Difference between revisions of "Os01g0784700"

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(Created page with "{{JaponicaGene| GeneName = Os01g0784700| Description = Curculin-like (mannose-binding) lectin domain containing protein| Version = NM_001050998.1 GI:115440366 GeneID:432703...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0784700|
 
GeneName = Os01g0784700|

Revision as of 19:00, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0784700

Description

Curculin-like (mannose-binding) lectin domain containing protein

Version

NM_001050998.1 GI:115440366 GeneID:4327038

Length

7839 bp

Definition

Oryza sativa Japonica Group Os01g0784700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:35004721..35012559

Sequence Coding Region

35004807..35005118,35005220..35005370,35005462..35005666,35005784..35005994,35006228..35006403
,35006531..35006662,35010994..35011555,35011672..35012430

Expression

GEO Profiles:Os01g0784700

Genome Context

<gbrowseImage1> name=NC_008394:35004721..35012559 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:35004721..35012559 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcctcctcctccccgctctgctgctacctgctgctcttcgtcgtcgtcgtggtgctcacgggcagctgccgtgccagggacacagtcgtgcccggccgcccgctcgccgcgaacgagacgctggtctcgggcggcgacgccaacttcgtgctcggcttcttcaccccgccgggcgccaacagcacctacgtcggcgtctggtacaacaaggtctcggtccgcaccgtcgtctgggtcgccaaccgcgaggacccgctccccggcgacgtcgcggacaaccccgacgccacgctctccgtgtcgcccacgggcacgctcgccattgtagcggggaactcgaccgttgtgtggtcggtcacgccggcggccaagctggcgagccccacggcccggatcatggacagcggaaacctggtgatcgcggacggcgctggcggtggcgtggcgtggcaggggttcgactacccgaccgacacgctgctcccggagatgaggctgggcgtcgactacgtgaaggggaggaacaggacgctgacggcgtggaagagcccctccgacccctcgccgggccccgtcgtgatggccatggacacgtccggcgacccccaggtgttcatctggaacggcgccgagaaggtctggcgctccggcccctgggacggcgtccagttcaccggcgtcccggacaccgtcacctactccggcttcaccttcagcttcatcaacaacgccaaggaagtcacgtacagcttccaggtgcacaacgtgtcgatcatatcgaggctggggctgaacagcacggggagctacgggctgctgcagcggtcgacgtgggtggaggcggcggggacgtggaacctgtactggtacgcgcccaaggaccagtgcgacgaggtgtccccgtgcggggccaacggcgtgtgcgacacaaacaacctgcccgtctgctcctgcctccgcggcttcacgcccaagtcgcccgaggcgtgggcgctgcgtgacggccgcgcggggtgcgtgcggtcgacgccgctcgactgccagaacggcaccgacgggttcgtcgccgtggagcacgccaaggtgcccgacacggagcggagcgtcgtggacctgggcctcagcctggagcagtgccggaaggcgtgcctcatgaactgctcctgcacggcgtacgcgagcgccaacgtgagcggtggcggccgcggccacggcgccggcaccggctgcgtcatgtggacgaccgggctcaccgacctgcgcgtgtacccggagttcggccaggacctcttcgtccgcctcgccgccgcagatctcggtttaacaagcaaatctaacaaggcacgtgtaataatcgccatcgttgtcagcatctcatcggtgacgtttctgtcagttctcgctggttttctcgtctggacaagaaagaagaagagagcaagaaaaaccggatcaagcaaatggagcggtggttcccgcagtactggtcgccgctatgaaggaagcagtcatcacgatgatgatctggaacttccaatctttgatctggggacaattgcagctgctactgatggtttctcaatcaacaacaagctcggtgagggtggcttcggaccagtatacaagggtaagctcgaggatggacaagaaatagcagttaaaacgttgtccaaaacatccgtacagggtctcgacgaattcaagaatgaggtaatgttgatagctaaacttcagcataggaatcttgttcggcttctcggcttcagcattagtggacaagaaaggatacttgtgtacgaatacatggcaaacaagagcctagactactttctgttcgcgcgataccgtataatagaaggcattactagaggtttactatatcttcaccaggattcaagatacagaatcatccacagagacctgaaggcaagtaatgttcttcttgacaaggagatgactcccaaaatttctgactttggcatggcaagaatgtttggaagtgaagagacagaaatcaataccagaaaagtggtcggcacatatggctatatgtctccagaatatgcaatggacggagtcttttctgtcaaatcagatgtatttagttttggagttttactactggaaataattagtggcaggaggaacagaggggtttattcatattcaaaccacctaaatcttctgggacatgcatggagcttatggaatgaaggaaaaagcttggagttagcagatgaaacaatgaatggctcgttcgactcagatgaagtactcaaatgcatcagagtgggactcctatgtgtgcaagagaacccagatgaccgtccattgatgtctcaggtgcttctgatgttagctacgacagatgctaccacattgccaactcctaaacagcctggctttgcagctagaagaattctaatggaaacagacacatcatcaagcaagccagactgcagcatattcgacagtgcaacagttactatacttgaaggtcgatag</cdnaseq>

