Difference between revisions of "Os01g0342700"
(Created page with "{{JaponicaGene|
GeneName = Os01g0342700|
Description = Similar to PDR-like ABC transporter (PDR4 ABC transporter)|
Version = NM_001049490.1 GI:115436393 GeneID:4326812|
Le...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os01g0342700| | GeneName = Os01g0342700| | ||
Revision as of 18:50, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os01g0342700 |
|---|---|
| Description |
Similar to PDR-like ABC transporter (PDR4 ABC transporter) |
| Version |
NM_001049490.1 GI:115436393 GeneID:4326812 |
| Length |
10937 bp |
| Definition |
Oryza sativa Japonica Group Os01g0342700, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:13660177..13671113 |
| Sequence Coding Region |
13660193..13660548,13662302..13662422,13664189..13664277,13664392..13664476,13664632..13664791 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:13660177..13671113 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:13660177..13671113 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcgagagagatccacaagatcgcgagcctgaggcgggagagctcgctgtggaggcggggcgacgacggcgtgtatttctcgcggtcgtcgacgggggcgtcgtcgtcgaggttcagggatgaggaggacgacgaggaggcgctgcggtgggcggcgctggagcggctgccgacgcgggaccgggtgcggcggggcatcctgctgcaggcggcggaggggaacggcgagaaggtggaggtggacgtcggcaggatgggcgcccgcgagagccgcgcgctcatcgcccgcctcatccgcgccgccgacgacgaccacgccctcttcctgctcaagctcaaggaccgcatggacagagtggggatagattatccaactattgaggtacggtttgaaaaactagaggtggaggcagaggtgcacgttggcaacaggggcctgcccacgctcctcaactccatcatcaacacagtgcaggcgatcgggaacgcgctccacatctcccccaccaggaagcagccgatgaccgtcctccatgacgtcagcggaataatcaagccccgaaggatgacattacttctaggacctcctgggtcaggcaagacaacgttgctcctggcattggctgggaagcttgaagacaatctcaaggtttctgggaaggttacctacaatggccatgggatggatgagtttgtgcctcaaaggacagctgcttacatcagccagcatgatctccacattggagagatgacagtgagggagaccttggccttctcggcacggtgccaaggtgttggatctcgatatgacatgcttacagagttgtcaaggagggaaaaagcagagaacatcaagccagatcaagatattgatgtctatatgaaggcctcagctattggaggacaagagtccagcgttgtcactgaatacatattgaagattttaggattagacatttgtgcagacacagtggtagggaatgatatgttaaggggtgtatctggtggacaacggaagcgtgtgactacaggtgagatgcttgttggtccagcaagagctctgttcatggatgagatatcgaccggactggatagttcaaccacataccagattgtgaattccattgggcagaccatccgtatccttggtggaactgctgtcatctccttgctacagccggcacctgaaacatacaacttatttgatgacattatactcctctcagacgggcagattgtgtaccagggtgcccgcgaacatgtgctcgagttcttcgagttgatgggcttcagatgcccccaaagaaaaggagttgctgacttcttgcaggaagtgacatcaaagaaagaccaggaacagtattggtataggaatgacataccatactctttcgtgcctgtgaagcaattcgcagatgcattccgttccttccacgtgggacagtctattcagaatgaactttcggagccatttgataggagcaggagccaccctgcttctcttgctacctccaagtttggagttagctggatggcgttgctcaaagccaatattgatagagagcttctactcatgaagaggaactcgtttgtgtacatctttaaagctgccaatttaactcttaccgcgttcctcgtaatgaccacgtttcttcgtaccaaaatgcgccatgatacaacttatggaacgatctatatgggggctctgtactttgcccttgacacaatcatgttcaatgggttcgcggagcttggcatgactgtcatgaagcttcctgtcttcttcaagcagagggatcttctattcttccctgcatggacctacaccataccatcatggattcttcagatccccgtcacattttttgaggttggagtttatgttttcacaacatactatgttgttggctttgatcccaatgtgagcaggttctttaagcagtatctgctacttgttgcacttaatcagatgtcatcttcactgtttcgatttattgctggcatcggtagagacatggttgtgtctcaaaccttcggacccttatcattgttggctttcacagcactgggtggctttattcttgcaagacctgatgtgaagaaatggtggatttggggttactggatttctcccttatcgtatgcacagaatgctatttcaacaaacgaatttctagggcgcagttggaacaaaagttttcctggacaaaatgacactgtcggaataagcattctgaaatctcgaggcatatttactgaagctaagtggtattggattgggtttggtgctttgattggatatacactcttgttcaacctcctttacactgtggcactttcatttttgaaaccacttggtgactcttacccatcagtgcctgaagatgcactgaaggaaaagcgtgccaaccaaactggtgaaattctagatagctgtgaggaaaagaaatctagaaagaaggaacagtcccaaagtgtcaaccaaaagcattggaataacactgcagaatctagtcagatcaggcagggaatactcccctttgcacaactgtcacttagttttaatgacataaaatactcagtggacatgcctgaggcaatgacagcacaaggagtaacagaagagcgcttgttacttttaaagggtgttagtggttcgtttaggccaggagtacttaccgcactgatgggtgtgagtggtgctggaaagactactctgatggatgtattagcagggaggaaaactggaggatacatagagggagacatcaccatctcaggctatccaaagaaacaagagacctttgcgcgtatatcaggatactgtgaacaaaatgatattcattctccacatgtaacagtttatgagtcactcgtattttctgcttggatgcggcttccttcagaggttgattcagaaacaagaaagatgttcatagaggaggtcatggagcttgtagagctcacatcactgaggggtgcactcgttgggcttcctggagtgaatggcttgtcaactgagcaacggaagaggctaactgttgctgtggagcttgttgctaacccttcgatcatttttatggatgagcctacatctggtcttgatgctcgggccgctgcaattgtgatgaggaccgtaaggaagaccgttgacactggtaggactgttgtttgcacaattcaccagccaagtattgacatatttgaagcatttgatgagcttttcctaatgaaaagaggaggagaagagatatatgttggtccattgggccagaattcctcaaaactgattgagtactttgagggaattgaaggcattagtaagataaaagatggctacaatccagcaacatggatgttggaagtaacctctactacacaagaggagatgcttgggattgatttcagtgaaatctacaaacgatcagaactatatcaaaggaacaaggaacttatacaagacctaagcacacctactcctggttctactgatctccatttccctacacagtactctaggtcgttcttcacacaatgcatagcttgcttgtggaagcacaagttatcatattggaggaatccatcctacacagcagtgaggttactcttcaccatcatcattgcactactgtttggaacaatgttttgggacctcggaaggaaaacaaaaaaagaacaggatctattcaatgctgtgggatcaatgtatgctgcagttctttacattgggatacaaaattctggttgtgttcaacctgtagtggtggtggagagaacagtcttttaccgagaaagagctgccggcatgtattcaggtttcccgtatgcatttggacaggttgcgatcgaattgccatacatcctagttcagacactggtatatggtgtactagtctactcaatgattgggtttgaatggactgttgctaagttcatttggtacctgttcttcatgtacttcacattgctgtatttcacgttcttcggaatgatggcagtaggattgacaccaaacgagagcattgcagctatcatttcaccagcaatctacaatgcatggaacctcttctcaggatatcttatacctcgacctaaaattcctgtctggtggaggtggtactgttggatttgccctgttgcatggacattgtatggattggttgcctcccagtttggaaatatccaaactaaacttgatggcaaagaccaaaccgtggctcagttcattacggaatactatggtttccatcatgacttactatggcttgttgccgttgtgcatgttgttttcactgtgatgttcgctttcctgttcagttttgcaatcatgaagttcaacttccagaggagatga</cdnaseq> |
| Protein Sequence |
<aaseq>MAREIHKIASLRRESSLWRRGDDGVYFSRSSTGASSSRFRDEED DEEALRWAALERLPTRDRVRRGILLQAAEGNGEKVEVDVGRMGARESRALIARLIRAA DDDHALFLLKLKDRMDRVGIDYPTIEVRFEKLEVEAEVHVGNRGLPTLLNSIINTVQA IGNALHISPTRKQPMTVLHDVSGIIKPRRMTLLLGPPGSGKTTLLLALAGKLEDNLKV SGKVTYNGHGMDEFVPQRTAAYISQHDLHIGEMTVRETLAFSARCQGVGSRYDMLTEL SRREKAENIKPDQDIDVYMKASAIGGQESSVVTEYILKILGLDICADTVVGNDMLRGV SGGQRKRVTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSIGQTIRILGGTAVISLL QPAPETYNLFDDIILLSDGQIVYQGAREHVLEFFELMGFRCPQRKGVADFLQEVTSKK DQEQYWYRNDIPYSFVPVKQFADAFRSFHVGQSIQNELSEPFDRSRSHPASLATSKFG VSWMALLKANIDRELLLMKRNSFVYIFKAANLTLTAFLVMTTFLRTKMRHDTTYGTIY