactaatgctaaagaggaaatctatccttggaacttgaaaatgatgagacatgaactctacttttgctacagatgatttaccggcctgacactggagaaattcttggagttcacatattaggtttgcatgctgctgacctcatccacgaggcatcaaacgccattgccctcggaactcgtgtacaagtaagtgacgagcattttattgtttatgaatggattgcatttgctcaacgctgtttacatcccccaggacatcaagtttgctgttcatgcacacccaactttgtctgaggttctggatgagctcttcaaagctgccaaggtatatacattatttgtcattgttgttttgtaattatttgcaccaataatatagtcaactgtacgtgatatgcctcttttcaggttaatgcaggtgttcctcattccgtaaatgagcccgtcgcagcctagagaggaacatcatctgggatagcccccctcttggatgtccttgattcctagttactggcaagtgtaattcggtaattcctgatgagatccaccagttagtgctgagatatctaattactgcggaaaaagagaggaactactgatgagatccaccagttagtgctgagatatctagttaccgcggaaaagagaggaactactgcgtcgttctatgtatgatgtatcacatatacataacagttttgcagcttatgtagagttcatccgtacagtgctttc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0337900, RefSeq:Os01g0337900