Difference between revisions of "Os01g0618500"

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(Created page with "{{JaponicaGene| GeneName = Os01g0618500| Description = Similar to RNA helicase (Fragment)| Version = NM_001050126.1 GI:115438622 GeneID:4326615| Length = 3258 bp| Definit...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0618500|
 
GeneName = Os01g0618500|

Revision as of 18:54, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0618500

Description

Similar to RNA helicase (Fragment)

Version

NM_001050126.1 GI:115438622 GeneID:4326615

Length

3258 bp

Definition

Oryza sativa Japonica Group Os01g0618500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:26259073..26262330

Sequence Coding Region

26259161..26259384,26259848..26259954,26260054..26260109,26260204..26260410,26260492..26260698
,26260772..26260858,26260944..26261039,26261141..26261356,26261428..26261610
,26261749..26261976

Expression

GEO Profiles:Os01g0618500

Genome Context

<gbrowseImage1> name=NC_008394:26259073..26262330 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:26259073..26262330 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgtctggcggccccagcgacgcgacccaccggaagcggcggcggaggcgggggccgaagggctcgggggtcgacgggccctcgatccccagggcggtcacgaccaacggagcaggtcccgaagaggaggaggtggtggaagggaaggctatggagttggatgcggggatgagcgctgccgaggtgggaggcgtggttggctcgcatctcagcgagacacgatttgatcaatgtcctgtttctccgttgtcattgaaagcaatcaaagatgctggatatgaaaagatgacccaggtgcaggaggcaactctgccaataatccttcaaggtgaagatgttcttgcaaaagcaaagacagggacaggaaaaactgttgcctttttgcttccagccattgaacttctctctacattacctcgttctccatctataaatttgcttgtgatatgccccacaagggagctagcaaaccaagtggctgctgaggccaggaagcttctcaagtatcatcgctcactgggtgtgcaggttgtaattggcggcacaaaattacctcaagaacaacgaagcatgcaatctaatccttgtcagattcttgttgctacaccgggaaggcttaaggatcatcttgagaatacacctggtttttccaaccgaattaaaggggtgaaagttcttgttcttgatgaagctgaccgcctattggatatgggatttagaagagacattgagaaaattattgctttcattcctaaagaacgacagacacttcttttttctgctactgttccagaagaggttcgtcaaatttcgcacattgcaatgaagaggggttacaagttcattaatactgttaaagagggtgatgaggagacacattcacaggtaagtcagatgtacatggttgcaccacttgacctgcacttctctatattgtacaatgtactgaagaagcatatcgcagaagatgcagactacaaagtgattgtattctgtactactgcaatggtcaccaaacttgttgctgaagttctttcccagctgaaactgaatataagagagatccattcgagaaagtcgcaatcagcaagaactaaggtctcagatgaatttaggaaatcaaagggtctgatattagtgagttctgatgtatctgctcgtggtgttgattatcctgatgtcacccttgtcatacaggttgggctgccagctgatagagaacagtatatacatagacttggtagaactggacggaaaggcaaagatgggctaggtctcttactgttggctccctgggaaacatactttctgaatagcgttcaggatttgtctgtatcacaagctgtggtacctacaattgattcgagcattcagacaggagtcaaagatgcactcggaagagtggagacaaagagcaaggaatcagcctaccaggcatggctagggtactacaactcaaacaaggctattagtcgagacaaatccagacttgttaggctcgcagaagagttcagccagagcatgggtcttgcaattccgcctgccatacccaaactcattcttcgaaaaatgggccttaacaatgttcctgggctgcgatctgtgtaa</cdnaseq>

Protein Sequence

<aaseq>MMSGGPSDATHRKRRRRRGPKGSGVDGPSIPRAVTTNGAGPEEE EVVEGKAMELDAGMSAAEVGGVVGSHLSETRFDQCPVSPLSLKAIKDAGYEKMTQVQE ATLPIILQGEDVLAKAKTGTGKTVAFLLPAIELLSTLPRSPSINLLVICPTRELANQV AAEARKLLKYHRSLGVQVVIGGTKLPQEQRSMQSNPCQILVATPGRLKDHLENTPGFS NRIKGVKVLVLDEADRLLDMGFRRDIEKIIAFIPKERQTLLFSATVPEEVRQISHIAM KRGYKFINTVKEGDEETHSQVSQMYMVAPLDLHFSILYNVLKKHIAEDADYKVIVFCT TAMVTKLVAEVLSQLKLNIREIHSRKSQSARTKVSDEFRKSKGLILVSSDVSARGVDY PDVTLVIQVGLPADREQYIHRLGRTGRKGKDGLGLLLLAPWETYFLNSVQDLSVSQAV VPTIDSSIQTGVKDALGRVETKSKESAYQAWLGYYNSNKAISRDKSRLVRLAEEFSQS MGLAIPPAIPKLILRKMGLNNVPGLRSV</aaseq>