Protein Sequence

<aaseq>MASSSPLCCYLLLFVVVVVLTGSCRARDTVVPGRPLAANETLVS GGDANFVLGFFTPPGANSTYVGVWYNKVSVRTVVWVANREDPLPGDVADNPDATLSVS PTGTLAIVAGNSTVVWSVTPAAKLASPTARIMDSGNLVIADGAGGGVAWQGFDYPTDT LLPEMRLGVDYVKGRNRTLTAWKSPSDPSPGPVVMAMDTSGDPQVFIWNGAEKVWRSG PWDGVQFTGVPDTVTYSGFTFSFINNAKEVTYSFQVHNVSIISRLGLNSTGSYGLLQR STWVEAAGTWNLYWYAPKDQCDEVSPCGANGVCDTNNLPVCSCLRGFTPKSPEAWALR DGRAGCVRSTPLDCQNGTDGFVAVEHAKVPDTERSVVDLGLSLEQCRKACLMNCSCTA YASANVSGGGRGHGAGTGCVMWTTGLTDLRVYPEFGQDLFVRLAAADLGLTSKSNKAR VIIAIVVSISSVTFLSVLAGFLVWTRKKKRARKTGSSKWSGGSRSTGRRYEGSSHHDD DLELPIFDLGTIAAATDGFSINNKLGEGGFGPVYKGKLEDGQEIAVKTLSKTSVQGLD EFKNEVMLIAKLQHRNLVRLLGFSISGQERILVYEYMANKSLDYFLFARYRIIEGITR GLLYLHQDSRYRIIHRDLKASNVLLDKEMTPKISDFGMARMFGSEETEINTRKVVGTY GYMSPEYAMDGVFSVKSDVFSFGVLLLEIISGRRNRGVYSYSNHLNLLGHAWSLWNEG KSLELADETMNGSFDSDEVLKCIRVGLLCVQENPDDRPLMSQVLLMLATTDATTLPTP KQPGFAARRILMETDTSSSKPDCSIFDSATVTILEGR</aaseq>

