Difference between revisions of "Os01g0627400"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os01g0627400| Description = Similar to Cytochrome P450 monooxygenase CYP72A5 (Fragment)| Version = NM_001050166.1 GI:115438702 GeneID:4326694| L...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0627400|
 
GeneName = Os01g0627400|

Revision as of 18:54, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0627400

Description

Similar to Cytochrome P450 monooxygenase CYP72A5 (Fragment)

Version

NM_001050166.1 GI:115438702 GeneID:4326694

Length

3135 bp

Definition

Oryza sativa Japonica Group Os01g0627400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:26697615..26700749

Sequence Coding Region

26697659..26698031,26698234..26698457,26698741..26698988,26699644..26700031,26700127..26700558

Expression

GEO Profiles:Os01g0627400

Genome Context

<gbrowseImage1> name=NC_008394:26697615..26700749 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:26697615..26700749 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagagagaaaaagaagcaatgggcatcggcatcggcatcggcatcggcatcggcatcggcaccggcaccggcgcggcgctaccattcggcgaggcctcgccgtggagcctgctcggcggcgcggtggccgcgctgctgctggtctgggccgcgcagatgctggagtgggcctggctggccccgcggcggatggaacgggccctcagggcccagggcctgaggggcacccagtaccgcttcctccatggcgacctcaccgaggacctgcggctcgtcacggcggcccgctccaagcccgtgcccatggaccggccccacgacttcatcccgcgcgtcgcgcctctgcttcaccgtgccttggaggaacacggtagggtttcttttacatggttcgggccaatgccaagggttacaatcactgatccggacttggtccgtgaagttctatcgaacaaatttggtcactttgagaagacaaagctggccactcggctttctaagttactcgttggtgggcttgtgatccttcatggtgaaaaatgggtcaaacataggaggattatgaatccagcctttcatgcagaaaagctaaagcggatgttgccagcattctccgcatcttgtagcgaactaattggcagatgggagaatgcggttgctgcttctgttggaaaagccgagctggacatttggccagattttcagaatttatcaggagatgttatttcaagagcagcatttggtgtcagacaccacgaaggcagacaaattttcctacttcaggccgagcaagctgaacgccttgttcaatctttccggagtaattacatcccaggcttatctcttttaccgacagaaaacaacagaaggatgaaggcaatagacagagagataaagagtattctaagaggcataatagaaaagaggcagaaggccacgaagaacggcgaagccagcaaggacgatctgctcggcttgctcctacaatccaacatggattattacagcgacgaggacggcaaatccagcaaggggatgaccgtcgaggagatcatcgacgaatgcaagctgttctacttcgccgggatggagacaaccgccgtgttgctcacctggacaatggttgccctgagcatgcacccggagtggcaggatcgcgccagggaggagattctgcaggtctttgggcgaaacaaacctgatatcaatggcgttagccgcctgaaagtcgtgaccatggtgctgcacgaggtgctgcgcctgtacccgccggtggtgatgatgaaccgccgcacgtacaaggagatcgagctcggcggcgtcaggtacccggcgggcgtgatgctgtcgctgcccgtgctgttcatccaccgcgacgccgccgcgtgggggcacgacgccggcgagttcgacccggggaggttcgcggagggcgtggccagggcgtgcaaggaccccggcgccggcgcgttcttcccgttcagctggggcccgcgcatctgcatcggccagaacttcgcgctgctggaggccaaggtggcgctcggcatgatcctgcagcgcttcgcgttcgagctgtcgccggcgtacgcgcacgcgccctacaccgtgctgacgctgcacccgcagcacggcgttccggttaggctgcgccgactctga</cdnaseq>

Protein Sequence

<aaseq>MQREKEAMGIGIGIGIGIGIGTGTGAALPFGEASPWSLLGGAVA ALLLVWAAQMLEWAWLAPRRMERALRAQGLRGTQYRFLHGDLTEDLRLVTAARSKPVP MDRPHDFIPRVAPLLHRALEEHGRVSFTWFGPMPRVTITDPDLVREVLSNKFGHFEKT KLATRLSKLLVGGLVILHGEKWVKHRRIMNPAFHAEKLKRMLPAFSASCSELIGRWEN AVAASVGKAELDIWPDFQNLSGDVISRAAFGVRHHEGRQIFLLQAEQAERLVQSFRSN YIPGLSLLPTENNRRMKAIDREIKSILRGIIEKRQKATKNGEASKDDLLGLLLQSNMD YYSDEDGKSSKGMTVEEIIDECKLFYFAGMETTAVLLTWTMVALSMHPEWQDRAREEI LQVFGRNKPDINGVSRLKVVTMVLHEVLRLYPPVVMMNRRTYKEIELGGVRYPAGVML SLPVLFIHRDAAAWGHDAGEFDPGRFAEGVARACKDPGAGAFFPFSWGPRICIGQNFA LLEAKVALGMILQRFAFELSPAYAHAPYTVLTLHPQHGVPVRLRRL</aaseq>

