Difference between revisions of "Os01g0818600"

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(Created page with "{{JaponicaGene| GeneName = Os01g0818600| Description = Leucine rich repeat, N-terminal domain containing protein| Version = NM_001185697.1 GI:297720528 GeneID:9267172| Len...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0818600|
 
GeneName = Os01g0818600|

Revision as of 19:01, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0818600

Description

Leucine rich repeat, N-terminal domain containing protein

Version

NM_001185697.1 GI:297720528 GeneID:9267172

Length

7577 bp

Definition

Oryza sativa Japonica Group Os01g0818600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:36628908..36636484

Sequence Coding Region

36628908..36628995,36629171..36629242,36629324..36629392,36629594..36629662,36630074..36630148
,36631929..36632000,36632087..36632158,36632252..36632395,36633324..36633395
,36633669..36633740,36634271..36634418,36635197..36635298,36636095..36636332

Expression

GEO Profiles:Os01g0818600

Genome Context

<gbrowseImage1> name=NC_008394:36628908..36636484 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:36628908..36636484 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgacagctgcacgggctgaaaagttgcagcagcagtagtagtatatgtccccccgcgccgcgggggttgtcgctgtgggtgaaggtgcggtgctcgctctcgcctgcctttcccgagttcgttggtgagggcaatctccggccgggcgcctcgtcggctggtgctccccgatcggggggctgctgcaaatcgctgttcggattggagcggccggtcggtctgcgtttgattgcagacatggcgaacttcagaggttttcggcgcgcagtgatcgtggttgttctgtgcatttgtcatgtgaatgtcgtaaggggacagagcactgaccctgctgaagtaaatgctctcagagctatcaaaggaagattaattgatccgatgaataatcttaagaattggaatagtggagatccatgcacatcaagttggaaaggagtcttctgtgacaatataccaataaataattatcttcatgtaacagaattgcagttatttaagatgaatctttctgggactttggcaccagagatcggtcttctatctcaattgaaaacattggatttcatgtggaacaacttgactggtaacataccgaaagagatagggaatatccacacactcaggcttataactttgaacggtaatcagctatctggttctttaccagatgagattggctatctccaaaacttgaacagattacagatagaccaaaatgaaatatcaggacccatacctaaatcatttgctaatttaacaagcatgagacatcttcacatgaacaataactcattaagtgggcaaatcccatctgaattgtcaagattgcctgaactcctccatctccttgtggacagtaacaatttgtctggacctcttcctccagaactagcagagactcgcagtttacaaatacttcaggctgataacaataacttcagcggaagttccatccctgctgcatacgaaaacataccaacacttctaaagctgagtcttaggaattgcaatttgcaaggaggtattccagatataagtggcattcctcaatttggctatttggatcttagctggaaccaactgacaggatctataccaactaataaacttgcttcaaacgtcactacaattgacttgtcacataactctcttaatggaactattccatcaagcttttcggggctgcctaatcttcaattcctatcgattgaaggaaatcacatagatggtgctgttccatcgacaatttggagtaacatcacttttgtgggaaatcgaagccttgttgtg</cdnaseq>

Protein Sequence

<aaseq>MRQLHGLKSCSSSSSICPPAPRGLSLWVKVRCSLSPAFPEFVGE GNLRPGASSAGAPRSGGCCKSLFGLERPVGLRLIADMANFRGFRRAVIVVVLCICHVN VVRGQSTDPAEVNALRAIKGRLIDPMNNLKNWNSGDPCTSSWKGVFCDNIPINNYLHV TELQLFKMNLSGTLAPEIGLLSQLKTLDFMWNNLTGNIPKEIGNIHTLRLITLNGNQL SGSLPDEIGYLQNLNRLQIDQNEISGPIPKSFANLTSMRHLHMNNNSLSGQIPSELSR LPELLHLLVDSNNLSGPLPPELAETRSLQILQADNNNFSGSSIPAAYENIPTLLKLSL RNCNLQGGIPDISGIPQFGYLDLSWNQLTGSIPTNKLASNVTTIDLSHNSLNGTIPSS FSGLPNLQFLSIEGNHIDGAVPSTIWSNITFVGNRSLVV</aaseq>