Gene Sequence

<dnaseqindica>7442..7753#7190..7340#6894..7098#6566..6776#6157..6332#5898..6029#1005..1566#130..888#cggcccaccccgtcttgcaactagctccggtccaaaaccgcacttgtgcacgacggctactcactctcgcagtggcgtgttagcatagcaccgctcgctcgttgctcgcgcgcgccgggaatcctagcaatggcctcctcctccccgctctgctgctacctgctgctcttcgtcgtcgtcgtggtgctcacgggcagctgccgtgccagggacacagtcgtgcccggccgcccgctcgccgcgaacgagacgctggtctcgggcggcgacgccaacttcgtgctcggcttcttcaccccgccgggcgccaacagcacctacgtcggcgtctggtacaacaaggtctcggtccgcaccgtcgtctgggtcgccaaccgcgaggacccgctccccggcgacgtcgcggacaaccccgacgccacgctctccgtgtcgcccacgggcacgctcgccattgtagcggggaactcgaccgttgtgtggtcggtcacgccggcggccaagctggcgagccccacggcccggatcatggacagcggaaacctggtgatcgcggacggcgctggcggtggcgtggcgtggcaggggttcgactacccgaccgacacgctgctcccggagatgaggctgggcgtcgactacgtgaaggggaggaacaggacgctgacggcgtggaagagcccctccgacccctcgccgggccccgtcgtgatggccatggacacgtccggcgacccccaggtgttcatctggaacggcgccgagaaggtctggcgctccggcccctgggacggcgtccagttcaccggcgtcccggacaccgtcacctactccggcttcaccttcagcttcatcaacaacgccaaggaagtcacgtacagcttccaggtataaactgacgagtacccgtgcaatttatgtgtacaactttttaaattttattggagttgtaccgtaccgctggtgccatgtcatatatgacacgcgtgcgcgtgttcgtgtaggtgcacaacgtgtcgatcatatcgaggctggggctgaacagcacggggagctacgggctgctgcagcggtcgacgtgggtggaggcggcggggacgtggaacctgtactggtacgcgcccaaggaccagtgcgacgaggtgtccccgtgcggggccaacggcgtgtgcgacacaaacaacctgcccgtctgctcctgcctccgcggcttcacgcccaagtcgcccgaggcgtgggcgctgcgtgacggccgcgcggggtgcgtgcggtcgacgccgctcgactgccagaacggcaccgacgggttcgtcgccgtggagcacgccaaggtgcccgacacggagcggagcgtcgtggacctgggcctcagcctggagcagtgccggaaggcgtgcctcatgaactgctcctgcacggcgtacgcgagcgccaacgtgagcggtggcggccgcggccacggcgccggcaccggctgcgtcatgtggacgaccgggctcaccgacctgcgcgtgtacccggagttcggccaggacctcttcgtccgcctcgccgccgcagatctcggtacgccatcacattccacgcgaactatgtactatgcattgctacatacgtacgtatatatctacgtattacgtgcatgttttacgtattccatgcatgctgcgctgcatatagaatcttttccatgtgtttggtgttcgttccgtccaaatcagacagcacaaaagtaccgtcgaaggccagatatttgggcctcctagtccattcctttttggctatctccctctaatcctccatagctccaatccctccttttttggggagaatctcaatagaagattagaaagagatgatgagtgccacgcagcgtgccctgcttcaaccgagagaacttgctgccctgatccatttcactggaagacgatcacgacattgattttgattccggccatctttattccttgccctttaatctccttttctctccatcatgaaaccgatcgatgttagcaagggagaaaggaagcgaaaggagctttgattaattagccagacagcgatcgataccatttggtcccgggctctttcgaaggcggggcgcttatcgtcgcaaaagaagcacgctttgattttaggagctatcgcgcgcaacaaaagctcaattatacacggtagaggaatgagacggcttccacgtcgatctctccaacgtgcatcatatcactgcacctgctagctcccgtgcagcattctcgagtcgatccattgctgcccggccatttgtgaggcccctactgatcgcctcgacgtgtatcatcgaccaaaggagccttttacatggtgtggggcttgcccgatttggcagctagtacaaagattagagggccctgtacaccacaagagcgaagtgtggccgtcgtcttgattggtaggtgaaatttcgccgggaagaagataaagtagcagatcttggatagctctagtcaacagcgacaagacaaatagacaatgatcctcattatttgaggagataggcagaggcagggattgcagtagatctgtagatgtacgtacaaatctttagcttataaattggaaacgaatttgatggtctgaagtttgaactcacggtgcaacttggaacttaatttggatcttacgcttgttgtgttcaataatagtattttaagacgatggtaagttcacatgacaaaaaaaaaactaagaagtactctcttcgtcgtataatataataacctagtatcagatgcgatatattctaatgtcccatttagttttgaacacatcctatattcagttctatattattatagtgtaggaaagagggagtagaagtactccctccgtcccattatatctgcagttgagaattcctgcgtctgacgtttgaccgtccatcttatttaaaaaattttatgattaatatttttatttttattagatgataaaaataaataatactttatgcatgacttattttttaaaattttttcatattttttttcaaataagacagatggtcaaatgttgtatatgaaaaatccatgattgcatttaaaagagacggagggattagtatactagtggaaaggagggagtagaagttcctagtacaacaaatttaaactgtttgtctagatttgttatactaggatgtctcatatcccacaccaaaatcccttatatacagggacagagggagtagaaagttgtagccttgttgggaattggatttggaaccgggtagatcgatgtgaagaatctgcccttgccgagagctagaaaacatcccatctgccacaaagctctacgtggtaatcaaacaacctaatgtctccttcggttttagattgttgtagtccctccgtcccataatataagagattttagatagatgtgatatatcctagtataatgaatctgggcagattcattgtattaggatatgtcacacctacctaaaatcctttatattatgggaccaacctagtagtggatgtgacacattttaatactatgaatttggatatacacatattcatattcgtggtaataggatgtcatatactccctccatcccaaaataagtgcaaccatgagtttccgtgttcaactttgatcgtccgtcttatttgaaatttttttatgatttgatttttattgttgttatattataaaaattagcatggtgtcccttgcagattgtgcggctaggatcattatattttctctcatatattcttatttttttttaattcagaatttccattaattctaaattgtatatcgatatggactctagtctcatattccaatattcattattttttaattctgaatttcagctatttctaaattgtatttctatatggattctatttttctttttcttcaattaatatgagaatttctagaccacgagaacgaacgtggaggctttctttttctattactttaataagttaatagattataaaacatgaatagactctacgcttgacttatgttttttagttttttggaaaaaatttcaaataagacggacgattaaagttgggcatggaaactcatggctacgcttattttgggacggatggagtactatcatagatttgtttttttatgagacggtgggagtaggaaagatggagcagaagtaatagcactggctttgtttagttcccattttttttttctaaaaacgtctcatcgaatctttgatacatgcatggagcattaaatattggataaagaaaaaaacaaattgcacagtttgcatagaaatcggaagacaaaccttttgagcctaattagtccatgattagccataagtgctatagtaacccacatgtgctaatgacggattaattaggcttaataaattcgtctcgcggtttccaggcgatttttgaaattaattttttcatttgtgtctgaaaacccattccgacatccgatgaaatgtctgatgtgacacccaaatttattttttcgcgatctaaacaaggccttagattgtactccctccgtcacataaaaaacgaatctagaaccaaatgtgacatattgtagcactacgaatctagacacagtactatgatgttttaaattctatactaagttggttttttatgggacggagggagtagcttcgttgggaattggatttggaaccggacagatcgatgccaagaatcttccctcgccgagtcaagccagaaaacatcccagctgccacaagcttcacgtcgcaatcaaacaaccatcggtcacttcgctttatcgcccagccgggagagatattttccgtgcaaaaaccacgctccaaagcgaccggccgccaccgcgccacccgcgacatggcagcggccagcgggggtggccggccaatcggccatacgcctcgctttccagcacacactgcacgcgcggccgcgggcggcgtaccggccgaaccatcgagacagtgcatggacaaatatgtgaacgtgtgatgcgtcgccggacgccgggctctgcggcgttgctgggctaaccgaaaacacaaagcgtgaaggcctctgtgcctctagagaattcaaaaccacaaatgttcaaacgctagacaccgataaatccttacgaagaggttgggtacttgggtaaacatgttgaactggttcatggttgatcacatattcacgtgcatttgccactgtagatcgcctgtgatgctgtagcgcaaggtttccaggtgtacctgaaacagagcatctgactctggtttggcattgtttcgagggcatcatatgtggcactacatgttgttcagcgcgctactctgctctacgaataggcccctattcttctcggctttttcatcagattatttgcttcacaaaaaatatattttattaaaaaaacctttccaatagcattacttaggtggtgtttgaatctccttaagaaaaagattaagtgtttcacgtaaaacgagatgataataacatatgattaattaagttttaattattacaaacttaaaaaatagattaatctgatatattataacagctttcatatagaaaatttttacacgaaacgcacattttagcagtttgaaaagcgtatcactagtatccaaaagtttattcaacttttgttggagaaaagaacatggccacttcttttaagatatttattttttttaaaaaaatattcctacagtaaatagatattctgtagcaataatcgttccatattccaaaccaaacaggtaatactgattaaatgctcatatatggggcaactcattatattcctctagataaattagtcgatatgtcgttgcataccatcatcgatttaacagctacgtttttcttgcacaggtttaacaagcaaatctaacaaggcacgtgtaataatcgccatcgttgtcagcatctcatcggtgacgtttctgtcagttctcgctggttttctcgtctggacaagaaagaagaagagagcaagaaaaaccggtaatggccatgtgtcttccgagtgttaacaagcagatactccatataaatacttgaacaaaaagaggggaaaataataagcatatttcagggtatcatactcataccgacttctatgtgattataggatcaagcaaatggagcggtggttcccgcagtactggtcgccgctatgaaggaagcagtcatcacgatgatgatctggaacttccaatctttgatctggggacaattgcagctgctactgatggtttctcaatcaacaacaagctcggtgagggtggcttcggaccagtatacaaggtacaacactacatgaaccaccccaatgaatcacgcataaacatgcaaacattttgaacgcaagttcaatggcaactcatgattttcgttcaaaaaaatggcaactcatgatttcaagcatcaaaaggcaattatttaaggtcttcagcatataaatgaacgaacaatgatagcataaaaaaaatgatcttctgaaatttgaactacagccgctatgtctggttgatcaacagggtaagctcgaggatggacaagaaatagcagttaaaacgttgtccaaaacatccgtacagggtctcgacgaattcaagaatgaggtaatgttgatagctaaacttcagcataggaatcttgttcggcttctcggcttcagcattagtggacaagaaaggatacttgtgtacgaatacatggcaaacaagagcctagactactttctgttcggtatgactatctcagtctttttatgaccatgaaaaaaatggctgataatactgtgaagaacataacagtttgcaaatgtaacagaaaaatccaacagtgtcctgcttgactggcaagcgcgataccgtataatagaaggcattactagaggtttactatatcttcaccaggattcaagatacagaatcatccacagagacctgaaggcaagtaatgttcttcttgacaaggagatgactcccaaaatttctgactttggcatggcaagaatgtttggaagtgaagagacagaaatcaataccagaaaagtggtcggcacatagtaagtatgctaagtatttacaacaggaaatactgatcgtataaatgaatttactcatatatttgctttattcattttggctcttttgtagtggctatatgtctccagaatatgcaatggacggagtcttttctgtcaaatcagatgtatttagttttggagttttactactggaaataattagtggcaggaggaacagaggggtttattcatattcaaaccacctaaatcttctgggacatgtgagagcttaaatcatctactacatgtttgaatggaagttgttttctcaattcaatttcagagtaacttcaaaaactttttttctttttttgccccttaggcatggagcttatggaatgaaggaaaaagcttggagttagcagatgaaacaatgaatggctcgttcgactcagatgaagtactcaaatgcatcagagtgggactcctatgtgtgcaagagaacccagatgaccgtccattgatgtctcaggtgcttctgatgttagctacgacagatgctaccacattgccaactcctaaacagcctggctttgcagctagaagaattctaatggaaacagacacatcatcaagcaagccagactgcagcatattcgacagtgcaacagttactatacttgaaggtcgataggatgttaatgtgctaattgaacttactaggggaatgtgcattacataatgtgctttcttcatcaccgtgtgtttgagcaacagaaa</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0784700, RefSeq:Os01g0784700