Difference between revisions of "Os01g0631100"
(Created page with "{{JaponicaGene|
GeneName = Os01g0631100|
Description = Cas1p-like family protein|
Version = NM_001050179.1 GI:115438728 GeneID:4326670|
Length = 6900 bp|
Definition = Ory...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os01g0631100| | GeneName = Os01g0631100| | ||
Revision as of 18:55, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os01g0631100 |
|---|---|
| Description |
Cas1p-like family protein |
| Version |
NM_001050179.1 GI:115438728 GeneID:4326670 |
| Length |
6900 bp |
| Definition |
Oryza sativa Japonica Group Os01g0631100, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:26883720..26890619 |
| Sequence Coding Region |
26884108..26884140,26885020..26885108,26885231..26885359,26885445..26885501,26885579..26885651 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:26883720..26890619 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:26883720..26890619 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggaggtcttcggccccgtcaccgccggccaggtgtcatttttgcttggtctattccctgttctcattgcatggatctattcagaagtcctggagtacagaaaatcttcgtctatgaaagttcactccgattccaatttggagaatggaactgtcaaagaagatgataaaacggtattgctggaaggaggcctgtcaaagtcaccatctacaaagtttcggatcaattctacaaaagcaaacctcataaggtttataacaatggatgaatctttccttctggaaaatcgtgctgtactgagagcaatggcagaatttggcatcgttctggtttatttctacatttgtgatcggacaaacatatttccagaaagcaagaagagttacaaccgtgatctgtttctgtttttatacattcttctcatcatagcatcagcattaacatcacttaagaagcaccatgacaaatcagcattctcagggaaatctatactctatcttaatcgccatcaaacagaggaatggaaaggttggatgcaggtcctgtttttaatgtaccactattttgccgccactgaaatatacaatgcaattcgtgttttcattgctgcctatgtctggatgactggatttgggaacttctcatactattatattaagaaagactttagtcttgccagatttgctcagatgatgtggagacttaatttttttgtggctttctgctgcattgtccttgacaatgattacatgctctattacatatgcccaatgcacactttgtttactcttatggtatatgggtcccttggtctctttaataagtataatgagataccttcagtgatggcaatgaagattgtcagctgcttcttagcagtgatcttgatatgggaaattcctggtgtatttgaactgctgtggagtccatttacatttctgctaggctacaaggacccagagccttcaaaagcaaacttaccactgttgcatgagtggcatttccgatctggccttgatcgttatatatggattattggaatgatctatgcctacttccatccaaatgttgaaagatggatggaaaagcttgaagaatctgaaactaaggttaggttgtcaattaagggaaccatcattagtatttccttggtggctggctatttgtggtacgagtatatttacaaactagacaaaattacatacaacaagtaccatccgtacacatcatggattcctatcactgtttatatctccctaaggaattgcactcagcagcttagaaacgtctctttaactctttttgcgtggcttggcaagattactctggagacctatatctctcagatccacatttggctcaggtctaacatgcctaacgggcagccaaaatggcttctctctttcattccgggttacccactgctcaactttatgcttgctacagcaatatatcttcttatatcatacagagtgtttgagctgacaggtgtgttgaagtcagcttttattcccagcagagataacaatcgtctatatcaaaattttgttgccgggattgccatctccgtatgtctgtatttcctctcaattgtacttcttaagattcccattgtatag</cdnaseq> |
