Difference between revisions of "Os01g0546000"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os01g0546000| Description = Protein kinase domain containing protein| Version = NM_001185476.1 GI:297720086 GeneID:9267920| Length = 2725 bp| D...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0546000|
 
GeneName = Os01g0546000|

Revision as of 18:52, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0546000

Description

Protein kinase domain containing protein

Version

NM_001185476.1 GI:297720086 GeneID:9267920

Length

2725 bp

Definition

Oryza sativa Japonica Group Os01g0546000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:21941787..21944511

Sequence Coding Region

21943702..21943830,21943958..21944056,21944146..21944310

Expression

GEO Profiles:Os01g0546000

Genome Context

<gbrowseImage1> name=NC_008394:21941787..21944511 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:21941787..21944511 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgactaccaaatccgatgtgtatgcattcggagtagttcttgcagagcttattactggtctccgtgcacttgtacgggacaacaaggaagctaacaagacaaaatctctaatctcaatcgtaagatctatgaggaaagcattcaaaccagaagatctggagagttccctggagacaattgtagatccctacctgaaggacaattaccccatagaagaagtttgcaagttggcaaacatttcgatgtggtgcctcagtgaggatccactgcaccgccctgaaatgagggaggttatgccgattttggctcaaattcatatggcttccatagagtgggaagcatcactcggaggcgatggtgaagtcttcagtggcgtttccaatggtagatga</cdnaseq>

Protein Sequence

<aaseq>MTTKSDVYAFGVVLAELITGLRALVRDNKEANKTKSLISIVRSM RKAFKPEDLESSLETIVDPYLKDNYPIEEVCKLANISMWCLSEDPLHRPEMREVMPIL AQIHMASIEWEASLGGDGEVFSGVSNGR</aaseq>

Gene Sequence

<dnaseqindica>1916..2044#2172..2270#2360..2524#ttgtcttatgcagttcaggatggagataccttgggcaacatcgcaagcttgttcagatcgagttggaaagatatcttggatttgaacccaagagtcgcaaatcctgatttcataaagccaggatggatcttgtttatcccgatgggagttgctggtccttctaacaagagtgagtcactgtttcttttcaactgatgtttttatttatttattttctgcagtactgaaaactgatacataaggcttcatgagaacaagtataaatggtactgtggacatgatattagatttagtgagacacaataagcagatggctccacgattgctcttcaagtttacaaaccgaagctaattttcttttgatcacaggatctcaactactgtgaaatttgtgtgtactactttttgctcctttctaactggatgctgaacctttgcatctcctttctttgtttgatgattttagaggttcgtggcttaccaatcataatagcagcatccatatcagttgccatgttgctcctatgtgtgttaaccatcatactttgcctgaaaaggagatctactctgcccagtgttgaagcaccagcgcataaaatggagaaaattcccagtaatacaagcattgctgcactggagagtcgtttctatccatccatgagaatcaatggtcttgttcttctacctttattcgtgtttttagtaaaaatacatccttattaatattattgagttgattggttgcagaaattgatccattccaaacagagaggcctgtgattttcagcttgagagcaattgaagatgctacatctaattttgatgagaagaggaagattggtgagggaggatatggaagtgtctacctcggtttcataggaacacacgtaagaagtttctaaagtatcttgcaaaggttactataatcacaaagcagtattagatgatcatatccctattcgaaattgggaccttcattgcaggaaatagcagtcaagaagatgaaagcaagcaaatcaaaggagttctttgctgagttgaaagtgctgtgcaaaatacatcacataaatgtggtacgtagttagttaccaggagggaggtgatgattgatggaatgattttttgttttctcaaacacatgattgatgtaatgtgaagaaagtttttctttaacattttcaattctattttacataggttgaattgattggttatgctgctggggatgatcatctttacctcgtttatgagtatgtccagaatggatcgcttagtgaacatctccatgatcctttgctgaaaggtatgtattaaaatgagaaccagcattttattttgaggtaacaattgttattgatgttccaaaagcaaactatatatttggtaaaacttgcagaattatcaatggagcacctgtttctcatattacatgagcatgtgtgttgcccttatttaagacttacatcaactctctttcatgtgatatttataggccaccaacctctatcatggactgcaagaacacagatagcaatggactctgcacgtggtattgaatacatccatgatcatacaaagacctgctatgtgcaccgtgacatcaaaaccagcaatattctgctagacaatggtctacgagctaaagtgagcccatgcaaaacccatcaattttcaggtatgtctgctcagatattccatctgtttgattatcttttgtttaacaggttgcagatttcggcttggtcaagctcgttcagcgtagtgatgaagatgaatgtctggcaactcgtttggttggaacgccaggctaccttccaccagagttagttttgatttacatctacttgagatgatggtgtttcacatgtagtagcactaatatcattaatcctgcagatcagttcttgagcttcacatgactaccaaatccgatgtgtatgcattcggagtagttcttgcagagcttattactggtctccgtgcacttgtacgggacaacaaggaagctaacaagacaaaatctctaatctcaatcgtaagatctgttgcagccagttttgaatgtttcagcagaattgttgtttctccgattggcacactgatctttacccaagtgtgctcaatatatatttaatgaaatcaaaggatcaaattggccattttgtggacagatgaggaaagcattcaaaccagaagatctggagagttccctggagacaattgtagatccctacctgaaggacaattaccccatagaagaagtttgcaaggttagaaacactgaaagtttgcattcctattgattcagtaaccatcccagttaattgaccgataataagtttttttttttgtgatttagttggcaaacatttcgatgtggtgcctcagtgaggatccactgcaccgccctgaaatgagggaggttatgccgattttggctcaaattcatatggcttccatagagtgggaagcatcactcggaggcgatggtgaagtcttcagtggcgtttccaatggtagatgatggagcagcattgctttggtaattggtacagagaagaatgcactccttgtttttattaatttggagagctatttgttgtagtgcattttgggaatttatatactgtgttcctcactaactgttgatgtaatatgtttatattggacactccctttccaagcagtttcagtagcgaccaaattagtcatcaaattctttaaa</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0546000, RefSeq:Os01g0546000