Difference between revisions of "Os01g0639100"

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(Created page with "{{JaponicaGene| GeneName = Os01g0639100| Description = Similar to Eukaryotic initiation factor 4A-3 (eIF4A-3) (eIF-4A-3)| Version = NM_001050208.1 GI:115438786 GeneID:43265...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0639100|
 
GeneName = Os01g0639100|

Revision as of 18:55, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0639100

Description

Similar to Eukaryotic initiation factor 4A-3 (eIF4A-3) (eIF-4A-3)

Version

NM_001050208.1 GI:115438786 GeneID:4326580

Length

3480 bp

Definition

Oryza sativa Japonica Group Os01g0639100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:27392841..27396320

Sequence Coding Region

27392866..27393161,27393446..27393686,27393767..27393847,27394247..27394354,27394467..27394586
,27394944..27395108,27395199..27395288,27395940..27396053

Expression

GEO Profiles:Os01g0639100

Genome Context

<gbrowseImage1> name=NC_008394:27392841..27396320 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:27392841..27396320 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggccaccacgtcgcggcgcggcccgggcgccatggacgacgagaacctcaccttcgagacctccccgggggtcgaggtcatcagcagcttcgaccagatggggatccgcgacgacctcctccgcggcatctacgcctacggcttcgagaagccctccgccatccagcagcgcgccgtcctccccatcatcagcggccgcgacgtcatcgcccaggcccagtccgggaccggcaagacctccatgatctcgctctccgtctgccagatcgtagacaccgccgtccgtgaggtgcaggctttaatactgtcaccaactagagaacttgctgcacaaacagaaagagttatgctggctatcggtgacttcatcaatatccaagtgcatgcttgtattggtggcaaaagtattggtgaggatattagaaagcttgagcacggagtgcatgtggtgtcaggaacacctggcagagtctgtgatatgatcaagagaaggaccttgcgtacaagagccattaagctcctaattctggatgaagctgatgagatgttgggcagaggctttaaggatcagatatatgatgtgtacagatacctccctccagaactccaggtttgcttgatctccgcaactctgcctcacgagatcttggaaatgaccagcaagttcatgactgatccagttcggatccttgtgaagcgtgatgaattgactctagagggcatcaaacaattctttgttgctgttgagaaagaagaatggaagtttgacacgctttgtgatctttatgatacactgacaatcacccaagctgtcattttctgcaacacaaagagaaaggttgattggcttacggaaagaatgcgcagcaataacttcacagtatcagctatgcatggcgacatgcctcaaaaggaaagggatgccattatgggtgaattcaggtctggtgcaacccgtgttctaatcacgacagatgtgtgggctcgaggcctcgatgttcagcaggtctctcttgtcataaattatgatctcccaaataatcgtgaactttacatccatcgcattggtcgctctggacgttttggtcgcaagggtgtggccatcaattttgtcaaaaaggaagacatccgtatcctgagagatatcgagcagtactacagcacgcagattgatgaaatgccaatgaatgttgctgatctaatttga</cdnaseq>

Protein Sequence

<aaseq>MAAATTSRRGPGAMDDENLTFETSPGVEVISSFDQMGIRDDLLR GIYAYGFEKPSAIQQRAVLPIISGRDVIAQAQSGTGKTSMISLSVCQIVDTAVREVQA LILSPTRELAAQTERVMLAIGDFINIQVHACIGGKSIGEDIRKLEHGVHVVSGTPGRV CDMIKRRTLRTRAIKLLILDEADEMLGRGFKDQIYDVYRYLPPELQVCLISATLPHEI LEMTSKFMTDPVRILVKRDELTLEGIKQFFVAVEKEEWKFDTLCDLYDTLTITQAVIF CNTKRKVDWLTERMRSNNFTVSAMHGDMPQKERDAIMGEFRSGATRVLITTDVWARGL DVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKKEDIRILRDIEQYYSTQ IDEMPMNVADLI</aaseq>