Gene Sequence

<dnaseqindica>45..417#620..843#1127..1374#2030..2417#2513..2944#ctccgtcccgtttgcttcaacaacacatttgctttgctcggtacatgcagagagaaaaagaagcaatgggcatcggcatcggcatcggcatcggcatcggcatcggcaccggcaccggcgcggcgctaccattcggcgaggcctcgccgtggagcctgctcggcggcgcggtggccgcgctgctgctggtctgggccgcgcagatgctggagtgggcctggctggccccgcggcggatggaacgggccctcagggcccagggcctgaggggcacccagtaccgcttcctccatggcgacctcaccgaggacctgcggctcgtcacggcggcccgctccaagcccgtgcccatggaccggccccacgacttcatcccgcgcgtcgcgcctctgcttcaccgtgccttggaggaacacggtactgtactcgctctacttctgcaatatttgttttcttttgttttgtttttcggcgaacacatccaagatttgattgttgttatgcaactttaagttcatcgtacagttgatctagaaatgccactatttgatcatcaattatcttgtttttttcagtgtctttgtaccatgttctgatctctgtgcgcatgaaaatacaggtagggtttcttttacatggttcgggccaatgccaagggttacaatcactgatccggacttggtccgtgaagttctatcgaacaaatttggtcactttgagaagacaaagctggccactcggctttctaagttactcgttggtgggcttgtgatccttcatggtgaaaaatgggtcaaacataggaggattatgaatccagcctttcatgcagaaaagctaaaggtattattactaggatttactgaaagaattcgtgaatatgagacctgactactgtatttagtattcaggatttcatgtgtaagaattatcatttagtaagacgatcgtttagcctagctatttgatcagaagttaaattaatctgatgaatgcctgcattctttgcagtcactaaacaggtcgaactaaacatattagaactggagatcaatttggttacacttactttcctggtatttttcccctttccctgacttatatattcccttggaactaattgcagcggatgttgccagcattctccgcatcttgtagcgaactaattggcagatgggagaatgcggttgctgcttctgttggaaaagccgagctggacatttggccagattttcagaatttatcaggagatgttatttcaagagcagcatttggtgtcagacaccacgaaggcagacaaattttcctacttcaggccgagcaagctgaacgccttgttcaatctttccggagtaattacatcccaggcttatcgtatggttctcatcactgtcccaacatctttagtttcagtccccgttttcttttttcaactcatctgttggattatacttcctccgtttcatattactacataagactttctagcattgcccacattcatatagatgttaatgctagaaagccttataacctgaaagaagtagtaatttataactggattatttgtttcacacttctaaaaatgctcttaataaactttcttttactgcattgttgacaccacttattctaagttatttgttagttttataatatataatatgtagtttatctttacaaacgagtggatcatccatcaacttttacctgcatagtatatatttaaaacactacctaaagttcagagtgctcctaatctttctttgttttgtttttgttttgccgaatttatcaatatcaagagaaaattaagtacatacaggacaacataatagttgtgagaaaaacatggatggaccaccaaagaccaaaaagtgctccttacatttgccattatttgtgtccaactttcattgtttcgggaatatatccaacttttatgtagagaaaaaaactaaattcattttgtatccacttattcgtttcatccatagatgatagaactaacataatactctccctccagtcttttaccgacagaaaacaacagaaggatgaaggcaatagacagagagataaagagtattctaagaggcataatagaaaagaggcagaaggccacgaagaacggcgaagccagcaaggacgatctgctcggcttgctcctacaatccaacatggattattacagcgacgaggacggcaaatccagcaaggggatgaccgtcgaggagatcatcgacgaatgcaagctgttctacttcgccgggatggagacaaccgccgtgttgctcacctggacaatggttgccctgagcatgcacccggagtggcaggatcgcgccagggaggagattctgcaggtctttgggcgaaacaaacctgatatcaatggcgttagccgcctgaaagtcgtgagttgtgcactctgccccgtaacgcaatttttgcaccgttttctgcaaaagatgttcacgatttgatgatcgatggagccgatctttggcaggtgaccatggtgctgcacgaggtgctgcgcctgtacccgccggtggtgatgatgaaccgccgcacgtacaaggagatcgagctcggcggcgtcaggtacccggcgggcgtgatgctgtcgctgcccgtgctgttcatccaccgcgacgccgccgcgtgggggcacgacgccggcgagttcgacccggggaggttcgcggagggcgtggccagggcgtgcaaggaccccggcgccggcgcgttcttcccgttcagctggggcccgcgcatctgcatcggccagaacttcgcgctgctggaggccaaggtggcgctcggcatgatcctgcagcgcttcgcgttcgagctgtcgccggcgtacgcgcacgcgccctacaccgtgctgacgctgcacccgcagcacggcgttccggttaggctgcgccgactctgatcgtcgggttagggaaagaaaaaaagatgaaatgaaatgaaatcgtctgtatagatccgtgcatccggcattctgaatctctgatatcaaagcagaacacatttgctgataaacactggaagctccatgttccgggcatccggcactctgaaatctcaatctctgatatgaaagcagaacactatttgctg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0627400, RefSeq:Os01g0627400