Difference between revisions of "Os01g0683400"

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(Created page with "{{JaponicaGene| GeneName = Os01g0683400| Description = Similar to Origin recognition complex 4| Version = NM_001050423.1 GI:115439216 GeneID:4324139| Length = 4384 bp| De...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0683400|
 
GeneName = Os01g0683400|

Revision as of 18:56, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0683400

Description

Similar to Origin recognition complex 4

Version

NM_001050423.1 GI:115439216 GeneID:4324139

Length

4384 bp

Definition

Oryza sativa Japonica Group Os01g0683400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:29917578..29921961

Sequence Coding Region

29917627..29917748,29917831..29918056,29918410..29918466,29918762..29918809,29918987..29919037
,29919117..29919160,29919261..29919324,29919515..29919601,29919892..29919983
,29920077..29920158,29920688..29920773,29920871..29920980,29921137..29921229
,29921305..29921369,29921464..29921607,29921744..29921785

Expression

GEO Profiles:Os01g0683400

Genome Context

<gbrowseImage1> name=NC_008394:29917578..29921961 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:29917578..29921961 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcggcggcggctgcgtccgtggcgagtcaagcgcaggccgtgctccgcggcaggctctgcgaccaggccgtcgtccactccgccctcaggtcctcgccggacaccaactacagtaagctgaagtacctcgtcgccagctccgtctccgaagcctgcaacaactccgtcctactcctcggcccccgcggctgcggaaaagccgcggtgaggttttccttcctagtatactcttctgccccactttcagcggttttctcggatgcgggggtggtgttcgacgaaatgtgccagtgggcgatctacgactttacgctatgggttgtttcggcatggactgaggtggtcgacatggttctagatgatctgaagaaggatcatcctgatgcaatatcagtgatcaggctgaatgggatgctacatagtgatgacaactgtgccacgaaggaaattgcgaggcaactttgtttggaacatcagttatcattttccaaaatggcttcttcagatgacaacacggaattcatgattgacatgttacgggagtgtggactagctcacaagacaataatttttgtcctagaagagtttgacctctttgctcaggggaagcagaggttactctatagcttacttgatgcaatgcaatctctcacctcacaagctgttgttattggtgtgagttgccgattggatgcagaccaactcctagagaaaagggttagatcccggttctctcataggaagcttctgtttgttccttcttcagtggatagtttacagaggttaatggagcacttgctagcacttcctgaagattctcccttaccaacaaagtatgtcagggagtacaatgcacggattactagcattttcaatgacaaaaagttcaaaggaattctcagctccctcactgatgctgacgcaacaacaagccacatccttagatttcttttcagagtggtgtcatacatggacatagattctggacttctgtcaatgcaaagcttcatgaatgcgctatcttcgatgcagaggcagcctaagatggacagtttgcaagatctctccattttggaactatacattcttgtatgcatgaacaggctagaagataaggagaaaagttcatacaactttatcactattatgaaagagtacaaatctgtgcaggatgcctacaaaacgtcggacaaatattcacacactgtttgttttagagcttttgagcatcttttggatcgcgagttgattagctttgcagacaacaaagggagaaatcaggcgcttgaatatcgtcctgtcaaacttctgatatcttcacgtgagcttgctgagtccctcaagttgaacacgacctgccctgctgttttgcagaagcttcttgaccgtgaaagatacatgtaa</cdnaseq>

