Difference between revisions of "Os01g0343100"

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(Created page with "{{JaponicaGene| GeneName = Os01g0343100| Description = Protein of unknown function DUF594 family protein| Version = NM_001185392.1 GI:297719918 GeneID:9269304| Length = 66...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0343100|
 
GeneName = Os01g0343100|

Revision as of 18:50, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0343100

Description

Protein of unknown function DUF594 family protein

Version

NM_001185392.1 GI:297719918 GeneID:9269304

Length

6613 bp

Definition

Oryza sativa Japonica Group Os01g0343100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:13693031..13699643

Sequence Coding Region

13693159..13693177,13697285..13699479

Expression

GEO Profiles:Os01g0343100

Genome Context

<gbrowseImage1> name=NC_008394:13693031..13699643 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:13693031..13699643 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgactccatccatcggtgctatgagatacgaaatggagaaatatgtgcctgtgctcttgagcttcgcaatgcaagtggtcctattctttgcgggtagatttcacgtgcacatcactgacaagttcaccagggtcttaatctcatcaacttatctaggggcagatatcatagcaatctatgccctcggtggcctctcacgacaagagggtaacccccaatcaattgctttcttttgggcgccatttcttcttattcatcttggtgggcaggacacgattactgcttttaaaatggaggacaagaatgcatggttgacacgttcagggaaacttctgttctatgctgttctggctgtttttgttttcttcaattctattggaagacacaaggagcttctacttgcaggaatatttatgtttgctactggatttatcaagtatttcactaggtcatggtctctcaagtgggggagctttgaaagcattgagaactccactattcgacacatgtatgagatacaattgccagaagcgagcaacgggtcgaatatgacctattacgattatgttctcactgctttaaattccatgttacaaatccatgatatctttgctgcacgcagtctcaggtctactgctaactctgagagtgaagatgaagaaatagtagaatcggaagaagctgctagatccgtgagagaagatgaagaagcagtagaattggagaaagccactaggtctgtggatatagatcaagaaatagtagagcagaaggaatataaaatattaattaaagatgatgaagtagtagaaccgaaggaaaataaaatctcaactgagaatgatgaagctatacaatccacaggaaataacacaccaattgaaggtgatgaagaagtacaattggagggagatgaaatatcaatcgaaaatagaaaagcagaattggagaaaattataattgaaactataataaagcccgaattaagtttggtgcagcttcagctcggcatgatgtatgatgacctctacacaaaggcacttcttcttagaaaaaagggaggtattgcacttcgattcattgctatatctacctcaattgttgcttttgccctctttctttcaacagagaaacggcggtatagtaaagttgatattgcggtcaccatgtcactattcattggagaacttctccttgaagtttgcgcagtgcttattttcatgatgtctccatggacgtgggcatggttgaaggttcgaaagtacaactggcttgcctgtttttcatggtatcttttttccagtcgcattggatggccagagaataggccacggtggtctaattcaatgggacagtacaattgcgtgaacaggttggtaggcatcagcccgccaacatcatgcacacccaaaattatgacctatttgagaaacatagcaaacaaagttggtgctaaggagatatcttggataaacaagctgatacacactgggtatgtcaagacggatagagatactatggaacgagttgtgtttggcctttatggcttaatgaatgaagtcgatggtcaggatacagaatacctagaatggagatatgttggctcattcctggaacagatacaagatgttctcaccgcagactttggtactgctcttctcatgatgcatatggtcacagaggttttcctcaggcaataccctgggaatcattccttggtggatgtctgcagaaaactgtcaaactatatgatatatcttttggttaaccacccttccatgcttccactcaataccagtgcaatatcctcgattaaaactgcggaacgtatgttccagaggaggactaatgacatctctgatgttgagcattacaaaaatatccatgactcgttactagtgggtgaccagcctgaaggagatggggtacttgacgagctggtcgaaatgtgggtgagagtcctcctctattccgccggcaagtcaagggcggagcttcacgtggaacaactggccagtggaggggagctcatcacctttgcttggttactcatggccaaaaatgactgcggtgactccaggatgaaaaggattcaaatcacaaattttagtcctcgtgatgaatctgacgattgctatgatctccctatgaaggaaggccacgctttccatatcgtccatcgtagtgaagtcgatattcagcgtgattga</cdnaseq>

