Difference between revisions of "Os01g0730300"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os01g0730300| Description = HAD-superfamily hydrolase subfamily IIB protein| Version = NM_001050676.1 GI:115439722 GeneID:4324423| Length = 4396...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0730300|
 
GeneName = Os01g0730300|

Revision as of 18:58, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0730300

Description

HAD-superfamily hydrolase subfamily IIB protein

Version

NM_001050676.1 GI:115439722 GeneID:4324423

Length

4396 bp

Definition

Oryza sativa Japonica Group Os01g0730300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:32215853..32220248

Sequence Coding Region

32215995..32218030,32218901..32219174,32219580..32219906

Expression

GEO Profiles:Os01g0730300

Genome Context

<gbrowseImage1> name=NC_008394:32215853..32220248 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:32215853..32220248 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttctcgcgatcctacaccaacctggtcgatctcgccaacggcaacctctccgccctggactatggtggcggagggggagggggcggcggcggcaacggggccgggggccggccgccgcgggcgaggcggatgcagcggacgatgacgacgcccgggacgctggcggagctcgacgaggagcgggccgggagcgtcacctccgacgtgccctcgtcgctcgccagcgaccgcctcatcgtcgtcgccaacaccctccccgtgcgctgcgagcgccgccccgacgggcgcgggtggagcttctgctgggacgaggactccctcctcctccacctccgcgacggcctccccgatgacatggaggtcctctacgtcggctccctccgcgccgacgtgccgtccgccgagcaggacgacgtcgcgcaggcgctcctcgaccggttccgctgcgtcccggctttcctccccaaggacgtcttggacagattctaccatggcttctgcaagcagacgctgtggccgctcttccactacatgctccccttcacctccgaccatggcggccgcttcgatcgctcccagtgggaggcatacgtcctcgccaacaagctcttctcccagcgcgtcatcgaggtcctcaaccccgaggatgactacatctggatccacgattaccacctcctcgccctcccgtccttccttcgccgtcggttcaacaggctccgcatcggtttcttcctgcacagcccgttcccttcgtcggaactctaccgttccctccctgttcgcgacgagatcctcaaatcactgctaaactgcgatctgattgggttccacacctttgattacgcgcggcatttcctgtcctgctgcagccggatgctggggatcgagtaccagtcgaagaggggatatatcggtctcgattactttggccgcactgttgggataaagatcatgcctgttgggattaacatgacgcagctgcagacgcagatccggctgcctgatcttgagtggcgtgtcgccgaactccggaagcagtttgatgggaagactgtcatgctcggtgtggatgatatggacatatttaaggggattaatctgaaagttcttgcgtttgagcagatgctgaggacacacccaaaatggcagcgcaaggcagtgttggtgcagattgcaaacccaaggggtggtggtgggaaggaccttgaagagatacaggctgagattgatgagagttgcaggaggataaatgcacaattttcacggccaggatatgttcctgtggtgattatcaatagagccctttcaagtgtggagaggatggcttattataccgtggcagagtgtgtcgttgtaactgcagtgagggatgggatgaacctcacaccatatgagtatattgtctgtagacagggatttccagatttggatggttctggggatgatgggccaaggagaaagagtatgttagttgtgtccgaattcattggttgctcaccatcacttagtggagcaattcgggtaaacccttggaacattgatacaacagcagaggcaatgaacgagtcgattgctttatcagagaacgagaagcaactgcggcatgagaagcattacagatatgtcagctcacatgatgttgcctattggtccaagagctatattcatgatttggagagaagctgcagggaccattttaggaggaggtgctggggtattggactaggatttggatttagagtagttgctcttgaccgcaacttcaaaaagcttactgtggattctatcgttactgattacaagaattctaagagcagggttatactgctagactacgatggaacgctagtaccacaaactacaatcaacaggactccaaatgaaagtgttgttaaaatcatgaatgctctttgtgacgataagaagaatgttgtttttattgttagtggacgaggaagggatagccttgagaaatggttttccccttgccaggatcttggcattgctgccgaacatggctactttatgaggtggaccagagatgagcaatggcaattgaataaccagtgctcagaatttggatggatgcagatggccaagccagttatgaacctgtatacagaagcaaccgatggatcatatattgaaaccaaagagagtgctttggtctggcaccaccaagatgctgaccctggttttggatcttcacaagctaaagagatgctagatcatttggaaagtgttcttgctaatgagcctgtctgtgtaaagagtggccaacagattgtggaagtgaaaccgcagggtgtcagcaaaggatttgttgctgagaagatcctatcaacgctgacagagaacaagagacaggcagattttgttctctgcataggcgatgatagatcagacgaggatatgtttgaaggaattgctgatatcatgagaaggagcatagttgatccccaaacatcattatatgcgtgcacagtcggccagaagccaagcaaggctaagtactatttggacgatactaatgatgttttgaacatgcttgaggcgcttgcagatgcatcagaggagactgattcacaggaagatgcagaagagataacatctatcccggacccggaatag</cdnaseq>

Protein Sequence

<aaseq>MFSRSYTNLVDLANGNLSALDYGGGGGGGGGGNGAGGRPPRARR MQRTMTTPGTLAELDEERAGSVTSDVPSSLASDRLIVVANTLPVRCERRPDGRGWSFC WDEDSLLLHLRDGLPDDMEVLYVGSLRADVPSAEQDDVAQALLDRFRCVPAFLPKDVL DRFYHGFCKQTLWPLFHYMLPFTSDHGGRFDRSQWEAYVLANKLFSQRVIEVLNPEDD YIWIHDYHLLALPSFLRRRFNRLRIGFFLHSPFPSSELYRSLPVRDEILKSLLNCDLI GFHTFDYARHFLSCCSRMLGIEYQSKRGYIGLDYFGRTVGIKIMPVGINMTQLQTQIR LPDLEWRVAELRKQFDGKTVMLGVDDMDIFKGINLKVLAFEQMLRTHPKWQRKAVLVQ IANPRGGGGKDLEEIQAEIDESCRRINAQFSRPGYVPVVIINRALSSVERMAYYTVAE CVVVTAVRDGMNLTPYEYIVCRQGFPDLDGSGDDGPRRKSMLVVSEFIGCSPSLSGAI RVNPWNIDTTAEAMNESIALSENEKQLRHEKHYRYVSSHDVAYWSKSYIHDLERSCRD HFRRRCWGIGLGFGFRVVALDRNFKKLTVDSIVTDYKNSKSRVILLDYDGTLVPQTTI NRTPNESVVKIMNALCDDKKNVVFIVSGRGRDSLEKWFSPCQDLGIAAEHGYFMRWTR DEQWQLNNQCSEFGWMQMAKPVMNLYTEATDGSYIETKESALVWHHQDADPGFGSSQA KEMLDHLESVLANEPVCVKSGQQIVEVKPQGVSKGFVAEKILSTLTENKRQADFVLCI GDDRSDEDMFEGIADIMRRSIVDPQTSLYACTVGQKPSKAKYYLDDTNDVLNMLEALA DASEETDSQEDAEEITSIPDPE</aaseq>

