Difference between revisions of "Os01g0596000"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os01g0596000| Description = Cyclin-like F-box domain containing protein| Version = NM_001050009.1 GI:115438167 GeneID:4325953| Length = 1707 bp|...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0596000|
 
GeneName = Os01g0596000|

Revision as of 18:53, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0596000

Description

Cyclin-like F-box domain containing protein

Version

NM_001050009.1 GI:115438167 GeneID:4325953

Length

1707 bp

Definition

Oryza sativa Japonica Group Os01g0596000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:25017472..25019178

Sequence Coding Region

25017472..25018440,25018546..25018692,25018783..25019178

Expression

GEO Profiles:Os01g0596000

Genome Context

<gbrowseImage1> name=NC_008394:25017472..25019178 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:25017472..25019178 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgatggacacgatcctccacttggtctactcctccctccccgaaaatcccgtctcccccaccgccaccctctccgccgccttcacttcctcctcatccgccgggggcggcggcgaggatcgcatcagcgccctccccgacgacctcctccgccacatcgtctcccgcctccccaccaaggatgccgcccgcaccaccgcgctctcctcccgctggcgcggaatctggcgctccacccctctcgtcctcatcgacggcgacctcttcccgcaggggccgcacatctccgccgccgccggcgcgtccctccgcagcatcagggacgctgtcgcgaacgccgtgacgcgcgtcctcgcctcccacccgggtcccctccgcttcgtcggcgtcatcaacttcttcctgggccggcacgtcgacgcgctcgcggactggctccgcctcctcgcggccaagggcgtcgaggacctcgtgctcgtcaaccgcccgtggccgctcgacgtgagaatcccggacaccatcctccgctgcgcctccctccgccgcctctacctgggcgtcttccgcttcccggacaccaccggccacccacgcggccccgacgtcttcccccacctccaggagcttggcatctgccacaccatcatggatgacggggacctcgaccacgtgctcgcctgctgccccgcgctggagaagctcgcgctcgtcgccggctacggcaccccctcgcgcgtccgcgtcgagagccgccacagcctccggtgcgttctgctctggtggtccatgatcgacgagctcgccatcgtcgacgccccgtgtctagagcggctcatcctctgggggacgtacccctgcgaggaagaacccatcaagatcgagataggctacgctccgcagctcaccgtgctcggttacttggacatgggcatccacgcgcttcatatcggcggcatgattatcaaggctggggtgacggatgtgagcccgatggcaaaagttcctagtgtgaagatattgggcataaatgtgaattttgaagcccgcaaggaaatggagattttgcccagtttcttgagatgctttcccaatgttgaggcacttcatataaagtataatgtggatgagtccaatggcgagctcaactccaagttctggcaggaggttgggcatatagaatgcgtggagtcgagcatcaagaaggtggtgttcgatcagttcagagggggtgccaacgagctcgaattcatcaaattcattctggagagggctcaaatgctggacaagatggtgtttgtcgtggatcctgagaattcggcttttgtggatcaggccatgagcacaatgaagtcactagcttccacagactataccagtgccagtaagaagtgttcactgatgatggttggatatagaaaaggtcctcccgcgttcagctacatgagagcatctgatctttctctgagtgacccattctttgtttcgaaggatatacaagtgaccgtttaa</cdnaseq>

Protein Sequence

<aaseq>MTMDTILHLVYSSLPENPVSPTATLSAAFTSSSSAGGGGEDRIS ALPDDLLRHIVSRLPTKDAARTTALSSRWRGIWRSTPLVLIDGDLFPQGPHISAAAGA SLRSIRDAVANAVTRVLASHPGPLRFVGVINFFLGRHVDALADWLRLLAAKGVEDLVL VNRPWPLDVRIPDTILRCASLRRLYLGVFRFPDTTGHPRGPDVFPHLQELGICHTIMD DGDLDHVLACCPALEKLALVAGYGTPSRVRVESRHSLRCVLLWWSMIDELAIVDAPCL ERLILWGTYPCEEEPIKIEIGYAPQLTVLGYLDMGIHALHIGGMIIKAGVTDVSPMAK VPSVKILGINVNFEARKEMEILPSFLRCFPNVEALHIKYNVDESNGELNSKFWQEVGH IECVESSIKKVVFDQFRGGANELEFIKFILERAQMLDKMVFVVDPENSAFVDQAMSTM KSLASTDYTSASKKCSLMMVGYRKGPPAFSYMRASDLSLSDPFFVSKDIQVTV</aaseq>

Gene Sequence

<dnaseqindica>1..969#1075..1221#1312..1707#atgacgatggacacgatcctccacttggtctactcctccctccccgaaaatcccgtctcccccaccgccaccctctccgccgccttcacttcctcctcatccgccgggggcggcggcgaggatcgcatcagcgccctccccgacgacctcctccgccacatcgtctcccgcctccccaccaaggatgccgcccgcaccaccgcgctctcctcccgctggcgcggaatctggcgctccacccctctcgtcctcatcgacggcgacctcttcccgcaggggccgcacatctccgccgccgccggcgcgtccctccgcagcatcagggacgctgtcgcgaacgccgtgacgcgcgtcctcgcctcccacccgggtcccctccgcttcgtcggcgtcatcaacttcttcctgggccggcacgtcgacgcgctcgcggactggctccgcctcctcgcggccaagggcgtcgaggacctcgtgctcgtcaaccgcccgtggccgctcgacgtgagaatcccggacaccatcctccgctgcgcctccctccgccgcctctacctgggcgtcttccgcttcccggacaccaccggccacccacgcggccccgacgtcttcccccacctccaggagcttggcatctgccacaccatcatggatgacggggacctcgaccacgtgctcgcctgctgccccgcgctggagaagctcgcgctcgtcgccggctacggcaccccctcgcgcgtccgcgtcgagagccgccacagcctccggtgcgttctgctctggtggtccatgatcgacgagctcgccatcgtcgacgccccgtgtctagagcggctcatcctctgggggacgtacccctgcgaggaagaacccatcaagatcgagataggctacgctccgcagctcaccgtgctcggttacttggacatgggcatccacgcgcttcatatcggcggcatgattatcaaggttcactctgctcatgataattgtttcctgctgtaatttctttgaattgctggataattcttgatgtggagggttttgtaatcgcgcattgatttgtatttgcaggctggggtgacggatgtgagcccgatggcaaaagttcctagtgtgaagatattgggcataaatgtgaattttgaagcccgcaaggaaatggagattttgcccagtttcttgagatgctttcccaatgttgaggcacttcatataaaggttgttgatatgcatgatcagttcatcactgtgtaaaatctgcagctacatgctccatctttgacttaaccagacgcttgcgttttgcagtataatgtggatgagtccaatggcgagctcaactccaagttctggcaggaggttgggcatatagaatgcgtggagtcgagcatcaagaaggtggtgttcgatcagttcagagggggtgccaacgagctcgaattcatcaaattcattctggagagggctcaaatgctggacaagatggtgtttgtcgtggatcctgagaattcggcttttgtggatcaggccatgagcacaatgaagtcactagcttccacagactataccagtgccagtaagaagtgttcactgatgatggttggatatagaaaaggtcctcccgcgttcagctacatgagagcatctgatctttctctgagtgacccattctttgtttcgaaggatatacaagtgaccgtttaa</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0596000, RefSeq:Os01g0596000