MGALYFALDTIMFNGFAELGMTVMKLPVFFKQRDLLFFPAWTYTIPSWILQIPVTFFE VGVYVFTTYYVVGFDPNVSRFFKQYLLLVALNQMSSSLFRFIAGIGRDMVVSQTFGPL SLLAFTALGGFILARPDVKKWWIWGYWISPLSYAQNAISTNEFLGRSWNKSFPGQNDT VGISILKSRGIFTEAKWYWIGFGALIGYTLLFNLLYTVALSFLKPLGDSYPSVPEDAL KEKRANQTGEILDSCEEKKSRKKEQSQSVNQKHWNNTAESSQIRQGILPFAQLSLSFN DIKYSVDMPEAMTAQGVTEERLLLLKGVSGSFRPGVLTALMGVSGAGKTTLMDVLAGR KTGGYIEGDITISGYPKKQETFARISGYCEQNDIHSPHVTVYESLVFSAWMRLPSEVD SETRKMFIEEVMELVELTSLRGALVGLPGVNGLSTEQRKRLTVAVELVANPSIIFMDE PTSGLDARAAAIVMRTVRKTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGEEIYVG PLGQNSSKLIEYFEGIEGISKIKDGYNPATWMLEVTSTTQEEMLGIDFSEIYKRSELY QRNKELIQDLSTPTPGSTDLHFPTQYSRSFFTQCIACLWKHKLSYWRNPSYTAVRLLF TIIIALLFGTMFWDLGRKTKKEQDLFNAVGSMYAAVLYIGIQNSGCVQPVVVVERTVF YRERAAGMYSGFPYAFGQVAIELPYILVQTLVYGVLVYSMIGFEWTVAKFIWYLFFMY FTLLYFTFFGMMAVGLTPNESIAAIISPAIYNAWNLFSGYLIPRPKIPVWWRWYCWIC PVAWTLYGLVASQFGNIQTKLDGKDQTVAQFITEYYGFHHDLLWLVAVVHVVFTVMFA FLFSFAIMKFNFQRR</aaseq> |
| Gene Sequence |
<dnaseqindica>17..372#2126..2246#4013..4101#4216..4300#4456..4615#4688..4764#4900..4953#5041..5131#5289..5590#5688..5969#6055..6368#6524..6684#6806..6909#6983..7139#7256..7500#7599..7931#8032..8322#8420..8503#8605..8738#8844..9071#9164..9335#10142..10396#10495..10755#caggccaacaattaatatggcgagagagatccacaagatcgcgagcctgaggcgggagagctcgctgtggaggcggggcgacgacggcgtgtatttctcgcggtcgtcgacgggggcgtcgtcgtcgaggttcagggatgaggaggacgacgaggaggcgctgcggtgggcggcgctggagcggctgccgacgcgggaccgggtgcggcggggcatcctgctgcaggcggcggaggggaacggcgagaaggtggaggtggacgtcggcaggatgggcgcccgcgagagccgcgcgctcatcgcccgcctcatccgcgccgccgacgacgaccacgccctcttcctgctcaagctcaaggaccgcatggacaggtaaatatcactgctggatttttccaaacggccacagcagatttttgcatgcgggcctctcgtccgtctgtaatcaggtgtctgtgaaaatcatcattttttcatatgggtatattgcatgtgaaaacggacggtcatctaaaccaaatgcatgcgaaaatagttttgaccaaaaaactaaaattcgtgggagagggcagccgccgccggccattcccgccagccgcttgggaggggaggtgagggaaagagaggaggtgagaaatgagaggagaggaagtgagaaaagataatgatgagttgacaatatttttcaagatggtgagaggaaaacagctagacttattggcgggtcttaaaggaccatctacgaaaattaattttcgtatgcggacgcttaagaggtttgtctacgaaaatagtcttatttttgtatggacttgttaagaggccgtgatcgattacgatccttctgcattctatggggaccctttatagaaaaatccatttttaagtagtgtatatagttatatacacgtagagaatatgcatcatgcatatattgttaattattttgcaaaaatgaaacaataaaacgatctctaagctagatttgatcgcttgataacctggatactacaccgtacctctggttcacttagcttacctgttgcttgcatgcacacattggttattgatattgtaaacatatatagtagtatatactttttatatcctttgagtacacaccgaattaaccttggctgcatgagacaagtggttcccatgggtgaaacttgaccatacagaactcgtcatgctttatgcttacagcaagtatatattgatgttaaactctgagagtaccatgtaggtttcgataatgatgtggataggatagaggacaatcgagctgcctcttatacaagagaaactgaaaacacgagctcattaaaactagaaagagacaggatgtcagcaagaggaaactagttagtaaaataaaattagtgtacagcattaggttagtgtaatatatctggtaatatattgttaagacacatatcatatcatatagtcgatcgaagttataaaattttgattttaatgatattaaaatgtctggaattatgaaaccggagagagtaattggttattactcctgaagagatatggacaaaattagaagtagtacgtagatatatactccctccgtttcaaaatgtttgacaccgttgactttttagcacatgtttgaccgttcgtcttattcaaaataatttgtgaaatatgtaaaactatatgtgtacatgaaagtatatttaacaatgaatcaaatgatatgaaaataataaataattacttaaattttttgaataagacgaatggtcaaacacataataaaaagtcaacggtgtcaaacattttgaaacggagggagtatattaacttgctcttagtcatgcaactaaaatagagattagcttacatagactgcggttcatttaattgtacttaaacaaaactcatttaaaatatgacaacacttgaactcgattcgatctcctaatttgcccatgtcatgtgtcctgaagagtcaattatctaaaaaatatattacacaacagtactaaaatatacacattgatgttctctcttcttactctcccttctcacctcaaacctctgcagattggcccaactggcaatgttatggatcacctactaattattattgtacctgtacttgcagagtggggatagattatccaactattgaggtacggtttgaaaaactagaggtggaggcagaggtgcacgttggcaacaggggcctgcccacgctcctcaactccatcatcaacacagtgcaggtaatacaatatacagtcagccagtagtgctctaattttttaagacggcaatgctcctaccagaccttaggttttttaggagcttcttctagctctacagctactctaaacagtttataatttcactcagcttccgagaagctatagttaattagttatataatctagaaaaataaactaagtcagaacttaaataacttttttttaattctcatcaactagctttttatcagttgcttctcaggaccttcaatcttaaagctctcataaacaggatcctagaggatctaggaagatatgataacccttttacattgtgtgattacaaaatggtctacgaacaaggaaaattacaagtactttgaagaaacaagaaaagcaaccggatccttgtgatgccatcgcaaacaaaatcaagatagttgatgccatcaaaccactatgcatagatacattgggtgaccttaccgggctgcattaaccttgcacaccacaattcttgccctcgtgggggtctccgatcaatgaaggtttggttgtctctttgcgaaaacgaccatcttaaccttttagttgaagtcgtcataggtgagaaaaatgattggcattgaccttgtaaagcatgcatcagagttttgtcaattggtgcaaccgcgcctatagccaataccttcaacaaggaagcgaaacgctaccaggtacaaccaactaaagctagttctagagatttaaccttaaagtcaaggaactgatacatgggcatcacctaatcggttccacagttatattgttcctccattcctagccggttcctccatatctcccactcttagccctatttcaattggctataaactacacaactgcaacctttttagatgtgttaccctgctgttgtagtgttgcgagcaagtcaatagatacacgcccaacatccatgaggtccatctaaagagcagatgagttgtcgatgtaaatgataccattgaagccaaaatgtggcattactctacatgataccaaagtaattgtgagtgacaatttaaccatacttaggtcatttaccaaattatgaaacagattttttattcacgcttcaaaaaatacattttctcgtagaactttttttattgtttacaccacttgttttaaagtatttttaagtttatttattaaaatatttaatttatccgtataatcaaatggataatctgcaccaacaatcagttcccatttatatttatgaaaacataagctaattttattttcaaaatctagcttcacgtaaaattacgtgggaatattcgctagctagttgtggttagtaggagtacgtaggaagcccacatttgcacatcacgcatcagaacaaaccaggcccacggtgaaactcaccaattctcaccactccgtcctctcctcctcctctcccgagctctgagcctgccatctctctctcaccgcctcacgccgtcctccgacgttcgccggcgacgttgatggcgccacgacctctcccgagtcctgacgacgcgccacctcagccttctctcttcctagccatggagagcggtcaactcccagcaccacgcctctgcgcttttgagcggcatttcgccgaacatgtggcgtgcatggtcggattctcaaagcaattgtaatcttcttgctccgtcgatgcgataatgcgatacttcttcatttcgaggcgtaataatatgtaattttccatgttaagttgcttcgaaatcgttctcttggtgcaggcgatcgggaacgcgctccacatctcccccaccaggaagcagccgatgaccgtcctccatgacgtcagcggaataatcaagccccgaaggtaaaaccacgagctagacactgatatagcacaaatttgcgtaaacactaacacattttctttgtcgagatgtcatgctgctaattatcaacccatgtcttgatttaatttcaggatgacattacttctaggacctcctgggtcaggcaagacaacgttgctcctggcattggctgggaagcttgaagacaatctcaaggtccagaattgaacctagctatgtgcattttcactccattatatattattatgttcaaatcttgtagcatggccgtgtcgctttgcggttcttccgtatgagggggcaaaaaaaaaaaagaaaatcattttgtgtttaacttgctgaatgcgcaggtttctgggaaggttacctacaatggccatgggatggatgagtttgtgcctcaaaggacagctgcttacatcagccagcatgatctccacattggagagatgacagtgagggagaccttggccttctcggcacggtgccaaggtgttggatctcgatatggtatgtgtacctaaaatattgacttgttcttggccatattatggtgggatactgagctaggttgttttccagacatgcttacagagttgtcaaggagggaaaaagcagagaacatca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