Difference between revisions of "Os01g0585700"

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(Created page with "{{JaponicaGene| GeneName = Os01g0585700| Description = SIT4 phosphatase-associated protein family protein| Version = NM_001049962.1 GI:115437975 GeneID:4327657| Length = 3...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0585700|
 
GeneName = Os01g0585700|

Revision as of 18:53, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0585700

Description

SIT4 phosphatase-associated protein family protein

Version

NM_001049962.1 GI:115437975 GeneID:4327657

Length

3572 bp

Definition

Oryza sativa Japonica Group Os01g0585700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:24435957..24439528

Sequence Coding Region

24435959..24436009,24436851..24436954,24437035..24437200,24437272..24437394,24437498..24437580
,24437678..24437819,24438069..24438098,24438322..24438392,24438477..24439068

Expression

GEO Profiles:Os01g0585700

Genome Context

<gbrowseImage1> name=NC_008394:24435957..24439528 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:24435957..24439528 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cctacgacatatggatgtttacgcccaccccttggaaaacatcgtttgaagattgtggagttcatctcagttctgctgacaattggcagtgaaactgctgagaaagagcttatcaggcaatcggcaataaagcgatctgttgatttattcttcgagtacccatataacaattttttgcaccatcatgttgagaatattattgtctcttgcctggagggtaaaagaactgaacttgttgagcatgttcttaatgactgtgacattgttggtaaaattcttgccgcggaaaaactttcttctttgtcaacagagtctactgggcctactataccttcagatggtaaatcgattcccaaaattgggaatattggtcacatgacaagaataaccaacaagcttattcagttgggaagcagtaacggcacaatccagattcacttgcaggaaaatagtgagtgggttgactggcaaacagatgttctagtcaagcgtaatgaggtggagaatgtttatcattgggcttgtgggcgcccaacatcacttcatgaccgtggtagggatagtgatgatgatgacttccgagacagggattatgatgtggcagctcttgctaataacttgagccaggcattccgatatgggatatatagcaatgatgatatggaagagaatcaagggacacttgaacgggatgatgaggatgtctattttgatgatgaatcagcagaggtcgtaatatcttcactgcgactgggagatgatcaggatggttccctctttacaaattcgaattggtttacatttgatggagagagaggtattactgaccgtttggctgcggttccttcgtcttcacctaattcagaggagatttccccagacactgaggaaactgatgatggtgaagtcgtcattggtactgaggatcatatggatactgtcaatcttgggaatggtcctatcgaggaggcagaagatgcagcggaatttactaaacacccggctactagcacggaggatgagcaactacaaaacgctgaagggattgagcgacacctggatgtttcaaatggtgatgctgaagctagtacagaagctgcagaggcagcaccagtatcttcagccccatcttctgatgaggtgcagacagagagaactgcagatgaacccactggctcatctgattcgggtaattctgtctcagaagttttgccagatcctgaagatagtagcattgatccagccaacacagcagtatcgtctgaacaaactgtggataacgaagacgtggagttaccaactaaggaagttccgtctgtggatgttgaaactaaaaccgatgaaatcaaagcaaatgagtga</cdnaseq>

Protein Sequence

<aaseq>PTTYGCLRPPLGKHRLKIVEFISVLLTIGSETAEKELIRQSAIK RSVDLFFEYPYNNFLHHHVENIIVSCLEGKRTELVEHVLNDCDIVGKILAAEKLSSLS TESTGPTIPSDGKSIPKIGNIGHMTRITNKLIQLGSSNGTIQIHLQENSEWVDWQTDV LVKRNEVENVYHWACGRPTSLHDRGRDSDDDDFRDRDYDVAALANNLSQAFRYGIYSN DDMEENQGTLERDDEDVYFDDESAEVVISSLRLGDDQDGSLFTNSNWFTFDGERGITD RLAAVPSSSPNSEEISPDTEETDDGEVVIGTEDHMDTVNLGNGPIEEAEDAAEFTKHP ATSTEDEQLQNAEGIERHLDVSNGDAEASTEAAEAAPVSSAPSSDEVQTERTADEPTG SSDSGNSVSEVLPDPEDSSIDPANTAVSSEQTVDNEDVELPTKEVPSVDVETKTDEIK ANE</aaseq>

