Difference between revisions of "Os01g0730500"

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(Created page with "{{JaponicaGene| GeneName = Os01g0730500| Description = Similar to Ferredoxin (Bacterial type ferredoxin family)| Version = NM_001050678.1 GI:115439726 GeneID:4324425| Leng...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0730500|
 
GeneName = Os01g0730500|

Revision as of 18:58, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0730500

Description

Similar to Ferredoxin (Bacterial type ferredoxin family)

Version

NM_001050678.1 GI:115439726 GeneID:4324425

Length

2613 bp

Definition

Oryza sativa Japonica Group Os01g0730500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:32228439..32231051

Sequence Coding Region

32228544..32228798,32228989..32229117,32229219..32229348,32229449..32229569,32229699..32229780
,32229922..32229972,32230239..32230277,32230424..32230517,32230634..32230761

Expression

GEO Profiles:Os01g0730500

Genome Context

<gbrowseImage1> name=NC_008394:32228439..32231051 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:32228439..32231051 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctcctctcctgtcaccaccgctgcttgccgactcggttgccaagttccattgctcctccacacccaccccctgctccggcagtgtccggcgatgggcaatcacaaggttcgccggggccgggaggaggagagactggcaccggagacggcggacgtccggaaggggggtcctgacggtttccgcggtggcggcggagtcgcccagctccggtggtggcgtcgccgaagactactacgctgttcttggcgttatgccggatgcaacacctcagcagatcaagaaagcgtactacaattgcatgaaagcatgccatcctgatctcagtggcaatgaccccgatgtgacgaacttctgcatgttcatcaatgaagtttacacggtacttaccgatcccatccagcgagcggtgtatgatgagattcatggctatgccgcaacagcaaccaaccccttcttcgatgacagtgcccctagggatcatgtgtttgtcgatgagtttagctgcataggatgtaaaaactgtgctaatgtgtgttctaaggtcttcgaaattgaggaagattttggtcgggcaagagtttacaatcaatcaggcaatgccgaactaattcaagaagctattgacacttgtccagttgactgcatccattggacatcagctgcacaactttcactccttgaagatgaaatgcgaagagtagaaagagtgaatgttggtttgatgctagctgggatgggaagttcagttgatgtgtttcggatggcaagtacacgatgggagaaaagacaggctaaagtcttggaaaaggtcagaagacgtgtgagccaagaagattctggtaagggcagctcatggagtgatgtctggggagcaccaacaagatatcgaaagaacgaggacgaagcaagggagagagcaaagcgagcagcggcggcagcgaggaggtggagagaatactcgaggaaaggtgcagacaagcctcccacattcaaacttccagaggcagtgtccaacaaggagtga</cdnaseq>

Protein Sequence

<aaseq>MAPLLSPPLLADSVAKFHCSSTPTPCSGSVRRWAITRFAGAGRR RDWHRRRRTSGRGVLTVSAVAAESPSSGGGVAEDYYAVLGVMPDATPQQIKKAYYNCM KACHPDLSGNDPDVTNFCMFINEVYTVLTDPIQRAVYDEIHGYAATATNPFFDDSAPR DHVFVDEFSCIGCKNCANVCSKVFEIEEDFGRARVYNQSGNAELIQEAIDTCPVDCIH WTSAAQLSLLEDEMRRVERVNVGLMLAGMGSSVDVFRMASTRWEKRQAKVLEKVRRRV SQEDSGKGSSWSDVWGAPTRYRKNEDEARERAKRAAAAARRWREYSRKGADKPPTFKL PEAVSNKE</aaseq>

