Difference between revisions of "Os01g0701900"

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(Created page with "{{JaponicaGene| GeneName = Os01g0701900| Description = Similar to Phosphatidylinositol transfer-like protein III| Version = NM_001050526.1 GI:115439422 GeneID:4326931| Len...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0701900|
 
GeneName = Os01g0701900|

Revision as of 18:57, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0701900

Description

Similar to Phosphatidylinositol transfer-like protein III

Version

NM_001050526.1 GI:115439422 GeneID:4326931

Length

4922 bp

Definition

Oryza sativa Japonica Group Os01g0701900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:30823120..30828041

Sequence Coding Region

30823300..30823320,30823848..30823922,30824184..30824350,30824429..30824584,30825000..30825123
,30825341..30825451,30825537..30825635,30825743..30825842,30825919..30825968
,30826049..30826150,30826297..30826374,30826453..30826719,30826813..30826909
,30827034..30827337,30827774..30828038

Expression

GEO Profiles:Os01g0701900

Genome Context

<gbrowseImage1> name=NC_008394:30823120..30828041 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:30823120..30828041 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaaaagaaaacagaagcttctcttcccctctcccccaaaacaaaagcatcaaaatattcctcctaaatcaaaagaaaaacaatcaatttcaaacgagccatctctctccattctcgtgcccctcctgtctccgcgcattcctccgccggaaaccctggttcatcggcgagcggcgaggctcggggactcgattaccctgcgaggaatcgaggtcggaccgcgggtggggaaggcgaagatggcggggtccatcgatcggccctcaggtgcaggttttgaaggcattgtgcatgatgatgataagaaagagtggaaatccgatgaggacaactcagaaggtgacaaaaaggccaaggcagtctccttcaagaaccgagctatcagtgctggaaataaatttaggcgttccttgagaaggaagagaagaaggagggtcggcgaccatgtagcctctatagaggacataagggatgtcaaggagctggaagctgtccaaagatttcaccagtgcttacatgatgagggcttgttgccagaacgtcatgatgattatcacgtgatgttgaggttcctgaaagcgcgaaaatttgatattgataaagcaaaacatatgtggtcggaaatgcttagatggaggaaggagttcggggctgacaacatagaggaatttgactatagcgaattagatgatgttctggagtgctatccacaattttaccatggtgtggataaagagggaaggcctgtctacatagaactaattggaaaagttgatcccaacaaattagtacaagtcacaactattgacagatatgtaaagtatcatgtcaaggagtccgagaagtgcttgcagatgaggtttccagcttgctccattgctgcaaaaaggcacatagattcgtgcagtactatcttggatgtgcaaggagtgggtttgaagaacttctcaaaagatgcaagagagctaatcatgcgacttcagaagatcaacaatgacaactatccagagaccttgcaccgattgtacattataaatgctggccaaggcttcaagatgttatggggtacaataaaatcatttcttgatccacaaactgcttcgaagattcatgtccttggaagcaaataccaaaataagctacttgaaactattgatgagagtgaacttccagattttctgggtggcaaatgcaggtgtgaagaacatggaggttgcataaaatcagataaaggtccttggaaggatcctgacataataaagagggtccttaatggtgaagcaaactatggacggaaaattcttgctatatcaagcgttgatgggaagaaaatatgttatattaaccctagacacttaactaaaaaatgcagcgatgcctctgctgagtctagttctgaaatggaagatgtttcatctcctatagcttcagttaaccccatcataaaccctcatttgacacccgttgacgagtccaaattgccgggaaatacttccacatctggtgcccctcccagagtagaggacatccctgttgttgacaaggctgtggacacatgcgccggtccatcaaccagctcaatggcttttaattcagattcgttctcgttgagaaacataacgatggaactgggaggacttcgaaatcgaattactgcgtggttgatagtcttaatcgtgagctttgttgccgtgcttcgttctgtcccaagcagagtgactgcaagtctatcaagccaggccatttcccgtgaaaacagtacacattcgtctgtattgagacgtcttggtgaattggaggagaaattacaggagcttgaagcaaagcaatctcaaatgccaccggatagagaggaattgctcaatggagccattcaccgtgttgatgcattggaagccgagctaatatctacaaagaagatgctttatgatgcattgatgaggctggacgaactgcttgcatacgccgaccagcaaaagaatattcaatttcggaaaaagaggttctgcttctaa</cdnaseq>

