Difference between revisions of "Os01g0682500"

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(Created page with "{{JaponicaGene| GeneName = Os01g0682500| Description = Conserved hypothetical protein| Version = NM_001050421.1 GI:115439212 GeneID:4324401| Length = 3702 bp| Definition ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0682500|
 
GeneName = Os01g0682500|

Revision as of 18:56, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0682500

Description

Conserved hypothetical protein

Version

NM_001050421.1 GI:115439212 GeneID:4324401

Length

3702 bp

Definition

Oryza sativa Japonica Group Os01g0682500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:29882422..29886123

Sequence Coding Region

29882490..29882646,29883190..29883548,29883902..29883981,29884064..29884115,29884209..29884250
,29884338..29884416,29884579..29884610,29884690..29884758,29884845..29884915
,29884996..29885116,29885205..29885255,29885763..29885906

Expression

GEO Profiles:Os01g0682500

Genome Context

<gbrowseImage1> name=NC_008394:29882422..29886123 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:29882422..29886123 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgccgctccacgccgccccgcaccatgccgcggccgcggccgcggtcgtctcctcgccctcatccgcgccgctcctcctccgcgccaagccttaccaccccaaggcggcggcttgctccttcaccgtgaccgccaccactccgtcgaggaaagctttcctgtcgtgcccggatcacggccaggcggcggcgggggcggcgccgccgcgctccgccccggcgtcgtcgccggcgctcatctcctccgtccaggacctgtacgacttcatctgcagcggcccgctcgtggacaggatcgggtacaccaaggagaagatcgccggctccatcgaccggtggctgcgctgcggtgtgcaggtggcccggctgttccgcctcaacgagctccacctctcggaggcggagaaggccaggatataccacttctacatccccgtcttcctctggtgcgaggaccaggtcacggagcacagggccaagtacaaggacggcgacgagatccctccattagtgattggggtcagcgctccccaaggcagtggaaagacaactcttgttttcgcacttgattatctttttcgggttgctggtaggaatgccgctacattatctatcgatgacttctacttgacggcagcagaacagggtaaattgagggaaagaaatcctggaaatgctcttttggagcttcgtggaaatgctggaagccatgatctcccgttctcagttgaaacacttgaatcgctgcttaaactaactaaagaaggtttgaagatgaagcttccacggtatgacaagtctgcttttggtggaagaggtgatcgggctgatccttcaacatggccagaggttgaagggcccttagaggttgttctttttgaaggatggatgcttggattcaaacctcttccaaatgaagttgtaaaagcagtggaccctcagcttgaggtggttaataagaaccttgaggcatactacgatgcatgggacaggttcattgggtcatggatggtcataaaaataaaggaacctagttgcgtgtaccagtggagactgcaggcagagatagctatgagagcagatgggaaaccaggaatgtctgatgaggaggtcatggattttgtgtcgcgctacctaccagcataccacgcatatttgcccactctatataaagagggaccaaacggctcgaacccagaccacctgctggtcgttgacatagacgaaaagaggaatcctatgtggggtagatga</cdnaseq>

Protein Sequence

<aaseq>MTPLHAAPHHAAAAAAVVSSPSSAPLLLRAKPYHPKAAACSFTV TATTPSRKAFLSCPDHGQAAAGAAPPRSAPASSPALISSVQDLYDFICSGPLVDRIGY TKEKIAGSIDRWLRCGVQVARLFRLNELHLSEAEKARIYHFYIPVFLWCEDQVTEHRA KYKDGDEIPPLVIGVSAPQGSGKTTLVFALDYLFRVAGRNAATLSIDDFYLTAAEQGK LRERNPGNALLELRGNAGSHDLPFSVETLESLLKLTKEGLKMKLPRYDKSAFGGRGDR ADPSTWPEVEGPLEVVLFEGWMLGFKPLPNEVVKAVDPQLEVVNKNLEAYYDAWDRFI GSWMVIKIKEPSCVYQWRLQAEIAMRADGKPGMSDEEVMDFVSRYLPAYHAYLPTLYK EGPNGSNPDHLLVVDIDEKRNPMWGR</aaseq>