Gene Sequence

<dnaseqindica>106..360#551..679#781..910#1011..1131#1261..1342#1484..1534#1801..1839#1986..2079#2196..2323#agagcaacaatccccgttaccccacgggatccaaccggattctccttgtccttctcccttcctccctcgccggagcccgatcgaaggtacgccgcttcccatcggatggctcctctcctgtcaccaccgctgcttgccgactcggttgccaagttccattgctcctccacacccaccccctgctccggcagtgtccggcgatgggcaatcacaaggttcgccggggccgggaggaggagagactggcaccggagacggcggacgtccggaaggggggtcctgacggtttccgcggtggcggcggagtcgcccagctccggtggtggcgtcgccgaagactactacgctgttcttggcgttgtaagtttgattttccattttctgtgcattaaacccatattacctattttcagtttttctctgttttattttctatactttggaattgttagaaaagaatggtagatggtacatatatattgcattattcagtattcacagttctgcagaataccgagaagttaatgaattcaactttcaatgctttcagatgccggatgcaacacctcagcagatcaagaaagcgtactacaattgcatgaaagcatgccatcctgatctcagtggcaatgaccccgatgtgacgaacttctgcatgttcatcaatgaagtttacacggtaatctggactctacagagatcgaagtctgctgctttttggagcattctgtatgttttaaaaatttatatgcgaaattaacatgagcaagggactggcaggtacttaccgatcccatccagcgagcggtgtatgatgagattcatggctatgccgcaacagcaaccaaccccttcttcgatgacagtgcccctagggatcatgtgtttgtcgatgagtttagctgcataggtattattaactactatataaccaaacaggagtttatcctagtctatgtactctttggtagttattggcttctatttaatttcttcacgcatttatacaggatgtaaaaactgtgctaatgtgtgttctaaggtcttcgaaattgaggaagattttggtcgggcaagagtttacaatcaatcaggcaatgccgaactaattcaagaagctattgacacttggtgagattgttgaatttcaaaattttgctaaaaaaaggaaaaaatgttacaagtttgctgaacaaatttcagtgtttcccccatttgtatgctagactaatattactgctctgaatttctgatacgcagtccagttgactgcatccattggacatcagctgcacaactttcactccttgaagatgaaatgcgaagagtagaaagagtgaatgtaaggaaaacatcaaagatatttccaataacctcatgtctatcggtctatcaggcagtagtttatatgtttgttatttccaaacctgccagattgtgatatcttgcaaaagcatattatttttttcttccatttgagcaggttggtttgatgctagctgggatgggaagttcagttgatgtgtttcggatggtaatttcctagtacttaatttgtaattttattatccattctagtaccattctagtactattctgtacttttgcaacactccacactgtcaattcaaaacatggcataagttcatcggaaaagaacagattttttttttcttttgcatccagaagtagatactcctacctggtacagtagactagtacggtgtggattttctgaagtttgagccaccgtttcttcagaaagtccttaatttgttttttatcttctctgtctgccaggcaagtacacgatgggagaaaagacaggctaaagtcttggtataattctctgtttcaatacattgctttctttagacaaacataagaaataataatttaagatttttaggatgaaccttcgttactcctatttcattgtagtatgtaaactgtctgtttttctttgaaacctgtctgtcttgtaggaaaaggtcagaagacgtgtgagccaagaagattctggtaagggcagctcatggagtgatgtctggggagcaccaacaagatatcgaaagaacggtaaagctagcgtaatttgccattggcaattgctactaatttgctcataccatttggattcccatccagtacccacatagccgtcttcttaactctcctgctaacacattgagcagaggacgaagcaagggagagagcaaagcgagcagcggcggcagcgaggaggtggagagaatactcgaggaaaggtgcagacaagcctcccacattcaaacttccagaggcagtgtccaacaaggagtgagagaacagaacacaatcaaatgagaatttttatcaaagcagtgctacctaaccccattgaaatcatgtatagtctaattatttgcagagagctgtatagcatttatgctctctcgccctccattccacatgatgaccaatatcttccaatattctgcttgagatagttggtgttggtcaccatatagaatacagaactacagattccaagtgtagaaagatactgtaccattgctactcatacagttatgtacttatgttatgatgaaacttagaaacttggtttatact</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0730500, RefSeq:Os01g0730500