Protein Sequence

<aaseq>MTTPSIGAMRYEMEKYVPVLLSFAMQVVLFFAGRFHVHITDKFT RVLISSTYLGADIIAIYALGGLSRQEGNPQSIAFFWAPFLLIHLGGQDTITAFKMEDK NAWLTRSGKLLFYAVLAVFVFFNSIGRHKELLLAGIFMFATGFIKYFTRSWSLKWGSF ESIENSTIRHMYEIQLPEASNGSNMTYYDYVLTALNSMLQIHDIFAARSLRSTANSES EDEEIVESEEAARSVREDEEAVELEKATRSVDIDQEIVEQKEYKILIKDDEVVEPKEN KISTENDEAIQSTGNNTPIEGDEEVQLEGDEISIENRKAELEKIIIETIIKPELSLVQ LQLGMMYDDLYTKALLLRKKGGIALRFIAISTSIVAFALFLSTEKRRYSKVDIAVTMS LFIGELLLEVCAVLIFMMSPWTWAWLKVRKYNWLACFSWYLFSSRIGWPENRPRWSNS MGQYNCVNRLVGISPPTSCTPKIMTYLRNIANKVGAKEISWINKLIHTGYVKTDRDTM ERVVFGLYGLMNEVDGQDTEYLEWRYVGSFLEQIQDVLTADFGTALLMMHMVTEVFLR QYPGNHSLVDVCRKLSNYMIYLLVNHPSMLPLNTSAISSIKTAERMFQRRTNDISDVE HYKNIHDSLLVGDQPEGDGVLDELVEMWVRVLLYSAGKSRAELHVEQLASGGELITFA WLLMAKNDCGDSRMKRIQITNFSPRDESDDCYDLPMKEGHAFHIVHRSEVDIQRD</aaseq>

