Difference between revisions of "Os01g0801000"
(Created page with "{{JaponicaGene|
GeneName = Os01g0801000|
Description = Similar to Apurinic endonuclease-redox protein (DNA-(apurinic or apyrimidinic site) lyase) (EC 4.2.99.18)|
Version = ...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os01g0801000| | GeneName = Os01g0801000| | ||
Revision as of 19:00, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os01g0801000 |
|---|---|
| Description |
Similar to Apurinic endonuclease-redox protein (DNA-(apurinic or apyrimidinic site) lyase) (EC 4.2.99.18) |
| Version |
NM_001051072.1 GI:115440514 GeneID:4327960 |
| Length |
5093 bp |
| Definition |
Oryza sativa Japonica Group Os01g0801000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:35675343..35680435 |
| Sequence Coding Region |
35675361..35675404,35675833..35675989,35676080..35676177,35676268..35676332,35677048..35677269 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:35675343..35680435 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:35675343..35680435 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgccgctgctcctgcgcggcggctccctcttccgtctctacgggtgtggctgtgggcttccaagcgcaaatttcagtcccagcaaactagcactgataagactaagcttgatgatggcagaaacacgagccacctattcgcgtcgagctgcctctaagaatactgatatcaagaaagatgatgaacatgtccttgaaaaggaggatgttgctgaaagcaaattggagatagagcaacttaggaatgaccccgatcgactccaatccatgacagtgaaggagctcagggaaatcacgaggatgatgggaattcctgtaaaaggcaacaagaaagatttggtatcagccctgatggattctctgggtaaagtgggaacttcatcagttgagaagattggtgtgtctgaagtaccttcaaaaagaaaaggtgcttcagtagtagttgaacaaaacatagatagttctgaggtcatttctgaaactcctagtaagagaagtagagcaaagaacaaaggaaccgctgaggagagttctggggctaatgtcaagcaaagcaagacatcagtccagaagaaaaagctagttgtccaaggtgccagtgtggaccatgaagaaccttggactgtacttgtacacaagaaaccacaacctgcctggattccttataatcctaaggtcatgaggtctccatctcttagcaaggatacgaaggctctaaagattctgtcatggaatgtgaatggattaaaagctttacttaaatcgaggggcttctctattcatcagttagctcagagggaggacttcgatatactatgcctacaagagacaaaaatgcaggagaaggatgtagaagtcattaaggaaggtctacttgaaggctatacccatagtttctggacatgcagtgtatcaaagcttggctattcggggactgcaataatttcaagggtgaaaccactctctatcaagtacgggcttggtgtgccagaccatgatactgaagggagggtcgtcacagtggagttcaatgatttttacctcctgactgcttatgtaccaaattctggtgatggtctaaaaagattgacttacagggtcacagaatgggatccaagccttggtaactacatgaaagacttggaaaaatcgaagcctgttatactaactggtgatcttaactgtgcccatcaagagattgatatacatgatcctgctggaaatcgtagaagtgcaggctttacaattgaagaaagggaatcattcgagactaattttttgtccaaaggttttgttgatacatttcgaaaacagcatcccaatgttgttggatatagttactggggttataggcataatgcccggaagaccaacaaaggttggcgtctggattattttcttgtgtctgaatccattgcagaaagagtccatgattcatacattattccagacatatctgccagtgatcacagcccgctaggcctcgtactgaagctctag</cdnaseq> |
| Protein Sequence |