Gene Sequence

<dnaseqindica>26..321#606..846#927..1007#1407..1514#1627..1746#2104..2268#2359..2448#3100..3213#tctttctagggtttcgtctcccccaatggcggcggccaccacgtcgcggcgcggcccgggcgccatggacgacgagaacctcaccttcgagacctccccgggggtcgaggtcatcagcagcttcgaccagatggggatccgcgacgacctcctccgcggcatctacgcctacggcttcgagaagccctccgccatccagcagcgcgccgtcctccccatcatcagcggccgcgacgtcatcgcccaggcccagtccgggaccggcaagacctccatgatctcgctctccgtctgccagatcgtagacaccgccgtccgtgagtacgcctcttacccaccaatctgacattttacttcagtatttccactttttccccctactgtgcgatctattttgctctagattaacttgcattgcagcatcgtgctagtactgtgcgatctattttactagggtttagcataatgttataggtgatggcttccaaatttattagagctgtactgctgtacacaaattctttccatgcctgttttggtgctgattattgttcactgttgttgtctatgttcccgtaatcctaatattgtttctcattatgtagggtgcaggctttaatactgtcaccaactagagaacttgctgcacaaacagaaagagttatgctggctatcggtgacttcatcaatatccaagtgcatgcttgtattggtggcaaaagtattggtgaggatattagaaagcttgagcacggagtgcatgtggtgtcaggaacacctggcagagtctgtgatatgatcaagagaaggaccttgcgtacaagagccattaagctcctaattctggttggtttacttttcatgttgtttttgaaaccacctttggtttgatcaaatggtatgagaataacattcttccatgacaggatgaagctgatgagatgttgggcagaggctttaaggatcagatatatgatgtgtacagatacctccctccagaactccaggtcaatctcatattaaacctgtcataaacttatagtttgtcttgtgtttcagtgttctatcagctagttgattattttaataagaattcagctcctgaagtgtattgtaatctatttttcatctctggtgcatttttccttgcactgttccatccatgttttgatccttgtaacatatcatcataccaacagactagctatcttgtctctgtttggattcagtaatgcatgctttattatatgctgatatgcatatgcagatttgcttattgtaatgccacctctggcttcacatgagcgcaatgcatgaacttgatgacaataaatgatggcaatcttgggcagtgaggtcccgaatcccaatgctaatgtgcaagcatatcttttttgtctgcacaggtttgcttgatctccgcaactctgcctcacgagatcttggaaatgaccagcaagttcatgactgatccagttcggatccttgtgaagcgtgatgaattgactctagaggtaaatatcatcacttgtttttcttatcagtttgatgatcttcaatatgtattttactttgttggttctattgatctttaaatatattcgtctttccatatcatgtttgtagggcatcaaacaattctttgttgctgttgagaaagaagaatggaagtttgacacgctttgtgatctttatgatacactgacaatcacccaagctgtcattttctgcaacacaaagagaaaggtgatatatagttttcttttttgttatggtcgtttcactggtactctattattgttttataaagtctgctccctctgttatttgtctacaccaaattattttgctatcctatggtcatagcttctttgtagctttttcaaacacctcttttttgtgccatctaggcagtgggcattactccttgtccttgtctttctgaacttgttgattatggttagaatacttgttcatgcaagcacatgagttgatattttctgtttgctatttccttactatgttgaattgcaatgttttctaactatgctgacttgtcattactgatgttttgctcgatatcctggggtttactttggtcaggttgattggcttacggaaagaatgcgcagcaataacttcacagtatcagctatgcatggcgacatgcctcaaaaggaaagggatgccattatgggtgaattcaggtctggtgcaacccgtgttctaatcacgacagatgtgtgggctcgaggcctcgatgttcagcaggcaagtttattgtaatgttttgtttgaagactattgattttatcgtgtgtggagtactgattaagtgattattatttcatttattttcaggtctctcttgtcataaattatgatctcccaaataatcgtgaactttacatccatcgcattggtcgctctggacgttttggtcgcaaggtaatactgcacaacttgcaactctttattctaactaaatctatcctctactttgtttgcgagttattcataacaagggaattttggttcaagttttgttggtactaacacatgtaccatggttttgctcaacacaattgcacattcgccaataatcatgttgataataatgaatcaaatgcttgcacattttgttttggcagtatatgacaaatcagagaacaagaattctgatttcatactgttcacacagaatgaaatattgaggagccgctacacttttttttttttgctaaagaatggcacgtggttaaaaaattgttggcctatgacatgtgatgcattatgttagtgttttgtggcaagccaatcgtgtgataacaagccaaacactaggctaagttggtaaacctccttaccaaagatgtggtaaagtgtggctaccaaccaaacacctgtgtactccagtaaaccgaacagctgaccacatttatctagattctagaaacaactaaacaatatttactctgaattccaaatgttccgtgagattgaggaaaatgatttcgagacagatccatgtcctggcattagaaatcatttgattgggctgatgctaaagaccaaaaacattttccttgcatgatgtagggtgtggccatcaattttgtcaaaaaggaagacatccgtatcctgagagatatcgagcagtactacagcacgcagattgatgaaatgccaatgaatgttgctgatctaatttgagtgctggagtggcgctaccatgtttgatcatctggtctggcaacaactgagcttgtttgttgtgattttggttgacatgctttgccgtgactgtattgctatggactttaaagggttgcgagtctaatactagtgattggtttcgttcccctctcttgtgacatgatctgtatataattttagtgccagctcatgtaacactatgattgcatttctgctcagaacatgagacttgttcgttatatttattgccacaaggatttgatg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0639100, RefSeq:Os01g0639100