Difference between revisions of "Os01g0502400"
(Created page with "{{JaponicaGene|
GeneName = Os01g0502400|
Description = Prolyl 4-hydroxylase, alpha subunit domain containing protein|
Version = NM_001049670.1 GI:115436783 GeneID:4324480|
...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os01g0502400| | GeneName = Os01g0502400| | ||
Revision as of 18:51, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os01g0502400 |
|---|---|
| Description |
Prolyl 4-hydroxylase, alpha subunit domain containing protein |
| Version |
NM_001049670.1 GI:115436783 GeneID:4324480 |
| Length |
10116 bp |
| Definition |
Oryza sativa Japonica Group Os01g0502400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:19051149..19061264 |
| Sequence Coding Region |
19051306..19051629,19054887..19054934,19055959..19056135,19056227..19056377,19056477..19056563 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:19051149..19061264 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:19051149..19061264 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggctctagacggccccgcggagcgacgggacgaggcccaggccgcgatgggtaatggcaacggcgtggccccgccgccgttgcggccggccggccggccctccggggcgccggcgtgcgcagatcggcggctgcggttgaaccccaacatggagcacaagccgcaggactacagcgacgtccgcggcgagtacgcaccagctgtatacagtgcacttgagaggcacctcccacccagtgtccttgatgccaaccgggaaatcaagctgcagctcatgcgagaggtcctcgggcactattggccccatggtgagcgcaacaaggttcaaaggcacagagaatacagacagagaatactcaaccattataagccacttcataaagagctatacaaaatgcgcccttcatcgttctttttaccaacattccttgaagctattaggaccaatacagaagaaagctttagaagcattatgactgagccagttcctggtgtttattcatttgctatgttacagcctaatttttgtgagatgctattacaggaggtagagaacttcgaaaaatgggtccacacaatgaaatttaagataatgaggccaaatacaatgaacaagtatggtgctgtccttgatgattttggcctggaagttatgctgaaccaattcatggaacagttcatagctccaatgtctacagtattatatcctgaggttggtggaggaacattagatacacaccatgcttttgttgttgagtatgggaaagacagggatgttgaactcggtttccacgttgacgattctgaggttacattgaatgtttgccttggcaagcaattctctggtggtgagttatactttcgtggcatccgttgtgagaatcatgtgaattcagagacacagcatgaggaaatgttcgattactctcatgttcctggacgagctgtgctccatcgtggtcgtcataggcatggtgcccgaccgacatcatctgggctcagaatcaatcttcttttgtggtgcagaagctctgtgttcagggagatgaagaaatatcagaaggacttttcgggctggtgtggtgaatgtaaacgtgagaagaaggagaggcagattcatgctgttaaagcaactaagctggcgtttcttaggggtgctggaggggcaacgatttaa</cdnaseq> |
| Protein Sequence |
<aaseq>MALDGPAERRDEAQAAMGNGNGVAPPPLRPAGRPSGAPACADRR LRLNPNMEHKPQDYSDVRGEYAPAVYSALERHLPPSVLDANREIKLQLMREVLGHYWP HGERNKVQRHREYRQRILNHYKPLHKELYKMRPSSFFLPTFLEAIRTNTEESFRSIMT EPVPGVYSFAMLQPNFCEMLLQEVENFEKWVHTMKFKIMRPNTMNKYGAVLDDFGLEV MLNQFMEQFIAPMSTVLYPEVGGGTLDTHHAFVVEYGKDRDVELGFHVDDSEVTLNVC LGKQFSGGELYFRGIRCENHVNSETQHEEMFDYSHVPGRAVLHRGRHRHGARPTSSGL RINLLLWCRSSVFREMKKYQKDFSGWCGECKREKKERQIHAVKATKLAFLRGAGGATI </aaseq> |