| Protein Sequence |
<aaseq>MEVFGPVTAGQVSFLLGLFPVLIAWIYSEVLEYRKSSSMKVHSD SNLENGTVKEDDKTVLLEGGLSKSPSTKFRINSTKANLIRFITMDESFLLENRAVLRA MAEFGIVLVYFYICDRTNIFPESKKSYNRDLFLFLYILLIIASALTSLKKHHDKSAFS GKSILYLNRHQTEEWKGWMQVLFLMYHYFAATEIYNAIRVFIAAYVWMTGFGNFSYYY IKKDFSLARFAQMMWRLNFFVAFCCIVLDNDYMLYYICPMHTLFTLMVYGSLGLFNKY NEIPSVMAMKIVSCFLAVILIWEIPGVFELLWSPFTFLLGYKDPEPSKANLPLLHEWH FRSGLDRYIWIIGMIYAYFHPNVERWMEKLEESETKVRLSIKGTIISISLVAGYLWYE YIYKLDKITYNKYHPYTSWIPITVYISLRNCTQQLRNVSLTLFAWLGKITLETYISQI HIWLRSNMPNGQPKWLLSFIPGYPLLNFMLATAIYLLISYRVFELTGVLKSAFIPSRD NNRLYQNFVAGIAISVCLYFLSIVLLKIPIV</aaseq> |
| Gene Sequence |
<dnaseqindica>389..421#1301..1389#1512..1640#1726..1782#1860..1932#2525..2683#3771..3920#4029..4284#4374..4495#4669..4755#4858..4946#5024..5086#5184..5240#6178..6274#6364..6522#gagtctgaaactgaaggaaaccaaaccaaaaaaaactccaaccatcgtttgcctccctcgctctgacctcctctccctctcctccgcggccggccccgccgcgagcccgccaccctccggcctctgacggcgagcgaccacccaccacctcccgcttgcttcagatctcctcctccctccctcccgccggccgggccccgcgaccgcccgcccgctcgcttcccctcccgccaacgccgcatataacaccccctccctcccttaccgctcaccgaacgcgcggcgtgatcccctccctccctccctccctccgctgcgatcccggccggacccgtcgagctcccgggatctggtcgtggcacgctcaggggaggggctcccggcgggaatggaggtcttcggccccgtcaccgccggccaggtacgtacgttgcgcgcgtcgccgtcctcgctctctggataggtcgcgtgcgggtagtggaattggttgacgtgcctgtgctgttccgtgttgactgatgtgttaaaaccttgggtattgttctggacttgcggtcgctgctcttgaaaaaaaaaagtttctcccggattgcgcccgcgtaagttcgatttggtttgttgctggacgagttgaagtagatgcattctcctcgatagtcgtggcgttcatcgaattggatagcatgaggatgagcgttgattgatcgctgatggatgcggctttgattaattgatgggggcatatattggtatgatttttagataattaagcatttttcatgaaacggtcctgtgtgatgcgactgaaagttgaaacactccagcctctggaatggagcaaccactggttggttggttgcttgtcgtcttttatcttgcatctgacgctttaggaggttaggtgtacttatgttcccttgcagctgtcttagatttgaagttagtatagtttggtaccaactgagacacaaacatatggttgctctgccaagttaaaagtttcagattcaacctacattgcttacaggaaatgcacattgctgtttgtcttgatctgtatatgcttaacttgattttgggaaacagaaaaggaaaactactaaacacatattgtttagagtaagactctatgattaagttctgtcaggatagtggagtactagtaggtaagctaagtgcacgatttttgttgtttgcaaaaatatctaagctaagggcacatgttatttatgaacttcagttatcttagaattgacagcagtacaattgatggctcttgttgctttgtccattccttcaggtgtcatttttgcttggtctattccctgttctcattgcatggatctattcagaagtcctggagtacagaaaatcttcgtctatgaaagtgtaagttagctatattggtcagtattaactcagtagtacagcgatgtttttacgaattttctaagcctttgagtaacaaatacttaccctggctctatctgtgcatttttttgtttctatagtcactccgattccaatttggagaatggaactgtcaaagaagatgataaaacggtattgctggaaggaggcctgtcaaagtcaccatctacaaagtttcggatcaattctacaaaagcaaacctcataaggtgatttggcataatagtagatgtttgattcatgattacaaacgtggaatgctgagaattaacatctcaatgtcgtgagctgtaggtttataacaatggatgaatctttccttctggaaaatcgtgctgtactgagagcaatgtaagaccctatagaactattttgcatttactgaaaataaatatccatcgatatttacaagcgctatctttctacagggcagaatttggcatcgttctggtttatttctacatttgtgatcggacaaacatatttccagaaagcaagaaggtattgatgccatcattattttaatgatcgttctctcaatttttgattgaaagtaattggtattctttgctagattatcatattagtatagtgccatcctcccaccttactactgtactccttttttacttcttctttttatatctttccctccttttcagttgtaaattccaacattttacactaaggaaatagaatcttcatttctttgcttagtctttctctgaattttgcaactctaatagagaaattggctagaattgacataatcttgatattccatactacttacctgtatgttatttggtgtactgtgcctctagtcttttgtcatacaatctttacctactctactgtattctaccttctcgaacgaatgagcataagaggacatatgctgtaatcttattttgtttattaacaaatagttactgatgaatttcactgctcacttgcttaatatcttctattaaaccccttttattttttacatattaaatataattaacagactttggacagttcaacttttttgtgctatcatattatgaccatattttgataatgattggttttccctctactttgccagagttacaaccgtgatctgtttctgtttttatacattcttctcatcatagcatcagcattaacatcacttaagaagcaccatgacaaatcagcattctcagggaaatctatactctatcttaatcgccatcaaacagaggaatggaaaggttggatgcaggttagtgatttaaataattataaaattttgaatccactgtattttttttgtattctttcttttgttgtcctgtttatgttacaatttagtcaaaggaacacgtgagtgattggtgatcataataaatgttttctgaaagatctgatgctaatagatctgaagagtgggtttgttagtttttcctagacaagttcctgacagtttatctggatttggtatttctagtgggatctgtctatagttgccagaaatatattggccattccaaagcagtctgtgtgtgtgtgtgtgtgttgcgggggtggggggattcattgattgatatgtctagtgtttcataagttgaaggttttttggttgagatgatggaaacaaggtgggaacagttttgcatatcaggctgccactatatctgtaaactgagtctgaatggctgtgctcaacttacatttctactaacacagctgtgcttcatgtcatgtagaatacagtttagttcactgacacgcaggatcatacacagctataattaatgctgctgaaaatatttatgtattattttgcaatagtaccgtcaggttattttcaagtacatatgcttgaacatgcagtagtatatttggcatgtgttcggtatgaactaaactttctttagaaccacatattagtatatcttactagactgttgctagcgaaaacatcattatcttgtactgtttttctgcaatctgcagaggtgcatatatctactccttaaaaactggaattggtgatggtgttggtgtgctctatgtagcctcaactaagaaatttcgtggataaatttatgtagacatttgagtgctgtattttattttaggggcaaaatttactaaaattttgcatatgtatatgtagttttttgtattagagtataattgtttttcaaagtcagaacctatgttatattcatttgagatctgtcacaaactcacaacacacaggcataatggtagtttccttataatgtcagtcaccattattttcagttgctgtcttttgccaacttttaggtaagatttgtaacttttccacctgctgtttacaggtcctgtttttaatgtaccactattttgccgccactgaaatatacaatgcaattcgtgttttcattgctgcctatgtctggatgactggatttgggaacttctcatactattatattaagaaagactttagtcttgccagatttgctcaggtgccattctgatctttaaccccaatctgttctatatgatactttagtatgttttcatttccttgatttaatgcatggtttacactgacaaccatatttctaatgcagatgatgtggagacttaatttttttgtggctttctgctgcattgtccttgacaatgattacatgctctattacatatgcccaatgcacactttgtttactcttatggtatatgggtcccttggtctctttaataagtataatgagataccttcagtgatggcaatgaagattgtcagctgcttcttagcagtgatcttgatatgggaaattcctggtgtatttgaactgctgtggagtccatttacatttctgctaggttggttattcttatatttcgatgtgtcattttccttaccattcctagataaatcatgttaacatgtgttttgtacttttgtgatgcaggctacaaggacccagagccttcaaaagcaaacttaccactgttgcatgagtggcatttccgatctggccttgatcgttatatatggattattggaatgatctatgcctacttccatccaaatgtaagttttcaaggatcacagatgactgttttttatttgatatcactgtagagtctttgtccttctgcccttctccatcattgtttatgtaggatgcaattcattatgctatggtttcaggtatttttcttctatcagtagtagtgcttgaaatgtagatctctgtcatacaggttgaaagatggatggaaaagcttgaagaatctgaaactaaggttaggttgtcaattaagggaaccatcattagtatttccttggtggtaagttgcattatccataagtcccctctgtgctctacattaaattagcaatgatgcacggagtagactgcttattaaccattcctttttgctccacctcaggctggctatttgtggtacgagtatatttacaaactagacaaaattacatacaacaagtaccatccgtacacatcatggattcctatcacgtgagtatagaaatatgccataaaatatatatgtgggcttttgtatcagtgttaatgataccacggtttccatgcagtgtttatatctccctaaggaattgcactcagcagcttagaaacgtctctttaactctttttgcgtaagtcttttcaaactataacctaaaactttttatatttaatttcctgtggattcactttgtcagactaaacttataacatactttttaccaataggtggcttggcaagattactctggagacctatatctctcagatccacatttggctcaggtatgatgctagccttttgtgttcagtatgtgctcctatcttttgtgtctgtgactgcaatgctttaaattctgggctttgtttgtattaacctgttggacacaactgttcaataggagatatggttcagctatgtcaatattcgactcctgtaagaacttaaaaaatctctgttttttagcaacaggactccttttggacttctaagaaagctgttctttttgcaagtcatggacagaattatgccaatcctttttttggaccttcatgctttttcttaacatgaataatattaataacttagatgctgattttcttagtgctcaaacaagtagtcaaagtgtaagttccagaaaatgttagcttatcaggcagaagtaggaagtcacttaacggtagccaagccagtactgggttttcagtacttaagatgtgccagttctttaggaattggtgatcctaaggaaatccatcttcaacctgcgtactgttccgatttctcacatggataaactggagcagtgaatctcaagatcacaatgaaaagctagagccctagacatcatcatgttgatgcagggtacatgaccttctccatgtagaatcttgacacaatggagaacctgatgtagggagattccatcagatattctggacatttatcttttcacatttgctatcattagagtcaccactaaatacgtattacagtagcaactctaccataaaacgttatatccttgtttaagcctttaaggtaagcttatgatgtgaagtactggacagaggtgcagtgtccacaggacgaaacattggatggatcattaacctagattttggcaatgatggctgtgcacgtccaaagtttcagttttgtgcttacatatcaagatgttttgtctctttcgattgtcactgaattcttatatgcatacaggtctaacatgcctaacgggcagccaaaatggcttctctctttcattccgggttacccactgctcaactttatgcttgctacagcaatatatcttcttgtaagtaaaaaagaaaaactgaattccttattttaattccaatataactagagttgccaggaatatttatttgattgtcaacactgcagatatcatacagagtgtttgagctgacaggtgtgttgaagtcagcttttattcccagcagagataacaatcgtctatatcaaaattttgttgccgggattgccatctccgtatgtctgtatttcctctcaattgtacttcttaagattcccattgtataggtaaaagaacctcaacagacaacacaaatcaatgcatctattatatactagacaacagaaaggttttgtggcgcagttccaggaaaagaaaatgttcacggtagaagtttgcttgtgaattgttgttagaatgatccgtcgaccgtcggcgcctagttccaccttgcagatggagataagtgcactccaaataggaagaggatattgttttccacccctttggaaagtaatgtatacattcaggcagtccttgcgttcttttagaagtaatagttggttgcagacttttagccataaaaagtgtacaaggaatttctgtaaaatcaaagtcactgaaacacccagtggtagattcgtgcattggtcatatttcagagc</dnaseqindica> 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