Difference between revisions of "Os01g0769200"

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(Created page with "{{JaponicaGene| GeneName = Os01g0769200| Description = Proteinase inhibitor, propeptide domain containing protein| Version = NM_001050906.1 GI:115440182 GeneID:4325596| Le...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0769200|
 
GeneName = Os01g0769200|

Revision as of 18:59, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0769200

Description

Proteinase inhibitor, propeptide domain containing protein

Version

NM_001050906.1 GI:115440182 GeneID:4325596

Length

5588 bp

Definition

Oryza sativa Japonica Group Os01g0769200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:34206763..34212350

Sequence Coding Region

34207063..34207310,34207747..34207900,34208351..34208748,34209064..34209159,34209238..34209310
,34209442..34209724,34209813..34210144,34210230..34210500,34211090..34211371
,34211694..34212106

Expression

GEO Profiles:Os01g0769200

Genome Context

<gbrowseImage1> name=NC_008394:34206763..34212350 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:34206763..34212350 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggttgggcgtggcggagggagcagtgggcggttgcatggctgtccgtggcggttcttggggcggcgctggtgggcgccgctggcgcgttcgaggagggcacggcggtgtacattgtgaccatgaagcaggcgccggtgttccacaagcgcctcgacctggagaggtttgggagcagcagagtcgccggcggcggcggcggcggcgggggggacaccccgtccactagcatcctcatgaagccaaggcatggtccagcccaacctatgaattatggctcgtacttagttcgtcttcaaaattcactcttgaagagaacactgagaggagagcgctatataaagctctacagctaccgctatctgattaatggttttgctgttgtcatcactcctcagcaggcagagaggctatctatgacgaaagaagtggcaaatgtaatgttggacttctcagttaggacggcaacaactcatacccctgaattccttggtttgccacaaggagcatgggttcaagagggtggcccacaatgtgctggtcagggtgttgttgttggcctcatcgacacaggaatcgatccaactcatcccagcttcgcagacgacttgataactgacagttatcctgttcctgctcattactctggcatttgcgaggttacaaatgattttccatctggatcctgcaacagaaaacttgtgggagctaggcattttgcagcctctgcaataaccaggggagtgttcaatgcctctcaagatcatgcttcaccttctgatagtgatggtcatgggacccatacagcatccatagcagctggtaatcatggaattcctgttgttgtggctgggcatcattttgggaatgcaagtggaatggctcctcgtgcacacattgctgtctataaagctctgtacaaaagctttggagggtttgctgctgatgtagtagctgcaatagatcaggcagctgaagataatgttgatataatcagcttatccattaccccaaatagaaggcctcctggactagccaccttctttaatccaattgacatggctcttctttcagctgtaaaagctggcatatttgtcgtgcaagctgcaggaaatacaggtccttcccccaagagcatgtcatcatacagtccatggatttttactgtaggagcatctgcccatgacagggaatacaacaactatgttgtacttggcaacaatctgaccattacaggagttggccttgctcctggaacagatggtgattccatgttcactctagttgctgcacctcatgcactgaaaaacaatgtagccagtcctactgaaatgtccctaggggagtgccaagattcaagccaccttgatgaagatctgataaggggaaagatactggtctgcagctattccatacgatttgtacttggcctgtcgtctgtgaagcaagctttagatactgcaaagaatgtcagtgctgcaggagttatattctatctggatccatttgtcattggattccagctgaatccaactccaatggatatgcctggacttataataccatcatctgatgactctaaggtatttctaaattattacaatgagtcccttgtgagagatgagacctcaaacaaaatcgtcagctttggtgcaattgcaaaaatactaggaggccaaaatccaaattatggtatttctgccccaaaagtaatgttttattctgccaggggtcctgatcctgaggacaactcactggccaatgctgatatcctgaagccaaatctgatagcacctggcagttccatttggggtgcttggagttctcttggattggactctgctgaatttgctggtgaaagttttgcaataatttccggtacaagtatggctgcaccacacgttgctgggcttgctgctctagtcaagcagaagttcccttattttagccctgcagctataggttctgcattatcgactactacaagtctcagtgacagggaggggaatccaatcatggcacagagaacatacggcaatccaaattcaactcaatctccagctacaccttttgacatgggaaatggatttgtcaatgctactgctgctttggatcctgggctcatatttgattccagttacgacgacttcttctcctttctatgtggcataaacggctctgctccagtagtgatgaattacaccggcaacagctgcagctcctccgccatgacaggggctgatctgaacctcccctccatcaccattgcagtgctcaaccagtcaagaacgataacaagaactgtaaccaacgtggcgagcgacgagcgctacacggtcagttacagcgccccttacggggtcgccgtctccgcgtcgccggcccagttcttcatccccagcgggcagaggcagcaggtgaccttcgtcgtcaacgccaccatgaacggcacctccgcgagcttcggcagcgtcggcttctacggcgacaagggccaccgggtgatgatcccgttctcagttatctccaaggttgtgcaccgttcatga</cdnaseq>

