Difference between revisions of "Os01g0719700"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os01g0719700| Description = Similar to [4Fe-4S] cluster assembly factor| Version = NM_001050621.2 GI:297597514 GeneID:4324700| Length = 3367 bp|...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0719700|
 
GeneName = Os01g0719700|

Revision as of 18:57, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0719700

Description

Similar to [4Fe-4S] cluster assembly factor

Version

NM_001050621.2 GI:297597514 GeneID:4324700

Length

3367 bp

Definition

Oryza sativa Japonica Group Os01g0719700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:31764250..31767616

Sequence Coding Region

31764250..31764340,31764471..31764587,31764687..31764817,31764908..31764958,31765227..31765277
,31765452..31765595,31765670..31765812,31765964..31766036,31766128..31766223
,31766325..31766423,31766493..31766546,31766620..31766743,31767008..31767132
,31767308..31767430,31767536..31767616

Expression

GEO Profiles:Os01g0719700

Genome Context

<gbrowseImage1> name=NC_008394:31764250..31767616 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:31764250..31767616 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcggaacctccgcgccgccgcgcctgcctccttcctcgcgccgcccgcgccccctctcctcctccccccgtcgactccaaccccgcgaggcgccttctcggcgaaggcttctcctgccgcggcggccgcccaggcgcatggctggtgcccctcgccgcggcgcgtgggccggctccggcggcgcgcgggagccgcttcgtcgagcgtggcgtcggtggaggacgccaagaaggacgtgctcgtggcgctctcccaaatcatcgatcccgacttcgggacggacatcgtctcgtgcgggttcgtcaaggacctggagattagcgaggccttggaagaggtctcgtttcgtctggagctgacgactcctgcctgcccgatcaaggacatgtttgaagagaaggcaaatgaggttgttgcagcacttccttgggtcaagaagggaggagttggaaagtctacagttgctgtaaatcttgcatatacattagctggtatgggggccagggttggaatatttgatgctgatgtcttcggtccgagcttaccaactatggtttctcctgaaaaccggctgctagtgatgaacccagaaagcagaagtattcttccaaccgagtatttgggcgtcaagatggtgtcttttggctttgctggacaaggaagagctataatgcgtggtccaatggtttcgggagtgattaatcagttgctgaccactactgattggggcgaactcgactaccttgtcattgacatgcctccaggaacaggagatatacacttaacactctgtcaggtggtagccccattgactgcagctgtcattgttaccacccctcagaagcttgctttcatcgatgttgcaaagggagttagaatgttttccaagctgaaggttccgtgcgttgcagttgttgagaacatgtgctacttcgatgctgatggaaaacgattttacccatttgggcaaggttctggagctcaggcaagaaaagttgtgcagcagtttggaatacctcacctcttcgatttgccgatacggccaactctttcagcgtctggagatactggaattcctgaagtagtggctgatccacaaggggatgttgctaagacgtttcagaatcttggagtttgtgttgttcagcagtgtgctaaaatcagacaacaggtttcaacagcagtttcctatgatagatcaattagagcaatccgagtgaaagtaccagattcagatgaagagttcttgttgcatccagcaacagtcagaaggaatgaccgatctgctcaaagtgtggacgaatggacaggtgagcagaaagtacaatatggtgatataccagaagacattgaacctgaagagatccgtcctatgggaaactacgcagtttctataacttggcctgatggtttttctcagatagcaccttatgatcaattggaaatgcttgagaggcttgtggatgttcctcgtgcaacaacagcagcagtctcttcatga</cdnaseq>

Protein Sequence

<aaseq>MRNLRAAAPASFLAPPAPPLLLPPSTPTPRGAFSAKASPAAAAA QAHGWCPSPRRVGRLRRRAGAASSSVASVEDAKKDVLVALSQIIDPDFGTDIVSCGFV KDLEISEALEEVSFRLELTTPACPIKDMFEEKANEVVAALPWVKKGGVGKSTVAVNLA YTLAGMGARVGIFDADVFGPSLPTMVSPENRLLVMNPESRSILPTEYLGVKMVSFGFA GQGRAIMRGPMVSGVINQLLTTTDWGELDYLVIDMPPGTGDIHLTLCQVVAPLTAAVI VTTPQKLAFIDVAKGVRMFSKLKVPCVAVVENMCYFDADGKRFYPFGQGSGAQARKVV QQFGIPHLFDLPIRPTLSASGDTGIPEVVADPQGDVAKTFQNLGVCVVQQCAKIRQQV STAVSYDRSIRAIRVKVPDSDEEFLLHPATVRRNDRSAQSVDEWTGEQKVQYGDIPED IEPEEIRPMGNYAVSITWPDGFSQIAPYDQLEMLERLVDVPRATTAAVSS</aaseq>