Gene Sequence

<dnaseqindica>3..53#895..998#1079..1244#1316..1438#1542..1624#1722..1863#2113..2142#2366..2436#2521..3112#tgcctacgacatatggatgtttacgcccaccccttggaaaacatcgtttgaaggtactggatgatgcaatgctcatttacaaattacaactgaccatttatccatttctgcattcaatgattatttcttgttctgtacaaagtcatttgcttaatggatggatctatgcatttaataaacatatttaaattgcctagatttgtttaggtttagtcattttgttttgtagatttcagtctcggaccagatggagtacagaaaagaagggacccaggacctgtgccagtctggtccacctaattggattgggtctggtaaacctaattggattggtgctgcaattggcccagcagattgggcgtcccagtatgatagaatgtgtgactcgaaccgtttaaggccatttaaccaattaattcacagaaatgatgttgccgccagggattgaactcacggtctacagctacggcatttacacctaaactagttgagcctagctcatttcttggtttgcaggagtgtatatttcaatatatagaacatatcaatagtttttcattataaaataaaaggaaacgtggttcgtccgatgacctgataatctgatcatttacctggtgcccgtggctgggtcattcactaggctgccctcataagactgagttttggtatgttcatcaattcatttcgggtgagataggaatatccaagaaaacagagattcatgcatgctcgagtccttatgacatcaagtgttcttttgtcattaacctttatctgcagtgtataactcttcattctttttaattttggcattgaaattctgtcttggtgattgtcgttacttttttttgggtgcaattgtactaagctggatttattcttcccccctagattgtggagttcatctcagttctgctgacaattggcagtgaaactgctgagaaagagcttatcaggcaatcggcaataaagcgatctgttgatttattcttcgagtaagtccaatatttttttttcgagaaaattcgtttgtttccttggtctaatggccctttcatacaattctgaactgcaggtacccatataacaattttttgcaccatcatgttgagaatattattgtctcttgcctggagggtaaaagaactgaacttgttgagcatgttcttaatgactgtgacattgttggtaaaattcttgccgcggaaaaactttcttctttgtcaacagagtctactggggtaagttgttaacagtctgtggtaattttggatgtaataatccccttacatcatttttgtcttgtgtgtagcctactataccttcagatggtaaatcgattcccaaaattgggaatattggtcacatgacaagaataaccaacaagcttattcagttgggaagcagtaacggcacaatccagattcacttgcaggtgatatttcctttctttccattgactcaacagtctttaattttttgaactatgaagtacctgagttctctgctcactgtctcgaattattttttaacaataggaaaatagtgagtgggttgactggcaaacagatgttctagtcaagcgtaatgaggtggagaatgtttatcattgggcttgtgggtatgtgactgtttctttttttgattgcatgctaaacttgcatgtcttgcttctgttttttcactgaatagtttatctatatgtcttgttgctgcaggcgcccaacatcacttcatgaccgtggtagggatagtgatgatgatgacttccgagacagggattatgatgtggcagctcttgctaataacttgagccaggcattccgatatgggatatatagcaatgatgatatggaagaggtgtgtgttttgaatgattttgtttctcttgctttgatggtttgcgtcagtcaacatgtttctctgccagcacattttgttaggtttaatttgagaggattctatggtggataaaatatcattctgttactcgtgctatatattatctacttgagtgactcaccagctctaaccatgttccagttttgcagttccttaaagccttactataccagatactaatgatacttgtttgtttcttgaatgcagaatcaagggacacttgaacgggatgatgaggtatatttaaggatgctagtttacccccatttattgcttttttgttcttttcacctggtattaagttcaatttgattaaaattcagtatagttcctaaatgcttgcttcaatcaaccatgtaaaaagaacagaatgttgcatgcggataatatagtgtctagaaccatatttgttgaagctgtacttttgagtgagtggatttccattgttttctcctttcaggatgtctattttgatgatgaatcagcagaggtcgtaatatcttcactgcgactgggagatgatcaggatgggtaatttgtgatcttaaaacatactttggtatctttggtttttttgtccttgggctaattatgtgtttatgtatttaaaagcagttccctctttacaaattcgaattggtttacatttgatggagagagaggtattactgaccgtttggctgcggttccttcgtcttcacctaattcagaggagatttccccagacactgaggaaactgatgatggtgaagtcgtcattggtactgaggatcatatggatactgtcaatcttgggaatggtcctatcgaggaggcagaagatgcagcggaatttactaaacacccggctactagcacggaggatgagcaactacaaaacgctgaagggattgagcgacacctggatgtttcaaatggtgatgctgaagctagtacagaagctgcagaggcagcaccagtatcttcagccccatcttctgatgaggtgcagacagagagaactgcagatgaacccactggctcatctgattcgggtaattctgtctcagaagttttgccagatcctgaagatagtagcattgatccagccaacacagcagtatcgtctgaacaaactgtggataacgaagacgtggagttaccaactaaggaagttccgtctgtggatgttgaaactaaaaccgatgaaatcaaagcaaatgagtgaaggggcaggaaatctcatgggctaaaatggcatagttgaccagaacagttgttagtcagatcggtcagaaagacaagcaagcctcacctgctcatcaggcatggacatgtccgaagcaaactgctgtacaataaaaagagtgtactatttttgccatccattgtggtctatccctgtacaaaaatgatcaccatcatctaaccgcacgctcgtcatcgcaacatctgaaactggtcaaaatttgtttcaagttcgcctccagttcatgggaaaaataggttggtgccaaacgtcatttgtcagttagtctctgtgtcgtgtcttgatatatggaaaagaacattctttggatggcagctagttttgtcaacgtggtcttttgtttccttttaggtttaacactttgaactgtaatatgggatgtgctatttatttatagcctagctattatttgtaattt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0585700, RefSeq:Os01g0585700