Protein Sequence

<aaseq>MKRKQKLLFPSPPKQKHQNIPPKSKEKQSISNEPSLSILVPLLS PRIPPPETLVHRRAARLGDSITLRGIEVGPRVGKAKMAGSIDRPSGAGFEGIVHDDDK KEWKSDEDNSEGDKKAKAVSFKNRAISAGNKFRRSLRRKRRRRVGDHVASIEDIRDVK ELEAVQRFHQCLHDEGLLPERHDDYHVMLRFLKARKFDIDKAKHMWSEMLRWRKEFGA DNIEEFDYSELDDVLECYPQFYHGVDKEGRPVYIELIGKVDPNKLVQVTTIDRYVKYH VKESEKCLQMRFPACSIAAKRHIDSCSTILDVQGVGLKNFSKDARELIMRLQKINNDN YPETLHRLYIINAGQGFKMLWGTIKSFLDPQTASKIHVLGSKYQNKLLETIDESELPD FLGGKCRCEEHGGCIKSDKGPWKDPDIIKRVLNGEANYGRKILAISSVDGKKICYINP RHLTKKCSDASAESSSEMEDVSSPIASVNPIINPHLTPVDESKLPGNTSTSGAPPRVE DIPVVDKAVDTCAGPSTSSMAFNSDSFSLRNITMELGGLRNRITAWLIVLIVSFVAVL RSVPSRVTASLSSQAISRENSTHSSVLRRLGELEEKLQELEAKQSQMPPDREELLNGA IHRVDALEAELISTKKMLYDALMRLDELLAYADQQKNIQFRKKRFCF</aaseq>