Gene Sequence

<dnaseqindica>1..91#222..338#438..568#659..709#978..1028#1203..1346#1421..1563#1715..1787#1879..1974#2076..2174#2244..2297#2371..2494#2759..2883#3059..3181#3287..3367#atgcggaacctccgcgccgccgcgcctgcctccttcctcgcgccgcccgcgccccctctcctcctccccccgtcgactccaaccccgcgaggtgagcgcacacggcggttggatggttgccttgtctcgcgttcagcttctactccgtgctcatgctctgacgcgcccgagcaggggctctcaccggcgagctaactccacggatttcatggttcttgcaggcgccttctcggcgaaggcttctcctgccgcggcggccgcccaggcgcatggctggtgcccctcgccgcggcgcgtgggccggctccggcggcgcgcgggagccgcttcgtcgagcggtaaccttcgtcagtcggaactcctctcagcaaactgcgaaatttgttttacgtttgtgtgtgctttccatttgattttcgaactggtgtgtgtggcagtggcgtcggtggaggacgccaagaaggacgtgctcgtggcgctctcccaaatcatcgatcccgacttcgggacggacatcgtctcgtgcgggttcgtcaaggacctggagattagcgaggccttggaagaggttaagttgaaggacacttgctgatgaagcctggatgcactgctcgaacatttggcttactttggtctccatttggctctgctttttcaggtctcgtttcgtctggagctgacgactcctgcctgcccgatcaaggacatggtgagtacagttcctgtgttgacgtgttcagttatctccgtggaactattcactctttatcttcagttgtctcaaacaaaatagcagtaactatattggttttgagataatagtatcggttaagcttatcattggcatctgatgagatagatgtataaatgtgaactgattggtttatactcctatctgtttgtaaaaatgctgtcctatcctgggttggaaaaacaatttgcggcaaaattgcatgaagacttgttttgctttgtagtttgaagagaaggcaaatgaggttgttgcagcacttccttgggtcaagaaggtcaatgttacaatgtctgcgcaacctgcacgaccagcatacgcaggggagcttccagaaggattgcagaagatttcgaatatcatagcagtttcaagctgcaaggcaagacctcaggataataataaatcagtcctttttagtagtaagtaactaaaaaacattttttcccagggaggagttggaaagtctacagttgctgtaaatcttgcatatacattagctggtatgggggccagggttggaatatttgatgctgatgtcttcggtccgagcttaccaactatggtttctcctgaaaaccggctgctagtgatggtaagctgattgaataattgtgttaacaaaaaattagtggttgcactaataatggtaaacagatttacctttagaacccagaaagcagaagtattcttccaaccgagtatttgggcgtcaagatggtgtcttttggctttgctggacaaggaagagctataatgcgtggtccaatggtttcgggagtgattaatcagttgctgaccactactgattggtatgcaaaagagatacttgacatctttatgaaggcatctgatgaacataataaagcagcccatttttaccagcttagcctttcgtagattcccaataatattattgggttccgttgaaaaaacttgactttttttcttcttttcataaaggggcgaactcgactaccttgtcattgacatgcctccaggaacaggagatatacacttaacactctgtcaggtggtacctctagcctgagtattgtacaaatcacacgtggtaacatcaaccatgcttgtaggcactgtgaaatttaacatgtctgaaacatcaggtagccccattgactgcagctgtcattgttaccacccctcagaagcttgctttcatcgatgttgcaaagggagttagaatgttttccaagctgaaggtgtgtaatcttcatatcactgttcattttaattgtaatctaccgtgcttactattcgtgcatcaatttgtttctgcttcatcttcatcttctttgtgaaggttccgtgcgttgcagttgttgagaacatgtgctacttcgatgctgatggaaaacgattttacccatttgggcaaggttctggagctcaggcaagaaaagttttgatgcacatttagcacattctcttgaatattttttgaattgcgtcagcattgcaattatttcaggttgtgcagcagtttggaatacctcacctcttcgatttgccgatacggccaactgtaagctcaatcccacctatcttgtacaaggataaaagtgagtgcaatgatcacagtttggtataatttacagctttcagcgtctggagatactggaattcctgaagtagtggctgatccacaaggggatgttgctaagacgtttcagaatcttggagtttgtgttgttcagcagtgtgctaaaatcagacaacagggtaagttagcagttcacaaattacaacctagaatatgtaaaagtagttcatacaatttattttcttggtgaattcgaactaaccaaaatttaaacaaaacgaagaaagaagtataccaataaatactgccagctttcttattcccaaaaaaaataaatactgccagcttttgttcaaaaaatgtattacagcaaaacagatatgtttctttttttaccaagtttttctcctgtaatgatgtgttaatctttttcattttgccagtttcaacagcagtttcctatgatagatcaattagagcaatccgagtgaaagtaccagattcagatgaagagttcttgttgcatccagcaacagtcagaaggaatgaccgatctgctcaaagtgtggtgggtataccttttcgccgtttaatgtgtattattctaacactggcatcgacttcaaatggcgtgtacagtgcttataattttcagaaactaaatcatgtagtctgtattttcagaaaccaatattttcacagttgcccttgttttgcacaaactaagtagttcttgtctgcaggacgaatggacaggtgagcagaaagtacaatatggtgatataccagaagacattgaacctgaagagatccgtcctatgggaaactacgcagtttctataacttggcctgatggtttttctcaggtaatgtaatacaaaataaagattatttcatgtacagtagacttccgaaattcatgtagatggattaaatggagatgaaatgaacatgaatctgattctctgcagatagcaccttatgatcaattggaaatgcttgagaggcttgtggatgttcctcgtgcaacaacagcagcagtctcttcatga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0719700, RefSeq:Os01g0719700