Gene Sequence

<dnaseqindica>89..312#776..882#982..1037#1132..1338#1420..1626#1700..1786#1872..1967#2069..2284#2356..2538#2677..2904#agaggcatagcgcgtctttcgaccgttcgccaccgccgccgccgccgcccgcgccgccgacgagatagagatcgttcgccggggagagatgatgtctggcggccccagcgacgcgacccaccggaagcggcggcggaggcgggggccgaagggctcgggggtcgacgggccctcgatccccagggcggtcacgaccaacggagcaggtcccgaagaggaggaggtggtggaagggaaggctatggagttggatgcggggatgagcgctgccgaggtgggaggcgtggttggctcgcatctcagcgagacacggtaaattaatgggccttgttctgcaaattaggttacgaatgtgctttgatttttttttccatttctcaaattgtagaaacttagtatagaatgttctgttgttggtgtgattttgagattataataggcatcgcatagtgttagatagcatgaaatcatagctgttatcagaccgggattagtcttactaatccaccaaattttagttggttgttagttgttactctaaaatcgccatgttcttactaagtcctggtagtagtagtagtagtagtagtattagtagtcagccagtcaatgtccactattcggtgttttcttagatctgttataataaaatcagtttgtgttactcactgtttgttcaaattagtctgtctaccatgacttgtagtttctgaatgtcatgaatcgtgttaggttcctgcaaacttatttaatgttaccgttatgcatgttacagatttgatcaatgtcctgtttctccgttgtcattgaaagcaatcaaagatgctggatatgaaaagatgacccaggtgcaggaggcaactctgccaataatccttcaaggtcagccaaatgaaatatatagtgtcgctcaattgctccacagcatgataccgatctcttgggaaccctggagataatatgtgtgtttgtttcctgcaggtgaagatgttcttgcaaaagcaaagacagggacaggaaaaactgttgcctttttggtattctagtcctttggacccaacttgtcaattcatggcactactttatgctttcatgggactaaccaatttgagtttcatttcttgtttccagcttccagccattgaacttctctctacattacctcgttctccatctataaatttgcttgtgatatgccccacaagggagctagcaaaccaagtggctgctgaggccaggaagcttctcaagtatcatcgctcactgggtgtgcaggttgtaattggcggcacaaaattacctcaagaacaacgaagcatgcaatctaatccttgtcaggttgtgcccaacaaatttagtgcgctcatatctagctttagttttatgcactgataataatacctgggagttgattaacagattcttgttgctacaccgggaaggcttaaggatcatcttgagaatacacctggtttttccaaccgaattaaaggggtgaaagttcttgttcttgatgaagctgaccgcctattggatatgggatttagaagagacattgagaaaattattgctttcattcctaaagaacgacagacacttcttttttctgctactgttccagaagaggtatctcctatttgttactataccccgtttctataatagcaatttgatttcttttttaaatgcttactgttaggttcgtcaaatttcgcacattgcaatgaagaggggttacaagttcattaatactgttaaagagggtgatgaggagacacattcacaggtttataaatgtcactttcatgtgctgttgggtaaattttaagttttgctgctcgcatgaccttacgtttttactcttgcatcaggtaagtcagatgtacatggttgcaccacttgacctgcacttctctatattgtacaatgtactgaagaagcatatcgcagaagatgcagactacaaagtaagttatctcaattttcttcttttttttgagcaagttaccttaccagaccagcttatatattggggatttgtccatgtgtgccccatccaatttttcaggtgattgtattctgtactactgcaatggtcaccaaacttgttgctgaagttctttcccagctgaaactgaatataagagagatccattcgagaaagtcgcaatcagcaagaactaaggtctcagatgaatttaggaaatcaaagggtctgatattagtgagttctgatgtatctgctcgtggtgttgattatcctgatgtcacccttgtcatacaggtgggtcgcatgattacatctcataccaaaataattcatctccatttattgaaatttgtttgccctcgcaggttgggctgccagctgatagagaacagtatatacatagacttggtagaactggacggaaaggcaaagatgggctaggtctcttactgttggctccctgggaaacatactttctgaatagcgttcaggatttgtctgtatcacaagctgtggtacctacaattgattcgagcattcagacaggagtaagtattatgtacttgatatcaagttggctatgtgattctgtcaagggtttttactctagttgagcaatcaacatggctgctcaaaatataatgcactttacgttttctccttttaatctctgcttgatttgataggtcaaagatgcactcggaagagtggagacaaagagcaaggaatcagcctaccaggcatggctagggtactacaactcaaacaaggctattagtcgagacaaatccagacttgttaggctcgcagaagagttcagccagagcatgggtcttgcaattccgcctgccatacccaaactcattcttcgaaaaatgggccttaacaatgttcctgggctgcgatctgtgtaacccttgtgctgaaggttgacaatttttttactgccccccaagtttgacaacctcagttctaagatgactgctgcatcctttttttgaagccagctcttgaccaatctattatcaccaccgggcaggttcaaagctgaaatgaacccagtgatccttcatataggagtaactattttttttcacagttgtactgacctacatcatgtgggagcatatttttttccttcaccataactacactgggccccaagtcctcccgagtatggaaaatgaaatgtacctgttcttgcggcgccacaagacgccacaccacataagcagtggcgtaatataatgcagtcatattgttacatt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0618500, RefSeq:Os01g0618500