Gene Sequence

<dnaseqindica>4722..4742#4120..4194#3692..3858#3458..3613#2919..3042#2591..2701#2407..2505#2200..2299#2074..2123#1892..1993#1668..1745#1323..1589#1133..1229#705..1008#4..268#ccgatgaaaagaaaacagaagcttctcttcccctctcccccaaaacaaaagcatcaaaatattcctcctaaatcaaaagaaaaacaatcaatttcaaacgagccatctctctccattctcgtgcccctcctgtctccgcgcattcctccgccggaaaccctggttcatcggcgagcggcgaggctcggggactcgattaccctgcgaggaatcgaggtcggaccgcgggtggggaaggcgaagatggcggggtccatcgatcggccctgtgagtgcgaactgtttcccttcttccttcgactgcgtgttccctgatgattcgttgtttctccatgccgccatgcgttgcccgttctcgtttatgcaatgcttacctgcttgtcattcgcgaacaccggaaaattgcggttgcagagagattgattctgtgagggggttcattggggcaagtggagaacatggcaaatcactcggaaatagacaaatagttcatgttcgagtgggattgaaattttaatagtagtagtttagcacctgtagagattataatcacacctccctaatttttttaacgtgcgtgtaattgcgctgctttcagttaattgcaactcctatgtactctgctctcgtattgattattttcaatgtagttgttaccatttcaacctgattaggaggaggggcatttcgttgaaactatatagcaggtgcaggttttgaaggcattgtgcatgatgatgataagaaagagtggaaatccgatgaggacaactcagaaggtgacaaaaaggccaaggcagtctccttcaagaaccgagctatcagtgctggaaataaatttaggcgttccttgagaaggaagagaagaaggagggtcggcgaccatgtagcctctatagaggacataagggatgtcaaggagctggaagctgtccaaagatttcaccagtgcttacatgatgagggcttgttgccagaacgtcatgatgattatcacgtgatgttgaggtgcaatttttttctgatctcagagtcacagttacttggatttctccttactcctgcagaaaattcagcgttgcttatttgatttaaaatttcttcatgtgcctatgacatgttacacatgtaggttcctgaaagcgcgaaaatttgatattgataaagcaaaacatatgtggtcggaaatgcttagatggaggaaggagttcggggctgacaacatagaggtaaagcagagactggaccatatgctccagtacgtaggtagtgatagtctttcttcatgtaacttctggaagtttgacatctggatcatttaggaatttgactatagcgaattagatgatgttctggagtgctatccacaattttaccatggtgtggataaagagggaaggcctgtctacatagaactaattggaaaagttgatcccaacaaattagtacaagtcacaactattgacagatatgtaaagtatcatgtcaaggagtccgagaagtgcttgcagatgaggtttccagcttgctccattgctgcaaaaaggcacatagattcgtgcagtactatcttggatgtgcaaggagtggtatgttattttatagccaatcttgctatcgccaaaatttctgggtagattagtagttaacttgttttttatgtgaagggtttgaagaacttctcaaaagatgcaagagagctaatcatgcgacttcagaagatcaacaatgacaactatccagaggtaggtgattccattatgttttaatgttatttttcactattgccctttcacttcgttttttgtcactatatacatttctatagaacttgtttttatctggggtcataacaaaggacttatctaatacctttctagtgctcgtgcagaccttgcaccgattgtacattataaatgctggccaaggcttcaagatgttatggggtacaataaaatcatttcttgatccacaaactgcttcgaagattcatgtaagtattgaaaattgttattcagaataatatttacttctagtatgtgataatagccttatctgtcttttttcacctaggtccttggaagcaaataccaaaataagctacttgaaactattgatgagaggttaggtcttttctactgtcacaaatactgtagtttggttcctatcctaataattttgtttaattcatgttttcagtgaacttccagattttctgggtggcaaatgcaggtgtgaagaacatggaggttgcataaaatcagataaaggtccttggaaggatcctgacataataaaggtcttccactcttcctgaaccctacccttcttcttattcatcctgtacacctttttttttttgaaaagaaatcctgtacactaaaataatgtgtctatgattttcagagggtccttaatggtgaagcaaactatggacggaaaattcttgctatatcaagcgttgatgggaagaaaatatgttatattaaccctagacacttaactgtaagcatgctttgaatggagattactcatacatcatcttaaaataacaactatccgttagaagcttgattctatcccctcgcagaaaaaatgcagcgatgcctctgctgagtctagttctgaaatggaagatgtttcatctcctatagcttcagttaaccccatcataaaccctcatttgacacccgttgacgaggcaagatcttgtaccttttggttttttcaactgcacgaggctgatattaatgattagtactcgttctattggtcttttcaactgcacaaggctgagctcagattactgattagtactcgctctaaacaatgatgtggcattcttaattttcttcctccttaatcaatctttatgttggtaaatatgatcataaatgcatctttttatatttctgcagtccaaattgccgggaaatacttccacatctggtgcccctcccagagtagaggacatccctgttgttgacaaggctgtggacacatgcgccggtccatcaaccagctcaatggcttttaattcaggtctttatatgacaccttcatacttgtacctcttattgagaagttgtctacttgctgatttcaaacattcgtacccccatatgcaactagggaaatgtgagatactgggaattttgttggccgtttggtttgaggaatcaaactatctagaatgggtgatccatcatgggaccatctctcaaatctagtggaatgactccatttctcagtttctcatttagtatgtactttttagagatgatggacaaatccattccattcctcaaaccaagcgacctgtataagatcaagtggtcatctcattcctcaaaccaaacatgccattacattatagtatgtagtgagtggtgaccggtaagcccaccaagagtttattggagtgattttgactgagtttgttgcatgttttacacagattcgttctcgttgagaaacataacgatggaactgggaggacttcgaaatcgaattactgcgtggttgatagtcttaatcgtgagctttgttgccgtgcttcgttctgtcccaagcagagtgactgcaagtctatcaagccaggccatttcccgtggtaactatagtgctgagttccctcaagaaattgagtttttggaagagttttgacctccatcttctcccggattcacagaaaacagtacacattcgtctgtattgagacgtcttggtgaattggaggagaaattacaggagcttgaagcaaagcaatctcaaatgccaccggatagagaggaattgctcaatggagccattcaccgtgttgatgcattggaagccgagctaatatctacaaagaaggtactgttgagtcttgacatatcatatgcactctgtgggtgtgcatgtgtgacaaggaagatgtactctcgttagatagcttattgcttagtggtatcaaggatataactactgttctgaggtaatgtttctatatgttatactattacacccaagaattggcagttcaccgaatttcttgattgttcgctatagtaagaactaagaactgaacaaaaaattgcgattttccatattgacctttgtttctcccatgagcagatgctttatgatgcattgatgaggctggacgaactgcttgcatacgccgaccagcaaaagaatattcaatttcgggtaagttgtggatttttcctatgaattactctttccttttgagaaatgcttgttcttgatgccaactactctttagttatggatgtgagtgagttcacccagaagtacctattgacccgctagtttatataaaaatgaatttattctttgttgctaagtgtgtgtttttttaagttaaactagattgagtcaaagggaacttcatgatttggttcgcacacatccctgttctatcgtactccctctgtttttaaatatatgacgccattaatgtttaacatacgttaaccattcgttttattaaaaaaagtgtaaatataaaaaatataagttatgcttgaagtatctttaataaaaaaataaatcataacaaaataaataatacttgcatagttttcttaataagatgaatggtcaaccatatatctaaaagtcaacaacatcatatagtattaggaaaaaaaatgtaaagaatatctcataacactgagctagccaattcatatgtgttcatccattatatgcagaaaaagaggttctgcttctaagtaccagagtggcttgcttgcttttctcctcgaaggtttcgtgttcttctgtcaactgaatacttgtaagttggactctttgtccaattttaaaactgtgaatattttgttcagccgtgtatctctgaatattaaagaaagaaagaaaggtgggtggtcactttgccacctatttgactt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0701900, RefSeq:Os01g0701900