Gene Sequence

<dnaseqindica>129..147#4255..6449#agtagcaagttgcatatgcctgcctgcgttcttctatttaaggtgaagccagacaggcaagaggcaggtccgggaacatatgcaagaggaggctcaggaagcagcaagtttgcacatccaggtccaacatgacgactccatccatcggtaagtatatgtgtgtgttttctttatccccataaacagtttttcctcagtaacaaatgctcgtcggtttgagatatgactccaattaaactttatattttaaatatttggtccagactagtatgcatcacatcgaattttaattttagtagcgaaatgcccatattttgctatggataaaataatatataataatatggcatagataattattgttttatcaagtatgctattattgtttgtttgctcatttgaatatatagtatttacttgaaacaaatattagattattgtataatatcataaaatatgatggactaatttagaaaatttgctaaagtagtggtagagaggttattataaccaccaccacttgttgtattttatagtagtatatatagataggactatcaccggcatagaaaggccaatctctaccgtttcaaaaactggcatctagaccaccagtgttactcattttggggacaaagtaaaatagatggttacatcaacatgttactccaatctataatacaatttcaatccagatatcaaattacataaagatcaactcacaacagtaaactaaacaatcttacaataaaatcttgagatcaagttgatttaaaaagcacaaacattcacttcatgccatcggccccaccagcctcaggtacaattgatccgtcggccgctagctttcctgatgcccaatccgttggcctttgcctcgcaatgtcagatctgtcagccatcctaagttgccgccgtcatcaccctccctatctcacttcctccccagcacgctagaggcggcatcgtgggacggtggggatcccatccgcaaaccaggctctagggttgttggataagggcgtttacagtgcgttgagttaacgttggcattcagttgcatcattcccctaacgaatattccgtgccacgttcgcttctaccacatctacctaaaatccctgtatccaactttgatcactcgttcttcagccaaatcctaggtgagtagcgtggggagagagccccgtggaggtcctgacccctgctcagcttgcacacgtgtatcttgctttttttccttgagtcacggcatggggtccgaacggcactatgaatcctatcttactataaagttataacctactaattctaaagctcaacatgcaaacataccacctcatcatccactagcaataattatataaaaacttatgcaagcatgcaatatcatatataattcattctacaaatcaacatccaatcatttttttcacattattttttacaatatttttaacatatatatccatcatttttataatacttaacataaattcatcaatataatcaaagtgcgggatatcatatttcatctacaatctgatacagagtctattaaatttatttctctctgaatatatatagtttgacaaactatttttatttgttgtaaataactaatataatttacttttagcttgaatattaaaaaaaatattaaaagtcacttagtaattctccttctcctcctagtggtctaggatccggtgccaccaaatccgtcagctgatgccaccctccagcacgataggaggaggacaatggtgcagctgggtatggaggcagcagcggcatggctaggagaggcggtgacgtgggtagggttgttgaggatgaggaagagttgcagtcggtcatggggacttacaattttctcgtgtgggattgcctttaatacggttggccagctaactttattgccgggtcataaaagataaaaactgatatttaaggatttagggcctgtttaaatccctggtaaaatttttcaccctattatatcgaatgtttggcacatgcatagagtattaaatatagaaaaaaacctaattagacagtggcgtgtaaattgcgaggcgaatcttttaaacctaattattccatgatctgacattaatgtggtgctacagtaaaaatttgcaaataacggattaattaggcttaataaattcgtctcgcagtttataggtggaatctattattagtctacgcttaatacttcaaatatgtgtccgtatacccgatgtgacacgctaaaacttttcacccctgatctaaacacagtcttaatcatatataaaattaaggcactacaaacatcacacaaattgctatttaaacccattcatacatagaagatctcttctctggtaacctagctaccatcggtacaaccaccaagtctgttcgtatcgtctgcctttgaggcaaacggcaaaatttgccgttgataacatccaaagcgttcatcactcaatcaaccgtaaccgttgcatgtttaggctcacctcatagactaattaacagacaactaattaatagaatctgatgtgctaataaatcactttaacaacccactaatggatataatcaacttagccattttttcctgtattcacagtaaacaaaacagaaattctcatacaactaaacattttttctgcataccactatgtccattttttatccattattttagacgcttgcacaatcttcaataaacatgtttcaccatttatattttctaaataaattagaaaagataaatgatgaaacacgtttattgaagactatgcaaacgttcacgtcaaaaaaatattcattcaattacactcatctgtataaatttataggctagtgtaagataatgacatctaaaatttatagtcaatgcaatataaactcacttgtaattacaaaatcttctaagaattttactataaaaaggtaattaacgacataataaaataaattattatcttagtttagaggccagataaataaaatcaaagtaagatatttattaatctccatgaacttcatcaatcatgtcaagaataagacgcaatcagtaagctaaacatcttgaattcaacctcaaatttcagccatccaactatattataaaaatatgcatgggacgacattgtttcacttggcggaagagtggatcagtcatttgagctggtatggatggcaacagatgaactagacaacatctatggacggtccgtgggttagaggcgttcaatatataaaagatggtaaccaggaaggctcctgagtggtcgtggggctaaggtcgccagcagcatggatttgatcccaagggatggcacctagtggaatttccactctaaagcaagaagtacgataggttaggaggtagatggaggcaggcggtgttgtagattcatgggaggaagggatgccatggcaatggtctatgcagatggagaaaggagcattgtagagaatcaagagcacacaagtgggtgggaaacagaggtaatggcttagagagagaaagagaggggggagaggagatatgatggatcagagagaggaaagtgcatgagttagggctttgtgttgagagatgtttataaattagatggagacccaccatttcatgttttatccaagtgttctaacgatgacttatttagagaaaatccatgaggtgatctatatttcttatataagagaaccattgacatcctgacctcagtatcaaggacgaatgtccatagataaaaaaaaatccaggttatcaatctatttggcactttgtctatttccttccaactttctctagatacccttgttaattacctaatgtggtgggtatattatttgtattttgtaagataaaatacttttactggtagtgactacattcgtgtacataaggctaaaacataatatatatatatatatatatatatttgaaccaaatagtatatgatcgactagataattcgctatgttgtccaagagtaactttacggtgatacagtattctataccaatattattataaggagatattaactgttgatttatgaagtctactaccacagtacaaaaattaatctactatatgagtggtttggtagtataaataaatatgaagatttggattataaaggatgaatggtatggattgattgtactgccatttataaagcattgcttcttccaattgccgaagtcacactgaatgatattgtatgctattctaatcaacaggtgctatgagatacgaaatggagaaatatgtgcctgtgctcttgagcttcgcaatgcaagtggtcctattctttgcgggtagatttcacgtgcacatcactgacaagttcaccagggtcttaatctcatcaacttatctaggggcagatatcatagcaatctatgccctcggtggcctctcacgacaagagggtaacccccaatcaattgctttcttttgggcgccatttcttcttattcatcttggtgggcaggacacgattactgcttttaaaatggaggacaagaatgcatggttgacacgttcagggaaacttctgttctatgctgttctggctgtttttgttttcttcaattctattggaagacacaaggagcttctacttgcaggaatatttatgtttgctactggatttatcaagtatttcactaggtcatggtctctcaagtgggggagctttgaaagcattgagaactccactattcgacacatgtatgagatacaattgccagaagcgagcaacgggtcgaatatgacctattacgattatgttctcactgctttaaattccatgttacaaatccatgatatctttgctgcacgcagtctcaggtctactgctaactctgagagtgaagatgaagaaatagtagaatcggaagaagctgctagatccgtgagagaagatgaagaagcagtagaattggagaaagccactaggtctgtggatatagatcaagaaatagtagagcagaaggaatataaaatattaattaaagatgatgaagtagtagaaccgaaggaaaataaaatctcaactgagaatgatgaagctatacaatccacaggaaataacacaccaattgaaggtgatgaagaagtacaattggagggagatgaaatatcaatcgaaaatagaaaagcagaattggagaaaattataattgaaactataataaagcccgaattaagtttggtgcagcttcagctcggcatgatgtatgatgacctctacacaaaggcacttcttcttagaaaaaagggaggtattgcacttcgattcattgctatatctacctcaattgttgcttttgccctctttctttcaacagagaaacggcggtatagtaaagttgatattgcggtcaccatgtcactattcattggagaacttctccttgaagtttgcgcagtgcttattttcatgatgtctccatggacgtgggcatggttgaaggttcgaaagtacaactggcttgcctgtttttcatggtatcttttttccagtcgcattggatggccagagaataggccacggtggtctaattcaatgggacagtacaattgcgtgaacaggttggtaggcatcagcccgccaacatcatgcacacccaaaattatgacctatttgagaaacatagcaaacaaagttggtgctaaggagatatcttggataaacaagctgatacacactgggtatgtcaagacggatagagatactatggaacgagttgtgtttggcctttatggcttaatgaatgaagtcgatggtcaggatacagaatacctagaatggagatatgttggctcattcctggaacagatacaagatgttctcaccgcagactttggtactgctcttctcatgatgcatatggtcacagaggttttcctcaggcaataccctgggaatcattccttggtggatgtctgcagaaaactgtcaaactatatgatatatcttttggttaaccacccttccatgcttccactcaataccagtgcaatatcctcgattaaaactgcggaacgtatgttccagaggaggactaatgacatctctgatgttgagcattacaaaaatatccatgactcgttactagtgggtgaccagcctgaaggagatggggtacttgacgagctggtcgaaatgtgggtgagagtcctcctctattccgccggcaagtcaagggcggagcttcacgtggaacaactggccagtggaggggagctcatcacctttgcttggttactcatggccaaaaatgactgcggtgactccaggatgaaaaggattcaaatcacaaattttagtcctcgtgatgaatctgacgattgctatgatctccctatgaaggaaggccacgctttccatatcgtccatcgtagtgaagtcgatattcagcgtgattgatgttgttttgttgattaactagtacatggatggaatcaagtgagctagctagctgcaagtaacttatgtttgttttctcatgtcacagggagtatattaatgtctttgcttcggtctgaatgtgctagctagctagctagtctatgtgtgtgatgaaataattt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0343100, RefSeq:Os01g0343100