<aaseq>MPLLLRGGSLFRLYGCGCGLPSANFSPSKLALIRLSLMMAETRA TYSRRAASKNTDIKKDDEHVLEKEDVAESKLEIEQLRNDPDRLQSMTVKELREITRMM GIPVKGNKKDLVSALMDSLGKVGTSSVEKIGVSEVPSKRKGASVVVEQNIDSSEVISE TPSKRSRAKNKGTAEESSGANVKQSKTSVQKKKLVVQGASVDHEEPWTVLVHKKPQPA WIPYNPKVMRSPSLSKDTKALKILSWNVNGLKALLKSRGFSIHQLAQREDFDILCLQE TKMQEKDVEVIKEGLLEGYTHSFWTCSVSKLGYSGTAIISRVKPLSIKYGLGVPDHDT EGRVVTVEFNDFYLLTAYVPNSGDGLKRLTYRVTEWDPSLGNYMKDLEKSKPVILTGD LNCAHQEIDIHDPAGNRRSAGFTIEERESFETNFLSKGFVDTFRKQHPNVVGYSYWGY RHNARKTNKGWRLDYFLVSESIAERVHDSYIIPDISASDHSPLGLVLKL</aaseq> |
| Gene Sequence |
<dnaseqindica>19..62#491..647#738..835#926..990#1706..1927#2024..2273#2429..2543#2698..2835#2920..2967#3574..3654#3951..4110#4657..4778#gccctagctcgcccgcccatgccgctgctcctgcgcggcggctccctcttccgtctctacgggtacggttcccgtcccccctcccttctcctgctctccccgctcttacgcgcatttgttcttcccgtgccggttcgatgcgcagcagttctggatacgggtgtcgtgctcctagggtttacctttggtgacgaatcgaaatccgagttcccaaatttcttctagacggtgtcgcataaatgtgctacgtactaggcctgagttcattgcatttgtggggatgcatcatttttttaaaaaaaaaaagaatccccttaggaatcgctcacagttaactcttgtttgctcatattagcagtacggataggtcagggcgctgtcaaacgctgtggcgtttctgccactttgcattgaggaaattctgtgcttttgttctgcatttggagtccttggcacaagaatcacttgaaacttgtttctgtgactgtaggtgtggctgtgggcttccaagcgcaaatttcagtcccagcaaactagcactgataagactaagcttgatgatggcagaaacacgagccacctattcgcgtcgagctgcctctaagaatactgatatcaagaaagatgatgaacatgtccttgaaaaggttagcctttttatgccctttgtactaaacaggtggcattatccactgtaacttgtttatggttggatcacttatttgctttgactataggaggatgttgctgaaagcaaattggagatagagcaacttaggaatgaccccgatcgactccaatccatgacagtgaaggagctcagggaaatcacgaggtttagatttaccacatacccacatccttcgtttattttcagtcgatgataattgattgcctctctaatttagttcttgtgaatttaaaggatgatgggaattcctgtaaaaggcaacaagaaagatttggtatcagccctgatggattctctgggtaaggaaagaaatggtgtaaattacttagggtgcgtttggatccaaggctagatcaagcctagcctagccaggcaagaccaggtgtttggaatcgtgaaaaaatcctaacttttgagggcgagctagcctgcaggggcgagaaaaaactggctcacgagggagagccaaatcggctcgcctccgacggcaaacttctcacgtgcgactttcttcaacaaccaggcttcattcttgccgaactatagggctagcagatcgtgtatctatttcgctgccatcttcttgttaaatcactccatctttccagtcatggatgaatgcatacgatacgagctgctagctagcctgctaccattccaagccacagatagcaaatgaaccaaacggacgggtacggcaaacccagcaagcaggcaatgagttggtttgcctttgcctagcaaggctagctaggcaagggaaccaaacgctcccttacacatttgtagtaattcttgctcttcagaactaaaacaacaagccaatacctgtccttccacaaactaattgttccaatcatgcgccccccggcagcactaacataagtcatttttattcctacaaattctaatataggtacccaaagagatagccatctcattgctgtagctctctactactatataatgtttcaagggtgccatttttactggatgctggaatcctttctgcaggtaaagtgggaacttcatcagttgagaagattggtgtgtctgaagtaccttcaaaaagaaaaggtgcttcagtagtagttgaacaaaacatagatagttctgaggtcatttctgaaactcctagtaagagaagtagagcaaagaacaaaggaaccgctgaggagagttctggggctaatgtcaagcaaagcaagacatcagtccagaagaaaaagctagttggtatgtccattcattcttccattaatattttcttaattagtttttcattttaaaaattacctctctcttggctgattatgtgataatccattctagtccaaggtgccagtgtggaccatgaagaaccttggactgtacttgtacacaagaaaccacaacctgcctggattccttataatcctaaggtcatgaggtctccatctcttagcaaggatacgaaggctctaaagattctgtcatggaatgtgaatggattaaaagctttacttaaatcgaggggcttctctattcatcagttagctcagagggaggacttcgatatactatgcctacaagagacaaaaatgcaggcaagatatgattttagtttttcttatgcaaaattaccatctaaaattggacaaaaggttctttcttggggaaatggtatcttttcttctctctgaattgttttcatccttcactgctatagtttattaaccaggaattacgttattttgagcaggagaaggatgtagaagtcattaaggaaggtctacttgaaggctatacccatagtttctggacatgcagtgtatcaaagcttggctattcggggactgcaataatttcaagggtgtgcactgctattctcacatcctaccacaatgatcattgcaaaatggctacaacctctaatgcatcatatctcatgtttgttggtttgcttcgttttgtgccttatatcttgtttttatctataatgtgttgtgttctgcaaattcctttaggtgaaaccactctctatcaagtacgggcttggtgtgccagaccatgatactgaagggagggtcgtcacagtggagttcaatgatttttacctcctgactgcttatgtaccaaattctggtgatggtctaaaaagattggtaattctgcttattttaatcttgttatcattgagagttgataattcagataagttaaatccataaccatatattaccgtgcagacttacagggtcacagaatgggatccaagccttggtaactacatgaaagtatgcatatcctttttctctgattattattttaaattagtcctgttacccatattctgtcaacgcttttactaaagaagaaacagagcgctgtattttacctttattcttttttgttactgcattgttttctccatatcgtcttttgtagtggatatgtgtttagttgtagttgtatatggggttgacttgttctcgtgatacacatctgcacataccaaatcatactagaatttaaaaataaaggtaagatctggttagagcttgggatggtaggccaaaagtattagagttgtgaagtttgtcactgtttaatccaacacatttgtgaatcttccattatgcatccaattcccttattgaccattcagcactttctattactcacactaatcaacatatttcaacatttttcttacttttgtggatgcatgcgggctaggatgtttttgtgggactgtaataatgaccttgcatatcagaaatgcacaacattcacatgtcatctctcctgcatttaccttgtttcagtatatcagtagcaataaatgtgctttcaagtgccaaatggcatgcttctctgacaaatttcttattattatgcaggacttggaaaaatcgaagcctgttatactaactggtgatcttaactgtgcccatcaagagattgatatacatgatcctgctgtaagtaattattagtttcgaccacccacatatttcaaccaatactgttccatgcaaaagcatagcattcttatggttgactgtttagtatatgtgatatggcacatgtgtagattacaatgtcattcaacatttctcattttgctgttaaaatttttatttttctggatcaacatcagaggtaaaagtagctatactaacatccgagaacataaatgtctagttttggggtatccagttgcttccccaaacgttccttttatacttgttagcttatagttaatgctcttatccagggaaatcgtagaagtgcaggctttacaattgaagaaagggaatcattcgagactaattttttgtccaaaggttttgttgatacatttcgaaaacagcatcccaatgttgttggatatagttactggggttataggcataatgcccggaagaccaacaaaggtatgtacttactcaatgtcaagagctttatcataccataaaaaataactgaaatatttttcatatgattatttatttacctaatatttttttcctgggctggcgaaggagccagccgaacttcaataataatttcctaataacaccataaagatcacaagagttggtaaataacacctgtgttgatgtctcattggcatgtgggccatgaccccaaattttatccttggatgttatttccaatttatacatgtttgcagtgtaattgaacatactatccctggcatattaggctgcctagtcctctggcttcctaaatggagttcatcatcgttgtgtcgtcagctggcccatcgagcacccttctttcatttcagacggaactcagaacttcttttaatccttattgatagcatttcccttaggaagaaccacccgcattatagcatatgtctgcacactggattatgcacactagtttgtttccttgtaacataagagcatgctaattatttgaccgtgtcgcattttgtcattgtttggcaggttggcgtctggattattttcttgtgtctgaatccattgcagaaagagtccatgattcatacattattccagacatatctgccagtgatcacagcccgctaggcctcgtactgaagctctaggcaggctgcatgcctggaacccaatacggacttctgggtttagttaacaatgttttcctgctgtgagtctgtgggagggtatgtggttttgtatcagtaggttctaatactagcctaacggatgtggatgtgttacaccaatccgatgttggaaaaaaggctggtttcgatatgtagccgaatgagtctgggtgatgtagtgttgttacacttccttaagctgcattgacagatcgtaatgcggggtctgcacttttcacgttttcagtggagtagctcagtattggaattcgatggtaatatcatgattcgtag</dnaseqindica> 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