Gene Sequence

<dnaseqindica>143..2178#3049..3322#3728..4054#attaattaatcttctttaccctgcacctgaggaggaggaatggctgatgccccaggcgattgaatcgaatcgggggaggagggggaggtggggagcgggggggaaatctgagtgatcggttgttcctcgtccgatcgccgccatgttctcgcgatcctacaccaacctggtcgatctcgccaacggcaacctctccgccctggactatggtggcggagggggagggggcggcggcggcaacggggccgggggccggccgccgcgggcgaggcggatgcagcggacgatgacgacgcccgggacgctggcggagctcgacgaggagcgggccgggagcgtcacctccgacgtgccctcgtcgctcgccagcgaccgcctcatcgtcgtcgccaacaccctccccgtgcgctgcgagcgccgccccgacgggcgcgggtggagcttctgctgggacgaggactccctcctcctccacctccgcgacggcctccccgatgacatggaggtcctctacgtcggctccctccgcgccgacgtgccgtccgccgagcaggacgacgtcgcgcaggcgctcctcgaccggttccgctgcgtcccggctttcctccccaaggacgtcttggacagattctaccatggcttctgcaagcagacgctgtggccgctcttccactacatgctccccttcacctccgaccatggcggccgcttcgatcgctcccagtgggaggcatacgtcctcgccaacaagctcttctcccagcgcgtcatcgaggtcctcaaccccgaggatgactacatctggatccacgattaccacctcctcgccctcccgtccttccttcgccgtcggttcaacaggctccgcatcggtttcttcctgcacagcccgttcccttcgtcggaactctaccgttccctccctgttcgcgacgagatcctcaaatcactgctaaactgcgatctgattgggttccacacctttgattacgcgcggcatttcctgtcctgctgcagccggatgctggggatcgagtaccagtcgaagaggggatatatcggtctcgattactttggccgcactgttgggataaagatcatgcctgttgggattaacatgacgcagctgcagacgcagatccggctgcctgatcttgagtggcgtgtcgccgaactccggaagcagtttgatgggaagactgtcatgctcggtgtggatgatatggacatatttaaggggattaatctgaaagttcttgcgtttgagcagatgctgaggacacacccaaaatggcagcgcaaggcagtgttggtgcagattgcaaacccaaggggtggtggtgggaaggaccttgaagagatacaggctgagattgatgagagttgcaggaggataaatgcacaattttcacggccaggatatgttcctgtggtgattatcaatagagccctttcaagtgtggagaggatggcttattataccgtggcagagtgtgtcgttgtaactgcagtgagggatgggatgaacctcacaccatatgagtatattgtctgtagacagggatttccagatttggatggttctggggatgatgggccaaggagaaagagtatgttagttgtgtccgaattcattggttgctcaccatcacttagtggagcaattcgggtaaacccttggaacattgatacaacagcagaggcaatgaacgagtcgattgctttatcagagaacgagaagcaactgcggcatgagaagcattacagatatgtcagctcacatgatgttgcctattggtccaagagctatattcatgatttggagagaagctgcagggaccattttaggaggaggtgctggggtattggactaggatttggatttagagtagttgctcttgaccgcaacttcaaaaagcttactgtggattctatcgttactgattacaagaattctaagagcagggttatactgctagactacgatggaacgctagtaccacaaactacaatcaacaggactccaaatgaaagtgttgttaaaatcatgaatgctctttgtgacgataagaagaatgttgtttttattgttagtggacgaggaagggatagccttgagaaatggttttccccttgccaggatcttggcattgctgccgaacatggctactttatgaggtatgtcccaacttgttttttttttttcacatatttcaatcggtacattaccattctttagtgggtcttgattggttttgtgccctctggcatagttgttatataatgctgtgtagtatgcctggtgataggttgcctgtatcaaatccctttgctgttattttttgtaaaacatattagatgattactatattgtagcatgtgatgtgctgacattgaagagtgatcatgtgaacagactacttcaaagctcttgtcataacccaagattttgatgataaacatttattgaactttcttatatgagcaacatgtataaatgattttttttgtgtagaatatgctaaggaataacaaaagtatttgtggtatatattttttttattcactgattcatatggtttatgtgtcaatttgatgaagatgttaccacttgctacatcaacagatcaactcatcaaaaacatcaactagaataggaacctaaaattctaacatgttaagtaggttagcctaacacatttaacattgtgggagttgtgacattgatcatgaaagcgctcacattttagggttttagaagctgtaacagtatatagttggtcactatcacttgtgattccatcagttggcagtgattaattaacattcataggaacacactaaaatgcatttcttgaaattccaattcgttatcctgcattccagaaattcttctttgtgaaatcgagcaaagtacagcctgaaaattttgcatgcgttgatggtcttacattattgttcatgcttatgacggttaattcatcgaaaacattttacttctttagcaagtttttatcaaattctcatcagctaccctctcttctgtaggtggaccagagatgagcaatggcaattgaataaccagtgctcagaatttggatggatgcagatggccaagccagttatgaacctgtatacagaagcaaccgatggatcatatattgaaaccaaagagagtgctttggtctggcaccaccaagatgctgaccctggttttggatcttcacaagctaaagagatgctagatcatttggaaagtgttcttgctaatgagcctgtctgtgtaaagagtggccaacagattgtggaagtgaaaccgcaggtatttcatttctcacacatcatccatctacttttgtggtgttggcattgataattattgtgtcaactaattttgcttactacttataaggaacccttagaaggtgcaatatacttctagtaatgatgaatggtttcatcattactctgtttttttacatgttgaaattgtaactctgctttgatctactgtgattatgagttcatagcaatagcatccaaatccaatgcatgatagtacatgatgtggtgtggtgggcaacagggatagtgaatctgtgagtgcttaacttttataggataggagttgcactagaaaaaaaaaaggtccgattttttgtctaccaacaacaatttacttatcttgctacttcagagtttacattcttgctttgttgtattgcagggtgtcagcaaaggatttgttgctgagaagatcctatcaacgctgacagagaacaagagacaggcagattttgttctctgcataggcgatgatagatcagacgaggatatgtttgaaggaattgctgatatcatgagaaggagcatagttgatccccaaacatcattatatgcgtgcacagtcggccagaagccaagcaaggctaagtactatttggacgatactaatgatgttttgaacatgcttgaggcgcttgcagatgcatcagaggagactgattcacaggaagatgcagaagagataacatctatcccggacccggaataggcgtgatgatgttttaaatctcctggtgatgtcaatgcgtcaattgccaccagcagtcttcctgactaaaattgaagctgattgccatcagcaggaagtgcaactttagtaatactcagttagacaaatcaatgtcaataatcttagcgctgctcgattttctgccatttttctgatttctcttatgatagttttggagtaattctcataatattggtagatagaaaggagcctggggggaaagaatccatggcgtagtacatcatttttcttttaccttgcttgttaggtacagtatggaagattggagtatttgcgggagtacaagtcggaaatttggtg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0730300, RefSeq:Os01g0730300