Protein Sequence

<aaseq>MAAAAAAASVASQAQAVLRGRLCDQAVVHSALRSSPDTNYSKLK YLVASSVSEACNNSVLLLGPRGCGKAAVRFSFLVYSSAPLSAVFSDAGVVFDEMCQWA IYDFTLWVVSAWTEVVDMVLDDLKKDHPDAISVIRLNGMLHSDDNCATKEIARQLCLE HQLSFSKMASSDDNTEFMIDMLRECGLAHKTIIFVLEEFDLFAQGKQRLLYSLLDAMQ SLTSQAVVIGVSCRLDADQLLEKRVRSRFSHRKLLFVPSSVDSLQRLMEHLLALPEDS PLPTKYVREYNARITSIFNDKKFKGILSSLTDADATTSHILRFLFRVVSYMDIDSGLL SMQSFMNALSSMQRQPKMDSLQDLSILELYILVCMNRLEDKEKSSYNFITIMKEYKSV QDAYKTSDKYSHTVCFRAFEHLLDRELISFADNKGRNQALEYRPVKLLISSRELAESL KLNTTCPAVLQKLLDRERYM</aaseq>

Gene Sequence

<dnaseqindica>50..171#254..479#833..889#1185..1232#1410..1460#1540..1583#1684..1747#1938..2024#2315..2406#2500..2581#3111..3196#3294..3403#3560..3652#3728..3792#3887..4030#4167..4208#ggctgttcctcctcctccttcccccgatccccaactccttccaactcacatggcggcggcggcggcggctgcgtccgtggcgagtcaagcgcaggccgtgctccgcggcaggctctgcgaccaggccgtcgtccactccgccctcaggtcctcgccggacaccaactacaggtcagccagagtcgctccccctcccgcgaaatcagcccgggagtcctcgcgactgacgcgctttgttctgggttgggcacagtaagctgaagtacctcgtcgccagctccgtctccgaagcctgcaacaactccgtcctactcctcggcccccgcggctgcggaaaagccgcggtgaggttttccttcctagtatactcttctgccccactttcagcggttttctcggatgcgggggtggtgttcgacgaaatgtgccagtgggcgatctacgactttacgctatgggttgtttcggcatggactgaggtggtgtttggatcagggacttaactttagtccatgtatttagatactaatttagagtattaaatatagactacttataaaactaattacataaatgaaagctaattcgcgagacaaattttttaagcctaattaatccataattagagaatgtttactgtagcatcacataggctaatcatggattaattaggctcaatagattcgtctcacgaattagtccaagattatagatgggttttattaatagtctacatttaatatttataattagtgtccaaacatccgatgtgatagggacttaaaagttttagtcccatctaaacagggtctgagatttcaattcttcgcaggtggtcgacatggttctagatgatctgaagaaggatcatcctgatgcaatatcagtggtatgtataaacgttatattttacttgttgctagaaatgtatccatgtatttgcgtaatacacgatcgatgatttacctacgttggccgtgaaataaacatacatgttacgagaaaatagtttgtttcagggcgctttagggcggaaggggacaaggataaatgtagaaactccttgcatatttttatgttctcaaatgcatggcctagccaaaaggacaatatatcataatgcacaattagttagactttgttaacttgtagttcagttggattattgtgcaaacttttttcagatcaggctgaatgggatgctacatagtgatgacaactgtgccacgaaggttagagctttctgatgccagcttttttggttcaatttccgtattccacatgccctccgaaccaaatctccctctctcttaactcctgtccaccaattcagttaacttcatagttgtttctatgctttatcaactccaatgcagccatgctaatgcttttgttactttgcttttaaggaaattgcgaggcaactttgtttggaacatcagttatcattttccaaaatggtgtgtggtgtctactctagccttcacctcactcaattattgttctctctaccattttaaaagatcttatctcttttaggcttcttcagatgacaacacggaattcatgattgacatgttacggtaagtgaagtgttaagatgatgagcatctgtacatcatagagacatactccttgattcttgaaatttatgtccagtcatctgtatcctctcttctgcagggagtgtggactagctcacaagacaataatttttgtcctagaagagtttgacctctttgctcaggttgaaacaaatacatgcattctggtttaactatacttaattcatgctgaatgttagatgcatagaattgtagcacgtcatggtttatgggacatttgtcttacaggaatagcttgctttctacaattgctgctggcaattattagataacaggataacagatgattctatttatggtttcctattacaggggaagcagaggttactctatagcttacttgatgcaatgcaatctctcacctcacaagctgttgttattggtgtgagttgccgattggtatgaaatatatcctctcccatgtttctgcatcttagccgtttgtaatttgtgtgctagtacactgtcataagatcaccatctcccatgtttcagatgaccctcttaatcgtgtggtagttgatacacaatatgcattagtgcagtagcatgtcacatgcattgtggtaattaatgataccaacgctgtacttgggattgaagtggctaataactttagacattgatagttctacgaaaaatctactgtttcctttgtgagctgttttgtaatatcaattcatttttaggatgcagaccaactcctagagaaaagggttagatcccggttctctcataggaagcttctgtttgttccttcttcagtggatagtttacagaggttagccttgtgcattttttttttcaggctaaaacattcactgtttctcaagatctctattcaatccatcttttgacatttgaatgattgcaggttaatggagcacttgctagcacttcctgaagattctcccttaccaacaaagtatgtcagggagtacaatgcacggattactgtatcctttgctcaatgtgacatgtcactttatgtgcttacaaaacctgcaggtcactgttcttgctttataatcctcacggcaatcatatttgaataggctgacaaatacccacagagtgttttgttaatgggcagtttttctgtttcttattccaagaatggatgctgaatgtgttcttttctatgctaaaaagaagccatggtggcaaactggcaatggcactgtttcttaggctaaatggaactgtatgtgatcatcccatcaagttctataatattgtttgtgttattgtgcaaaacaaaattgtaatccatataatcaactaggtaaggtagtgcagaaaattgcattaaaagcttgggatttccttgtatgctgctgaaagttcacattctcatgccactcattgtctcagtgacatgggcttggatccacctttgtcataacgacaatgagggattttagagttcaatgcaatataaggaactaatcccccccaaggtttatgttatcctatacacttcagagcattttcaatgacaaaaagttcaaaggaattctcagctccctcactgatgctgacgcaacaacaagccacatccttagatttctgtaagtatttcagcagcttcttttttttatcctcccttttcttcacatttccacactttttagtactcagttaaatataggagaacgaaaccttcagtttcagagtggtgtcatacatggacatagattctggacttctgtcaatgcaaagcttcatgaatgcgctatcttcgatgcagaggcagcctaagatggacagtttgcaaggtctattttgtttgttgtccctcatttacttatgtaggatggaattgttcgctgtattgatttatatgctaaaacaaagctaccttcattactccacaccataaaacagtggacatgaatggcaccatatttctgacactgaaatttcgatagcagatctctccattttggaactatacattcttgtatgcatgaacaggctagaagataaggagaaaagttcatacaactttatcactattatgaaaggtagaatctgttcctctccatttgtgttcagtcataggaaagactaagtaagttgatgaactggttgtctgtcagagtacaaatctgtgcaggatgcctacaaaacgtcggacaaatattcacacactgtttgttttagagtaagtattagcacaatcaagaattcatgaaccttccattatattgaaatttcaatataaaaaaattacaacttttttttccccttcgatataggcttttgagcatcttttggatcgcgagttgattagctttgcagacaacaaagggagaaatcaggcgcttgaatatcgtcctgtcaaacttctgatatcttcacgtgagcttgctgagtccctcaagttgaacacgacctgccctgtgagttaaacgtccacctgttttccaatttaacgatcatctgatccttaccccttttgtggcttgccgttctatctcaatacgctaacaggttgtcatgctttgtgaatgatggtgctctggtttactattgcaggctgttttgcagaagcttcttgaccgtgaaagatacatgtaaaagtttctatatgtttgctaagttgatactggttcaagtgctggcatacttctttcttctttgttactccctaacaccgtgttggaacatcctatctactgcaaagagatttaccttgaagatgaaaaaggtatatcggtctctggcaaggtaacaaactaacaacacaccatttc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0683400, RefSeq:Os01g0683400