| Gene Sequence |
<dnaseqindica>158..481#3739..3786#4811..4987#5079..5229#5329..5415#6823..6947#7195..7313#9558..9669#9775..9810#aatccagtgtcatttgactcatttcctcttcctgccctcggggagtacgtgaggacctaaaagtacctcgcccccaaaccctagaaccccacaccacacccaattcgcccacccaaaccctagtcctcccgatgctgtgatccgccgcgcgtgccccatggctctagacggccccgcggagcgacgggacgaggcccaggccgcgatgggtaatggcaacggcgtggccccgccgccgttgcggccggccggccggccctccggggcgccggcgtgcgcagatcggcggctgcggttgaaccccaacatggagcacaagccgcaggactacagcgacgtccgcggcgagtacgcaccagctgtatacagtgcacttgagaggcacctcccacccagtgtccttgatgccaaccgggaaatcaagctgcagctcatgcgagaggtcctcgggcactattggccccatggtgagcgcaacaaggtgaggttgtggatcttgttagatagaaatatatatgggccttgcgtgtttttttaagtgtttgctgtggcccttttgtcgatagaattttgttttgtttttttttttttactacggactctgaaattagagattcagaatgggcgatggtgaagaaagtaactgctgagttgtatgcccattaggtggaataatgtggttcttgtgccagcaacttctggcaggcaggtgttgtggctggagaagggtacgaggtgcagccacaaatgctggactaaatccaataaccaaaagatttgtctgttcattttgcataagacaagctgtagccagcccagacaataccagacaattgctgtgaaaaatttgatctggatttggcatacctgctgttaatatgtgccaatgccccaatctagtacaccctttctaggtataactggatgcatgtgatgatggaagatcctatttaagaatgcatgcaattttgtaacttatattagatgaacataagggactaattaaccatgggcaagtttggtttgatgcgaaatattgccctaccctttatttggtagcttcaaactcttgctagctatttggattggatccccccctcccccgaaaaaaaaaatcttgccaaatcaatataattgatacaactttaccctaccaaaaatttggtagtgccaaagcttgcccaaaggtttggcattaccaatggtttggtagagtagagaaccaaactcaccctaaatacatacacaatttgggttagagacaaaatattgtgataatcacttcctttctaaataattgtctctatgggttaatcactaggcttttccttacctaatcgtcacttggtccaccttaaaggtgtcataatatccttctgtttgcctttatctgctagttatgccatggcactttccttgatcaacctgtgcttatgaaaaatgtttggtggaagcctatctcttgcttgatctgcttgattgatacaacattatggattggctgtttctaggacatcctaaaattagtcttgttcaatacttatattatgacgccatcgatccgaactaatctatcttgaactgcaatttggatctatgcagtactgtactaattgaacttcattctataaaggattctaaaaaatcatattgtttatctgtagcttaagagttctttttccttgtagcatggcaaattgcatgatatatcttggttgtcttggaattcgaaatttgattttagttttggtgattgagaaaaaaaaagagtaaattcgactggcagtatataaacttttaagatttggtgcaaaacaaggccaaaatgaccacatgggcaaatctggctgacttgacaaggattccatctagctgagcagtggaccctggagttttcaggagccaaatcaaagtcttcatgcacataaatacaattagggtccttattcatgaaaagtgaagtacaaataggtcaaatagtcttacataacacaaacaaacgtttagtcatttcgggctttttttcatggcatataaatgcttgattacatcccgagaaagatgatcatatattcagaggaagtgaaaaggtgaaagaccacctggtcatctggtgttgcctgttgccaccttcagttgctggttgcgtgctacccagggatgctacgcttgcaggccatgagttgcagccctgtcaggcatcgtcgccagtactccatgctcagggggttggggctcagctgttcaggggccattctgcaagggagtgctattggctttgctagactctaactcactggcagttccacttcacacgcgcctccaacggaaaccctcaagatgttgaaaggctttgttgcatgtgcactcccgcattgacgcaagcacacgcatggtcttccggtgggtgactgcacctaggcttcttgggctttggtttactacatcctttttcctttttgcaaatttgttgggtatgccagtgtccacgtagcatcccatgggtccgcccctgtagatgaggtgtacttcattggttagttgttccttgatattgctgtagaaacgaaagcatgctatgttatggagcttcttgtgttgttccggctaacttgtaatcgaagaatgggattgaagataaggatgtgaatcttatcccgtgtaaatagatggtacgtacccggataaggtgggatccggatacctctcaatagccagttccctgtgtctatataaagggaaccgggaaccctaaagcaggtgatcactacacgctactcctaatgtcgtattgcgaacccctacacagatctaatccacataagtggactaaggtattacctctccctaagggcctgaaccagtatccctgtgtcaccatccctccatgatcttttgcaccccataaatattattgctaatccgtagaattgacaaggtgagtcaacgtggctgaacccataccaggatagctcacaacacaaaccatcacttggttgtcatccttgttaacaccaaggcaaccagatttgccttcttggattgtgtttgtcttggttcgcacctatgagtctatcatattttgctagttattgcactaatgtgtatcctccattcaagtttgtttaccacaagtgcaatcatatttgttaaaatataaagtgtatttggtatgaagcatataatttatgcaaattttgaggtaataggagcaaagttgcagaaagaaaagatagccatttaaattctgctgatattacttgcatttgcaagactagaatggattggtatcacgggaaacggatgcaaaaattaagcaatgcttaacatcaatatatattttattgtttacaataaactttgatgttatgcctagtggtaggactttttagtataagtttatgatgttcaaagaagctgttactgcataccacagagatcaggtcaaaatatttgtggctgcttcagatatttgtaattgcatattaatttcatgtattaaatttaattcgtcatgagatgctataccttagttttgcaacgacgagggagtttgagctggaacatgtcaaaagaaaacacatgtagtggtttaatttttccttaagtagtatgagtgaacaaagaagggtcacctcgaattattttttgcatttccagagtttcaaccttcccattttctgcagctgtaagattagttctgttgagattgtcatatgaagtgttcttttattgcaggttcaaaggcacagagaatacagacagagaatactcaaccattataaggttagcgtttcagcatagctgacattattcgaattatctctaaatattttgaaatgggggaatatgcatgttttttcttgtgcataactatatttgcacatagaaatatgcagtccaggaattcaggaattatatcatatattgtatgatttgttatttcttttgagcgttaagcagggtgtgatatgagatgtttatggaacaattgtattggtcctgtacgaccagccatatgtgatttcccaggtgattgcatgagcaaaatctttgttcttgaagagtgcagctggttcctggtacaaaagggcacaattggttggacaagaggtccgtgaagagtgtagggtggtaggatactggaagatcatagataaaagaattacaatccaggcatccagtatgcgctagtaattcaatatttacaactgtttgaatcaagtatgcatgactgtgacagagcactacaggtaccatgaataatttagttatggagagccttccgagatttggttatccaatcagcatttcctgtgttggttgccttgtgtgcatgatcttagaaagctgcttatggaatatttatcttattatgtcaaacgaatttggaattaaatttctatgtttacatggcaaaatataaaaaaatatacttcttttattaaatgaagtatacttcttttttattaaaaaatatacttctttctatgtcgatatggcaaaataaatttctatggcatgagcggtaatgaatccccagacaggagaattaaatgaattgtgagctgacgtgggtttcagtcaacaatatgtgggttccttgatttcactaacagctagagctcaagcaagtggaaatatcaatgaaactaaatggcaccatgtgtttgttacagttcattcatgtgtacactacagttgtagtgtatggactggaagtcatcaatcttattgagaaattgaaactaaatctatttgttttttgtgctagtaataataacttatattttttttattttcctgacagccacttcataaagagctatacaaaatgcgcccttcatcgttctttttaccaacattccttgaagctattaggaccaatacagaagaaagctttagaagcattatgactgagccagttcctggtgtttattcatttgctatgttacagcctaatttttgtgagatgctattacaggaggtatggtagcatataacatacaattttgatattgctatatcatgttttgttacaaacttacaatgataaaacaatgttttacaccttgtaggtagagaacttcgaaaaatgggtccacacaatgaaatttaagataatgaggccaaatacaatgaacaagtatggtgctgtccttgatgattttggcctggaagttatgctgaaccaattcatggaacagttcatagctccaatgtctacaggttatcttatcgactgctatccttgttaaatagaggcagaatcactagcattttcaaaatatatttcctatattgattttatgctgtgttaatcttcagtattatatcctgaggttggtggaggaacattagatacacaccatgcttttgttgttgagtatgggaaagacagggatgttgaactcggtaagttaccattataaatttataatattgttttatacttaatagcctgtaaaatcatatgaagtaaaagaattgttcttgattgatcatgtctgcattcagctattccatgtaactatggatactatttgtattgttgttcctccctgttgagaaatcaatcacatatcagtttttgagccaatggtttggcctttcctacttaaaatggcaatatgttgaaactagtttcaatgactagatgataaatcaatatgaccaactttcactgtcaggaacttgtggaactgctatcaaaggtagaggtcacatcttctctatctagtctggagtctggaatttctcttctctctctgtctactatattttggacagagggagtatcttattgtgcactatgcgcttagatatatttgtactactatcacctaggggtgttcatcgacaggaaagattagctatcatgatgaaaaatgaatgctatgctgtctcttaatgaagtagaacaaagaccggggctgatagaatggcatgataaaaccgttttctttctcagtttttttttttgaggagggggggggggcagtaaggattcaagggactaagaaagttcttaagttcaactaacttagtgcccgaaatttcagtggataacttacatctttccaaaccttgctttaaactaccttacgaacagcagttgagaacttgaaatctgggcagcagatgagatttagtaattctgctttttggtgcctacatgttgtaccgtttattttacaactaattgacattgtagtcatgttaggccactgaaatgatcatcagttaattgtttggggtgttctcgacttcttgttataaatgaggccagaggcataatttgcttcagaaaggagtggctagtatcatgttaccagaaactttaaggtccttgcctattagtcttaaattcttttcagagccaatccaccttcccaggttgttcctgcatcgcacatcgcacacattactagaatttctggatgttaagatggtttcacgcttttatttacttcttttatccaggtagttaaatatgaaacattaaaagcatgtcagaaaacttcattctattcgcgtgaaattttgatatggtatatttgtcactgttctaaaacaatacctacaaggccacacacaaggaatgggtgcgcaaccttgtaatgcttaagccgcattagagttccataaagaaatgttcttttgtaattaacagagttccataatttcattaattttcttagttgcacttttttttaagtatatcgatttgccttagttcctaatgatacttttgccatttttcattctcagtttttgttcaaacatttcttttctgttctaaaccgtttctcaacattataggtttccacgttgacgattctgaggttacattgaatgtttgccttggcaagcaattctctggtggtgagttatactttcgtggcatccgttgtgagaatcatgtgaattcagagacacagcatgaggtagatgaacttttatgttttagttgcatttaatatctatttttaaatttcaaacccacctcttttcttctcttctgtgagtgcatttatgtggtgttgaaacttattttgttcagattttttttttgcatgaaacttgtcatttacttgcaacatattctggttaatttgttcacggaagttacacaatacataattgaagatatatatttttttacccttttcaatttcattactcatgttgcaggaaatgttcgattactctcatgttcctggacgagctgtgctccatcgtggtcgtcataggcatggtgcccgaccgacatcatctgggctcagaatcaatcttcttttgtggtgcagaaggtatacaagtcttacagatcttcccatacaattttgattgtcaaagatttcagtgaccttttgtcttgcttgtttaaagcacatactgggcatgtattatagctaccgtttatgcggacatttgaggtttagttcagtgaaatattatgaccatatatatgtatgcatttttttccttaacttatcatgttttattggtgcttgtttcacggaaagttgtgttggtattgcgtagttcatgtcaagggtaagaaacctgaaactacaaaatacacctgatcaaaggcctctcatgagtgctgtggaatcaaggtagttagtggaatctttactgatttaagattttgctgttacagcttgcaaaagttacggagtcctattgttttgaagggattagctatttccaacatggttgtagtctcaacgaagacattcctcatagtcaaatgttgacaatagttcctggaaatcaatttgtagattgattactgataagacagctcaagcgagtctagcctgagatataaaaccacactagccaataaaaaaggtagccaaacaaaactagggagttttcatccaggcgaacaagtagaaagagcttacttggtagtggggagctctttctgcattatctgttttagcagctcttatttctattgagtgctcaactagctcttaaacattaaaaaggatacttatccagaaaggtcagttgccccttacttttactgacagaacataacaaccactgatgattttattttattttagtatttttcaccaaataatactaaagataatgttcttcacctagcataacttcctcatgaaacttttaacttaatactccatctggttgcaaaaacatgtttcggacatctctcaattcaaactttgaaaattttaaacatcaatatcattttaattatttaaaaaggatgcaggcaaaccatatgtatatattttgttgggctttacagatgtcttagttgtagaagttgtattatgaagatcatgttggtgtccaacatgacattttttttatggtagaggtaattattagatttgtagtgtacgtaactctataatagatagtgtaatgttgatttctttagattgtatcacctgtgcactatcatataatgatgatgctaaaaaggttcagattcgcacgcaaatctgttttgtggttaatgatgaagtgatggaaatttggtaaaccataatagacatacgagcatacgactatatgagctgttgtattgtatcattagatcaaaattccaacttatggtatgctttggtgaagtatcaatattttatttctgttcctttttgttttattagaaccgtacttgttctttagcagtgatttgaataaaattgcacacggatgttttttattaggactaagattagataagacatatggggtagtttgaatggagaaaggtggagcaatgttatgttgtttgaataagatgcagccaggcgcaatagtaaaatttcaggaacaaaacaagatgcaaacataggaaaggtttaagaggtcaacataagttgttccatgaaaaacttctctttaacaatgtatcatctccctagctatgtatctgtacgtatgctactttctgtgcaatttagggagggattttagaaagattttgcttccattgacaaatccaaaaactgaacatatatatggaactccataaggttgagttcaaatttgatttttctgtaaacaagatagacatacattttcttctgatgtatgagattccactgtctgtccatcatactgaaagagcctagtgcttaccactcggatagcttaaggttagtaaatcaacgaaacattaatggaactagaagtttgagacaacaaagcattagtgcaaaattacaaatattttgagataatggtcatgattacagatttaagatgctctattgcatatcttaatttgtaacaagtttggtgctaaatatgtagatctgtgatacttcgtgttgaatctgtagttatgtcaaaatatatgtggttttgctaaatttatctttatatttatgtcattcaaatgcaatcccaaaggttattctttctcttgacatccgcaaagagaacttgttactggttactggctactggctactggctactgaaaagattatctttcttgtggctactggctactagcaagctaacttgcagctaaaattaatagttcctgtgcacagctctgtgttcagggagatgaagaaatatcagaaggacttttcgggctggtgtggtgaatgtaaacgtgagaagaaggagaggcagattcatgctgttaaagcaactaagctggtaaattatcatttctccaaaacctgtacagtacatgtcgctgttaactccatgttcaattcttagatgtcttttgttttgttttctggttttttgtttgatcaggcgtttcttaggggtgctggaggggcaacgatttaaattatatttgctttatgtatttatacaatcttgtattatattatactttactgtcatttgggaagcagctagtgtgatcttcagtttttctggtcacaatcattagtggtcacaggtgtatgtaaattgaacttgtgatcaaatcaagctgaaacttagtggaggatcgcatgttagtgtgaaaggagtgctagcagaatagcaactccccccttcaatatcgtctaagcctgatattgtacagataagtgcatctgcatagaatgttctaatctgtcatcaaatttgggtgatgcaaccttttat</dnaseqindica> 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| External Link(s) |