Protein Sequence

<aaseq>MGWAWRREQWAVAWLSVAVLGAALVGAAGAFEEGTAVYIVTMKQ APVFHKRLDLERFGSSRVAGGGGGGGGDTPSTSILMKPRHGPAQPMNYGSYLVRLQNS LLKRTLRGERYIKLYSYRYLINGFAVVITPQQAERLSMTKEVANVMLDFSVRTATTHT PEFLGLPQGAWVQEGGPQCAGQGVVVGLIDTGIDPTHPSFADDLITDSYPVPAHYSGI CEVTNDFPSGSCNRKLVGARHFAASAITRGVFNASQDHASPSDSDGHGTHTASIAAGN HGIPVVVAGHHFGNASGMAPRAHIAVYKALYKSFGGFAADVVAAIDQAAEDNVDIISL SITPNRRPPGLATFFNPIDMALLSAVKAGIFVVQAAGNTGPSPKSMSSYSPWIFTVGA SAHDREYNNYVVLGNNLTITGVGLAPGTDGDSMFTLVAAPHALKNNVASPTEMSLGEC QDSSHLDEDLIRGKILVCSYSIRFVLGLSSVKQALDTAKNVSAAGVIFYLDPFVIGFQ LNPTPMDMPGLIIPSSDDSKVFLNYYNESLVRDETSNKIVSFGAIAKILGGQNPNYGI SAPKVMFYSARGPDPEDNSLANADILKPNLIAPGSSIWGAWSSLGLDSAEFAGESFAI ISGTSMAAPHVAGLAALVKQKFPYFSPAAIGSALSTTTSLSDREGNPIMAQRTYGNPN STQSPATPFDMGNGFVNATAALDPGLIFDSSYDDFFSFLCGINGSAPVVMNYTGNSCS SSAMTGADLNLPSITIAVLNQSRTITRTVTNVASDERYTVSYSAPYGVAVSASPAQFF IPSGQRQQVTFVVNATMNGTSASFGSVGFYGDKGHRVMIPFSVISKVVHRS</aaseq>