Gene Sequence

<dnaseqindica>69..225#769..1127#1481..1560#1643..1694#1788..1829#1917..1995#2158..2189#2269..2337#2424..2494#2575..2695#2784..2834#3342..3485#cgtcctcctcctccccagcagtcccacccgcgcacgcacgtcgatccgggagagagagagagagcgcgatgacgccgctccacgccgccccgcaccatgccgcggccgcggccgcggtcgtctcctcgccctcatccgcgccgctcctcctccgcgccaagccttaccaccccaaggcggcggcttgctccttcaccgtgaccgccaccactccgtcgaggaaaggttagcaactcagacatcattagaaaaaaaaaaaaccatctaatatctgcgtgcgtgcgtacgacgagaggtcacggcggcgcactgtggcaaccaactaggagtactttggctcgtctgcgctggtctgtgccgctgtgcgcgcactgtttctcttctcttgtttattgcttgcttggccttttccgtgctcgcgtaagcggataagggtcgtgtgccatggtgttttgcaagcgtacacctgcccctgcgtctgactcgacgagccgtttctttatcctttttttttttagctgcagagagcaatgtttgatcatccatataaaactctcgcgcatccgtttttctctctcttgctggggtcaagaggtcaatacacagttcggtccttcaaagatttggtcctttttgctatagtttagatcgtcgatttctcaggttcttgacaccgcatggatggtaggatcaagaaaggcatcgccgcgcaagtcacgattcctctcgccattttaactgatcgccctgtttctttctttgcgccagctttcctgtcgtgcccggatcacggccaggcggcggcgggggcggcgccgccgcgctccgccccggcgtcgtcgccggcgctcatctcctccgtccaggacctgtacgacttcatctgcagcggcccgctcgtggacaggatcgggtacaccaaggagaagatcgccggctccatcgaccggtggctgcgctgcggtgtgcaggtggcccggctgttccgcctcaacgagctccacctctcggaggcggagaaggccaggatataccacttctacatccccgtcttcctctggtgcgaggaccaggtcacggagcacagggccaagtacaaggacggcgacgagatccctccattagtggtatgcacatgaaacatttttctctttatcatagaagaagctgatgaaatctgacatgtagctttgtccactagtgcctgatagcatccattccaaacctctcatggcatgttccatcaggtggacatagcagaacatattcctctgcattatgagtacatcgcacaaaatatttcatcatgaagcatctattgctttaatcagcatgacacgcactcatggatcgttttatcacgaagggatatattaattataccgaaatgggaactgtgaatatcaagtcacaagaacggacaagtctttatctgattctaattcacattttgtaaatgaatcgtctttgtgtgatgtagattggggtcagcgctccccaaggcagtggaaagacaactcttgttttcgcacttgattatctttttcgggttgctggtaggtgagttcttcttgtcattctagtcatgttatgtttacccgtatcaatgaaatttaaaagacaagacttttccgtgccttaggaatgccgctacattatctatcgatgacttctacttgacggcagcagaacaggtgtgagtcttcaaatattgtgcaattatccgttctgttttactactccaagtacttggcaaattagtgaaaacaattaatgaatatttccagggtaaattgagggaaagaaatcctggaaatgctcttttggaggtacaaagaacaccccagatccaatatacactgttttggttcaagtattgtattgtgaactgagagtaaataaccaaaactttacagcttcgtggaaatgctggaagccatgatctcccgttctcagttgaaacacttgaatcgctgcttaaactaactaaagaaggtactgatttttgacaagtatatatatcctcttcagaccaattttattatatttgaacagccttgcacatagtatattttttattttggagaatttattgaaatgatatgcatcctagtttcaatgtaaaatagtttgtcactgatattacaatatatttaggtttgaagatgaagcttccacggtatgacaaggtaaaaggttgcagttatcgtcgcctagatgatttttataattgagtagctgcatgatacatgtcacatgtccatgtagtctgcttttggtggaagaggtgatcgggctgatccttcaacatggccagaggttgaagggcccttagaggtaagctcatgttgagctgtagggctttttgagatgagaaaattgtaatttttgaacattttctatgtctgttttctctgtcctaggttgttctttttgaaggatggatgcttggattcaaacctcttccaaatgaagttgtaaaagcagtggaccctcaggcgggtttccgatattaccacattatctgatttctttgtttctcttttacttaatatgacttgccttttttcatcttcagcttgaggtggttaataagaaccttgaggcatactacgatgcatgggacaggttcattgggtcatggatggtcataaaaataaaggaacctagttgcgtgtaccagtggagactgcaggtcattaccagatttatctaagtaactaatggtgtcagaaaatgcacaaccatgaattgcaattttcttatgttatttggatttacaggcagagatagctatgagagcagatgggaaaccaggaatgtctgatgaggaggtttgtttctcacatagctatgcattcattataacatcctattggcttcctttccgtcctagtttgataatttgctaatgccttgctgttactaaccgtcaagtaaagtagacaaattgccaccaattaggaatagctcccactgaattcagttgtggccaaactgagtaagtacaccactcacatcagtacatttgagtaaaatcttcagggacgcaaaagtacttgctactcagtgaatcacctctaaaaacctattcatgtaacagactggttttccgtgttgaaaattgaaagaaaacagggaattcccgtgattggaaaaagaaaaaaactgcatcacttcacctgaaagttgagcaacaagaactgttactagtattgaattatctgatgtattcttcagtgaacaattttatgctattcactgaagctcattcgagtcttggattctctttctaatgcatttgatgagctaggttaacatgcttctggtaattcttgcaggtcatggattttgtgtcgcgctacctaccagcataccacgcatatttgcccactctatataaagagggaccaaacggctcgaacccagaccacctgctggtcgttgacatagacgaaaagaggaatcctatgtggggtagatgagccctgaatgtacattgctgaaagaaaatggatcttctgacccaatggtggagtttgggatatctgatctttctgagaccacatattccaagcaagcaccactggcctcttgtttcttgtggcttgaacaagtactaaacgtgtaaaactttgatgtatacgaaatcttgctattacttataaggaaatcggaatcccaattcattttgctgagtgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0682500, RefSeq:Os01g0682500