Difference between revisions of "Os01g0549400"
(Created page with "{{JaponicaGene|
GeneName = Os01g0549400|
Description = Similar to RNA helicase-like protein DB10|
Version = NM_001049830.1 GI:115437435 GeneID:4326190|
Length = 5717 bp|
...") |
|||
| Line 1: | Line 1: | ||
| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os01g0549400| | GeneName = Os01g0549400| | ||
Revision as of 18:52, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os01g0549400 |
|---|---|
| Description |
Similar to RNA helicase-like protein DB10 |
| Version |
NM_001049830.1 GI:115437435 GeneID:4326190 |
| Length |
5717 bp |
| Definition |
Oryza sativa Japonica Group Os01g0549400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:22179292..22185008 |
| Sequence Coding Region |
22179403..22179825,22179948..22180016,22180939..22181208,22181469..22181819,22181986..22182263 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:22179292..22185008 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:22179292..22185008 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgtcggcagggaccgccccggccgcgccgcggtacgcgccggacgacccgtcgctccccaagccgtggcgcgggctcgtcgacggcaccaccggctacctctactactggaacccggagaccaacatcacccagtacgagaagccgctgccgcccgaggaccagctcccgccgcccccgccgctccccccgccgcctccccgctccggccgaggcgaccgagaccgcgaccgccgcgaccgctcccgatcccgcaccccgccgcggcgcgaccaccgggaccgcgaccgggaccgcgacaggcgccacgacgaccacaggtcggcgccttcccaccaccatcctcttccggccgccgccgccatcgccgccgatgatccctccaccgaggcgtatcgccaccgccacgagatcaccgttgtcggggacaacgtgccagctccgataacttcgtttgagactggtggattcccaccggaaatcctcaaggagatacaacgtgctggattctcaagtccaacgccaatccaagctcagtcatggccaattgccttgcagtgtcaagatgttgtagctattgcaaagacaggatctggaaaaactcttgggtatctacttcctggatttatgcatattaaacgcttgcaaaacaacccaaggtctggtccaacagtgctagttttggcaccgacaagggagcttgcaactcagattttggaagaagctgtgaaatttggcagatcatcaagaatttcttccacgtgtctatatggtggtgctccaaaaggcccccagctaagagatttggatagaggggtcgatgtcgttgttgctacaccaggaaggttgaatgacatcctagaaatgcgaaggataagccttaagcaagtgtcgtaccttgttctagatgaagctgaccgtatgttggacatgggatttgaaccacaaattcggaagatagtgaaagaaattcctcctcgtcggcaaaccctcatgtacactgctacttggcctaaggaagtccgacgaattgcagaggatcttcttgttcaccctgtccaggtgaccattggaagtgttgatgagcttgttgctaatagtgctattactcagaatgtggagctgatcacaccgtccgaaaagcttcgccgtctggagcaaattttgcgatcccaggattcaggttcgaaggtactaatattctgtaccactaagagaatgtgcgaccaacttgcaaggacacttactaggcaatttggagcttctgccattcatggtgataagtcccaaagtgaaagagagaaggtcctgagccattttagatctgggcgatctcctattttggttgcaacagatgttgctgcacgaggcttagacatcaaagatatcagggttgtgatcaattatgatttccccactggcattgaagattatgttcaccggattggcaggactggaagggctggtgccactggtgtggcctatacgtttttctgtgaccaggattcaaaatatgctgctgatcttattaaaattctggaaggcgcaaaccaacgtgtgcctcgtgacttggcggacatggcctctcggggtgggcgtggtggtaggaagcgtaaccggtgggcaacccgctctgataggggtggttcgcattctgaactggattctaggtatggtggaagagatggtctgtcagggtcttctggcagattggatagtagtcgcagtagtcgcaggcatgactatggtgatgatggacggtctcgcaggtctgggagaggtcgcagtaggagccgtagcagaagtgacagtgataggtatagccgaagtcctaagaggtcacgccgtcatagccgtagcaggaccaggagtcggagccgaagcaggagcaggagctacactaggaaccgtcgtgctagccgcagcaggagccgtagccctggtgctagccgtaggcatgaaagaagcgctactggctctgggtctgcactgccagactctgggcacggtgagcgcaaaagaacaccagaagctgacccatcaagaaaccatacaaaccactcagacccgaaagatgaccgacacccagaggatgggaaggtgggaaaggttgatctcgatcggtcgcctactccacaagacaagtctggcccatatagtcctgcttacaatggaaaaaccagtcgctcagtgagccctggtaatcaggtggaaggaaacaacaaagctgcggaggtttctaagaatcctgatccttcatcgccaccccatcatggtaagaccagggaggacgaagaggaaggtatgatagatgaagatggagagatagctgatgatcctcgggcaaatgcaaccgtgcagaatggcggtgataattga</cdnaseq> |
| Protein Sequence |
<aaseq>MSAGTAPAAPRYAPDDPSLPKPWRGLVDGTTGYLYYWNPETNIT QYEKPLPPEDQLPPPPPLPPPPPRSGRGDRDRDRRDRSRSRTPPRRDHRDRDRDRDRR HDDHRSAPSHHHPLPAAAAIAADDPSTEAYRHRHEITVVGDNVPAPITSFETGGFPPE ILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKTLGYLLPGFMHIKRLQNN PRSGPTVLVLAPTRELATQILEEAVKFGRSSRISSTCLYGGAPKGPQLRDLDRGVDVV VATPGRLNDILEMRRISLKQVSYLVLDEADRMLDMGFEPQIRKIVKEIPPRRQTLMYT ATWPKEVRRIAEDLLVHPVQVTIGSVDELVANSAITQNVELITPSEKLRRLEQILRSQ DSGSKVLIFCTTKRMCDQLARTLTRQFGASAIHGDKSQSEREKVLSHFRSGRSPILVA TDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVAYTFFCDQDSKYAAD LIKILEGANQRVPRDLADMASRGGRGGRKRNRWATRSDRGGSHSELDSRYGGRDGLSG SSGRLDSSRSSRRHDYGDDGRSRRSGRGRSRSRSRSDSDRYSRSPKRSRRHSRSRTRS RSRSRSRSYTRNRRASRSRSRSPGASRRHERSATGSGSALPDSGHGERKRTPEADPSR NHTNHSDPKDDRHPEDGKVGKVDLDRSPTPQDKSGPYSPAYNGKTSRSVSPGNQVEGN NKAAEVSKNPDPSSPPHHGKTREDEEEGMIDEDGEIADDPRANATVQNGGDN</aaseq> |
| Gene Sequence |
<dnaseqindica>112..534#657..725#1648..1917#2178..2528#2695..2972#4199..4543#4790..5432#agggctacagaagaaaacccgaaaccctcgccttctccctccccggcgccgccgccgccgccgcactaatccgccggagaccgggagatcgggccagatccgccggtggagatgtcggcagggaccgccccggccgcgccgcggtacgcgccggacgacccgtcgctccccaagccgtggcgcgggctcgtcgacggcaccaccggctacctctactactggaacccggagaccaacatcacccagtacgagaagccgctgccgcccgaggaccagctcccgccgcccccgccgctccccccgccgcctccccgctccggccgaggcgaccgagaccgcgaccgccgcgaccgctcccgatcccgcaccccgccgcggcgcgaccaccgggaccgcgaccgggaccgcgacaggcgccacgacgaccacaggtcggcgccttcccaccaccatcctcttccggccgccgccgccatcgccgccgatgatccctccaccgaggcgtatcgccaccgccacgagatcaccgttgtcgtaaggatctaacaactgtttgttacatcccgatgtttgtttattgtttacttactaagtacctaatttttgtttaattactaagtacctaatttttgggttggttggcgtccatggtgcagggggacaacgtgccagctccgataacttcgtttgagactggtggattcccaccggaaatcctcaaggaggtatgcaccatctgcttgggtgatgaatcctaacacatggcctaaccactaacacaaaaacggagttgcctatacttactagttcggcgagcgtgattacacagacttgtttctccttatttgcttgcttgatccttgactgtgctaaatcagagccggctgcgggtttcaattatttatctacatctctgtggcagatgcgatatttgctccaaaggtggagcgaatgtcgtacgctgcctcgcgcacccctcggccaaataagagcggcgggctgagggaagatgtcgttgatggagttgatagagttgctaagggtgggtgaacacccgaggcggctcacccctggctctctctcactccctaccgagggactgcccatggcgcaaaggggcaccccatgtggcggctcaaccttggcttgctcgcgcttcccgccgagggattgcccatggcgcaaaggggcacccatggcggctgatttgttgctctgcatccaatccctggagaaggctcctcacatggatggtgggcctcttctggggcctggccatggaggtcgcaccgtccataggacctgcgggcagctgctggaggggcttcgcacccaggctgtcaacgtccatacataggacctggacctgcgggcagctgctgaaggggtcctgtggatgaacgatccatggttgagcgaggctgcctccagggatgctgttagagccttttctacttcaccttgcgcatgcaagtcaacacatcttggatgcactttcttttgtacgatatcttaagttggactcatgcactgttgattctttgtttctactactaaagttttggagggaaattatagctacatatttacgatatccttatccttatccttattgtgtctgcttttgccatttccccttgttttcagatacaacgtgctggattctcaagtccaacgccaatccaagctcagtcatggccaattgccttgcagtgtcaagatgttgtagctattgcaaagacaggatctggaaaaactcttgggtatctacttcctggatttatgcatattaaacgcttgcaaaacaacccaaggtctggtccaacagtgctagttttggcaccgacaagggagcttgcaactcagattttggaagaagctgtgaaatttggcagatcatcaagaatttcttccacggtcagttcattctactatgatacatatgttattgttgggctactggcataaaacagtattagataatagatacacaggtttaattggctttatgttttgttactttgataaaccctattgaccatctaaaaaggattttcaaacatcatacaaatgcagatgtgctacctagtttccaaagcttgtttatcaattaagatctttgtctttatcttgccttgttttggattattatatgatgtttgtttatctgtttttagtgtctatatggtggtgctccaaaaggcccccagctaagagatttggatagaggggtcgatgtcgttgttgctacaccaggaaggttgaatgacatcctagaaatgcgaaggataagccttaagcaagtgtcgtaccttgttctagatgaagctgaccgtatgttggacatgggatttgaaccacaaattcggaagatagtgaaagaaattcctcctcgtcggcaaaccctcatgtacactgctacttggcctaaggaagtccgacgaattgcagaggatcttcttgttcaccctgtccaggtgaccattggaagtgttgatgagcttgttgctaatagtgctattactcaggtttgttccttaactgatgggctccattaatgatacttcaagatccttttgtttcctctcatcagttcctttggataagaaaaacagttggtactatttgaatgtacggtttcaccaaaaaaatcccatccttaagaagttactataattctctttttcttggcagaatgtggagctgatcacaccgtccgaaaagcttcgccgtctggagcaaattttgcgatcccaggattcaggttcgaaggtactaatattctgtaccactaagagaatgtgcgaccaacttgcaaggacacttactaggcaatttggagcttctgccattcatggtgataagtcccaaagtgaaagagagaaggtcctgagccattttagatctgggcgatctcctattttggttgcaacagatgttgctgcacgaggcttagacatcaaagatatcaggtactccatccgttcttttctggatgtttttgttctcaaatagatgtcctttttagcctttataggcagtgtttcctaacttaccccctagtagaagcgctggttcaataaatggaattatccttattcaactcaactattgccactactagcatgtttgcaagattaattaatatggtatttgctccaaccaaaaaaaacagcagctagcatagcactttgcttggctgtgcagtgaggtgctggttgtctgtgctatgtctatgaaatcgaccgatggcaggattggacaagtactttatactgctattaattagagatgatatagtgataaaaaaggttaattattccttggtcattgtgctttagcctaaatgatgtgtaattctgaatgaagggagcatcatttcaaagttttgttgatatgatattatactattttcattaaaaagtggaagcagattcctttggttctgtcatgtgcttataagaccaaagcacattgacacaccaaacttggagagtatttaaaattccttcagtcaattaatagggcaaagttgtctgtacagtaaggttttaaatataattgaagtgctcactattggttgtattatactccatccaaaagtctaagacctattccattctttggttttttctaaaaatctaagtcctatttgtagtcattattagttgcatgtttattggttttgtcacatggtgagtgagttaattgctccttggtcttggtgcaaaaagaaataggtcttagacttttggatggagggagtatctgggaaaatatactgattgaagttttcctgcatccactgtatgctgatgcaagtgtatatgtaatcttgggagcatagcattttgatcaacatagtttttagctttgttttggtattctagggcttgttcagtttggtgccaaaatcagcctaccaaaatttgacatcgccaaatgttggcatatattgacgttaccaaattttggtagcgttggatgcgtttagtttgtagccttaccaaaatttgatagtgtttttttgagaggaagttttgggaaataccaaaatttggtagggtgtcaatggcaatagaatgtttggtttgttaccttacaagttttggtaattgcacatttacatttgtacctatgtgcatcacgtgttgacgtttacattttaattgaattgacttctgtttcattggcacagggttgtgatcaattatgatttccccactggcattgaagattatgttcaccggattggcaggactggaagggctggtgccactggtgtggcctatacgtttttctgtgaccaggattcaaaatatgctgctgatcttattaaaattctggaaggcgcaaaccaacgtgtgcctcgtgacttggcggacatggcctctcggggtgggcgtggtggtaggaagcgtaaccggtgggcaacccgctctgataggggtggttcgcattctgaactggattctaggtatggtggaagagatggtctgtcagggtcttctggcagattggatagtagtcgcagtagtcgcaggtattttcgctttcacctctttctttttgaacactaattatcagtatcttttgtacacatgttatatgaagacattagtttcttttttgacagattcgaaacaagtttgacgaaattgttgatgaaacactttaaggatctaggtctcattagtttattagaagacctgatctgtggatttgctttatttagttgactgcagtattgcgcctgaatcttattattgagtttttctgcttttgacaggcatgactatggtgatgatggacggtctcgcaggtctgggagaggtcgcagtaggagccgtagcagaagtgacagtgataggtatagccgaagtcctaagaggtcacgccgtcatagccgtagcaggaccaggagtcggagccgaagcaggagcaggagctacactaggaaccgtcgtgctagccgcagcaggagccgtagccctggtgctagccgtaggcatgaaagaagcgctactggctctgggtctgcactgccagactctgggcacggtgagcgcaaaagaacaccagaagctgacccatcaagaaaccatacaaaccactcagacccgaaagatgaccgacacccagaggatgggaaggtgggaaaggttgatctcgatcggtcgcctactccacaagacaagtctggcccatatagtcctgcttacaatggaaaaaccagtcgctcagtgagccctggtaatcaggtggaaggaaacaacaaagctgcggaggtttctaagaatcctgatccttcatcgccaccccatcatggtaagaccagggaggacgaagaggaaggtatgatagatgaagatggagagatagctgatgatcctcgggcaaatgcaaccgtgcagaatggcggtgataattgactctttggtcccaaaagaatttaacaaactgctgagcagccactacagatgatctgcgtgacaaagctcaaaatgttaaaaattgtctgaagctgtcttttcgtagtcaaaacttaagttatgaaactatccgtgtcgtagagagctggagattgttttgtgcctgagttgtcttataacattatatactttgtagaccctgtcgaagtagatcatgtgaagtgaagttggtagctctgttatttgtgaaccaataccggaggtgcaaatcatgcaagattatgc</dnaseqindica> |
| External Link(s) |