Gene Sequence

<dnaseqindica>301..548#985..1138#1589..1986#2302..2397#2476..2548#2680..2962#3051..3382#3468..3738#4328..4609#4932..5344#gccgcagctcagcctcagtgcaacccactcgctctctctcactctcgccgcggcttaaagcgcacacggcacggcgggggcggcggccacttccacatcgccattaatgagcctggagcaagccccataggccgtagtagtagtgctactagcttcatcagctccacctcgctcggaagagatcgtctcgtcgagcgaggccctttttgctcccccaatggattcttgccgcagctagtgtttcttggcgattcttgcggcgctttgggagctgaccggtgaagagctctctttgaggcgatgggttgggcgtggcggagggagcagtgggcggttgcatggctgtccgtggcggttcttggggcggcgctggtgggcgccgctggcgcgttcgaggagggcacggcggtgtacattgtgaccatgaagcaggcgccggtgttccacaagcgcctcgacctggagaggtttgggagcagcagagtcgccggcggcggcggcggcggcgggggggacaccccgtccactagcatcctcatgaagccaaggtttttgatggtttattactcctctatgatttggttttgctctatctttacagtttatgcgaaatatgtatgtacgattcagtttgggtgagaatctctccttttgggggaggagtttttgggtgattttgattggtctatagtgaaatgttagagatgctacgtcattatctgccgacagctcggttcattggtgtagttgctgctaatattgggaaggctaacccactattgcagtagaaatgtttggtttttttaacacacaaaagatatggaatttaataccaacatgaacaatgtgtgtgcggctgtgctgctagcgtgctattgatgattctgtactttactgtttatctgacaagtttttagcaagtattttcccttgcttgtcacaaattaagttttcgtttttttgctcaccagtgttgtaatgcaggcatggtccagcccaacctatgaattatggctcgtacttagttcgtcttcaaaattcactcttgaagagaacactgagaggagagcgctatataaagctctacagctaccgctatctgattaatggttttgctgttgtcatcactcctcagcaggtatcatttttttctttgattccaccacttttgcacctttgttctgtaacgtcacattacaagtttttttaagttgcatttcaaaaagaagttctgaaatcttcagactattagatgctgcatcaatgttctcgaaagaaaagtccatggcaatatgaattatggcgtgttgatatctgctaggttacatacactgaacacttatgattttgcttctactgctatctctctctaaaatttgctatgttttagcatgttaaaatgttgtaccttgtatacccttggttgttttatcatcgttctcaagaacctgtcaggtttattgcatgattgtttagatttggtcacttctctaaatctcaactgatttttatagcactaaaaaatatcgaagctatttggattgacaataaggttttaactggttttccttgcattaaaatttaaaaggcagagaggctatctatgacgaaagaagtggcaaatgtaatgttggacttctcagttaggacggcaacaactcatacccctgaattccttggtttgccacaaggagcatgggttcaagagggtggcccacaatgtgctggtcagggtgttgttgttggcctcatcgacacaggaatcgatccaactcatcccagcttcgcagacgacttgataactgacagttatcctgttcctgctcattactctggcatttgcgaggttacaaatgattttccatctggatcctgcaacagaaaacttgtgggagctaggcattttgcagcctctgcaataaccaggggagtgttcaatgcctctcaagatcatgcttcaccttctgatagtgatggtcatgggacgtaagtactatctgctgattcaccctttaaaattatttgaaggagcaagaatacgaagccattaccaatctactactggttttgttacattgtccaatcacgcttgcaaattttaagtaaaatagtagcattcttgagaattcatagtgctacagtagagttttcttatttttcttgtttgactatccagttctgcagcttctgcctaaattattcatagatatttcatttacatttttcactccatatgtcattgtggctctttttttgtcagcatatctgttttctgatatatattttttgtacatcgtacagccatacagcatccatagcagctggtaatcatggaattcctgttgttgtggctgggcatcattttgggaatgcaagtggaatggctcctcgtgcacagtaagtccattacctttttctgcggagacatataagatccactttattcccaaatgttaatgacaaattaatttccagcattgctgtctataaagctctgtacaaaagctttggagggtttgctgctgatgtagtagctgcaatagatcaggtaatggtttacctgcaagctaactatcttcttttgatttagcacaaattaataccacattttagaatgctacaatgcatatgggcacattgtgacattttattgatgacaagtcattcatcatattgcaggcagctgaagataatgttgatataatcagcttatccattaccccaaatagaaggcctcctggactagccaccttctttaatccaattgacatggctcttctttcagctgtaaaagctggcatatttgtcgtgcaagctgcaggaaatacaggtccttcccccaagagcatgtcatcatacagtccatggatttttactgtaggagcatctgcccatgacagggaatacaacaactatgttgtacttggcaacaatctgaccattacaggagttggccttgctcgtaagttcctagtagtattttccattgtgcgcaactgcacatggctggtgttgtttgattctaactttgtgttactccacaaatacagctggaacagatggtgattccatgttcactctagttgctgcacctcatgcactgaaaaacaatgtagccagtcctactgaaatgtccctaggggagtgccaagattcaagccaccttgatgaagatctgataaggggaaagatactggtctgcagctattccatacgatttgtacttggcctgtcgtctgtgaagcaagctttagatactgcaaagaatgtcagtgctgcaggagttatattctatctggatccatttgtcattggattccagctgaatccaactccaatggatatgcctggacttataataccatcatctgatgactctaaggtatgacagccaaagcaagagtcttgttattactcatcccttgctgatatgaagaaaattaacaaatgtgatgcaacattctcaggtatttctaaattattacaatgagtcccttgtgagagatgagacctcaaacaaaatcgtcagctttggtgcaattgcaaaaatactaggaggccaaaatccaaattatggtatttctgccccaaaagtaatgttttattctgccaggggtcctgatcctgaggacaactcactggccaatgctgatatcctgaagccaaatctgatagcacctggcagttccatttggggtgcttggagttctcttggattggactctgctgaatttgctggtaacttgacaatttacctactttctaatcttgtttagaacataagttttattctttgaatcatcaggcatataaaatagcaataaaacaaaacagtggcatgcattttctgtttttttaacagttctattaggtgctaaaatacctgttaatgagagagcttatgtctgaattgaagattcagcctaattttttccccttcaatagtaccatgaatcatttgtagattacggttggcattgatttgtgccaacagttgttctgcatttttgttagtccattccctttacctcgctgatagagtgatagagcaaaattttatgtagaagtaatcacagaaagcgctacatgatttcactctttaattgtgcattttaacacctaagtttaggtcatgctctagacataatgctttacagaaaaggttgtataaaaactgttctagttattgtggaagcccttaataagatgttcgtttagcattagaatccaacctataacatcttctattaataaatttgcttatataataatttttttcttacatagattaattgaataattatgttgtttttgacttactgtctaggtgaaagttttgcaataatttccggtacaagtatggctgcaccacacgttgctgggcttgctgctctagtcaagcagaagttcccttattttagccctgcagctataggttctgcattatcgactactacaagtctcagtgacagggaggggaatccaatcatggcacagagaacatacggcaatccaaattcaactcaatctccagctacaccttttgacatgggaaatggatttgtcaatgctactgctgctttggatcctgggctcatatttgattccagtaagttcaactgccatttcttctgtttattttactattatcagtacctctacctttggtagagttcactggggcctatgttatacaaactccgttccaaaatataagcattttttctatgcatttttcaaaatgtatctgatgcttctatctggaacggatggagtacctgatagtatgaatacaaactagcaagtagcaacagcaatatagcttgaatgtcatacatgcaatgcaacattttttctcactataaagtcagactgaaattctcagtgtagtttagtaattattcaatcctgacagcggcatgactttacaggttacgacgacttcttctcctttctatgtggcataaacggctctgctccagtagtgatgaattacaccggcaacagctgcagctcctccgccatgacaggggctgatctgaacctcccctccatcaccattgcagtgctcaaccagtcaagaacgataacaagaactgtaaccaacgtggcgagcgacgagcgctacacggtcagttacagcgccccttacggggtcgccgtctccgcgtcgccggcccagttcttcatccccagcgggcagaggcagcaggtgaccttcgtcgtcaacgccaccatgaacggcacctccgcgagcttcggcagcgtcggcttctacggcgacaagggccaccgggtgatgatcccgttctcagttatctccaaggttgtgcaccgttcatgatttgactgatggaagaacgctgtaatatggcaaaggatctgcctgatccggcgtatgcagcgggggtaactttgactgcctggggcttaacctgaccggagattttttgttgatcttgatgtacattttgatgcatgtcggtgtaagtaagatcaagatgagtgagtggctaatatctgtaactgtaaagagaatggtgtaccggactccgtcctttcacgaatgagaaatcatgctttttctc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0769200, RefSeq:Os01g0769200