Gene Sequence

<dnaseqindica>7490..7577#7243..7314#7093..7161#6823..6891#6337..6411#4485..4556#4327..4398#4090..4233#3090..3161#2745..2816#2067..2214#1187..1288#153..390#attaataactccccgaattcgccaaagcacaaccttcccccaccaacccaccgcacccagagcttcgcctcgacctcgccttcgccttcgtcgctgtagctgccgcgatccaggaggaaagggagtggggtgcggatgggattgggggaggaatgcgacagctgcacgggctgaaaagttgcagcagcagtagtagtatatgtccccccgcgccgcgggggttgtcgctgtgggtgaaggtgcggtgctcgctctcgcctgcctttcccgagttcgttggtgagggcaatctccggccgggcgcctcgtcggctggtgctccccgatcggggggctgctgcaaatcgctgttcggattggagcggccggtcggtctgcgtttgattgcaggttcgcttcttcgattcctcgaggattgtgcggttggtttgttcaggatttgtttctagtgtgagttcgatcttgttgttttcttttcttggattgaaatttcacttcagattacagttttctcgctatttgccaaaaaaaaaagaaggcttggatttttttttttatccctattcgttgttctcctagcttcttggtcttcttcggctcctcgcttctcttctttgtatctgtacctttgaagctataaaagtttggtacttttggtgaaaatattcgacggagaaggtatgcggaaaagggcatatttgtcgccataaaaatttacctaacgttgacaaccattagtagctcgaagtcctgaaccttgtgtactgtgctcttgtgccgtacagtctgcaggcttagttgggaagtcccagttgctggttgtgatgtggctcttgctgtcagtgttaataggttgttttcaccttatgtggaggagcttaagtaacttgcaagctcgcttacttttctttagtcaagaggagagttgattttgattgtgcccgggccatattttttccatggttgttggtttgaacacaccatggttaggtcaggcgcgttaagcatcatatggagttgacacgctttcacaccttagatactggatgctagtcttctgtgggtaggataagcgcctccattttggactaatcgatcatttagaatggtagcaagcgtgctggatgtctggatcgtgcagggatgactaagttgctgatcacttgctcctgattctcttgtacagacatggcgaacttcagaggttttcggcgcgcagtgatcgtggttgttctgtgcatttgtcatgtgaatgtcgtaaggggacagagcactgaccctgctgaaggtaatatacagtaatctctagtaggacatgtgctgtactgcatttgcttgcttgctttctgttatacttttgagccaggcagtttgaattgccggagctcagaatagctactagttctatagttcaggaagacagaattgggctttaagctttcaaagtttcaattatgcatatcccatctgtgcggatttaagcatatctttttgtaagtagtgctatgttttgaaagtatctcgaagatcccgtcccccccatctgaacctgttgtgaattgtccgtttctacaatgttcatgccatcaattgccgcacactcaattgttgtcacaccagtaatcagttatattcatgtggtaatttaaaaagttcatgatataacatgtttttaattcagagttaaagaagttcataatattacagattttaaattaaagaagttcacaatattgtaagtaaacttacaatattacataacattatattgcctggcaattacataacattatgttagttaatctggtatgaacaactttgttagagaagtagaataataactatttgaaagggttgcttcccagtagttcttccaaagaaatatctgaagaatagttttttaatagataatctgaagatagctgtgcaatcaaagtaagaataatcattattagtttttttgttgttgctgagatgtgtgatgcttagtttaaacagtaatattgactcagatacttaaaattttaaaactgctgtgaattgaactgtttccctcttatgtgcagtaaatgctctcagagctatcaaaggaagattaattgatccgatgaataatcttaagaattggaatagtggagatccatgcacatcaagttggaaaggagtcttctgtgacaatataccaataaataattatcttcatgtaacagaattgtatgataatctttcaaccttattattttatacgcttactcttctccctctttttttagtggtaacggtggtttgttctttcccaagtacttgttgagtgagccctctgcaattgttgtttgtataattgtcttagctccagccagaggttctggctttctctctttttctttaagcaggttcatcacctgtactatgagttttctacctcttaatgcaaaatgcgcagccctcgtgcgtctttctgaaaaaaaaaagaatacctcagccttgactgggtaaaataattcaagttcccattgtgttcgctatcatcaatgacacatacctctagttacttttagcctaagttgctattttcatgttttggtcaaagccgtgatcattctctaatgaaatccattttgcattctgatatctgtttattatctacttctgtccattctgtatgatgtgcaatatgataattggattgccaatatcatgctattttttttctcttgaaattgcatacttttttctggatgcaggcagttatttaagatgaatctttctgggactttggcaccagagatcggtcttctatctcaattgaaaacattgtaagtaccaacttgatagaaagctggaatagttaactgaatttaaagataatattgtatctcatggggtactacatttagtatattttaagcaaaaaaacataattctgactcacaagaaagaagaaacttacataatataataactgggacataaaggaattgtttcttgcatggttgactcttattgtgcatttagtctcgtgaagccttttcttttgttacatttccaaaattttggtacctaactgctatattttgttcttttgaaagggatttcatgtggaacaacttgactggtaacataccgaaagagatagggaatatccacacactcaggcttatgtaagtttcatctgtgcaatccaatttttgtgctctcttttcagtgtgcacattatccacaggccgcagcatcttacagtttatcttgcaaaaccacataagcttaggaatctaaaggtttcttcattgtcagcaagtattttatatacatatggacaaagtccggattgcccttcttaacccaaaggtactgtgatggggctaatagtactaagctttggacatataggatccttacaataatatactagctatagcttaaagatatttcattttggtaggttcgttttggttctaaatagttgttttgggttttcagtggaacattttctattaaatatcccaatcagttgctaattgacagtactatcagagagatgtgcagacagttaatagtggttgcatatttccacgggtaaaacattaggataaatttttcgccgggctggcgtaagagagccagccgaaatttatgaagaggaaagggagaaaatgttacaagctacagcagagttacatgccagcaaagccggcaacacacttttacaaggataaattgatcccctttttgtgtaaaatgatatctcaatgagaccacagagagtttattccaaccgcttaatttcagtaaaatttgtaaaggaaaagtatgcactgtaaagtattctatataaattgccatgaattaatagctgaatattgacatatcttagtttaatgcagtatatcttagaacttttatacaccatgcgacactattttattttgaggattacttttattacctgtttcccaagcattaaacatgcagtaaatgttgtagttctctttgcagaaattctgtaaatttctttatatgaattgcatccaggataataggtgctcgtatataacaaaatgttgactgttgtcgcaataacttttgcagaactttgaacggtaatcagctatctggttctttaccagatgagattggctatctccaaaacttgaacagattacagatagaccaaaatgaaatatcaggacccatacctaaatcatttgctaatttaacaagcatgagacatctgtaagtataaatatttaaattttgatctttcctccccatgttgcccccatattttaaacttaattataatcttgactcttcttctaccatcagtcacatgaacaataactcattaagtgggcaaatcccatctgaattgtcaagattgcctgaactcctccatctgtaagtgggacttcacttgtgtttttttttaccttttttagcatgagctgtgtaattaattttatcttataccacaaacttgacagccttgtggacagtaacaatttgtctggacctcttcctccagaactagcagagactcgcagtttacaaatactgtaagtgtatttttctttctacccgaatgttgcttttaaaaatttacctacagcgcatcagaatgtgtctcctgttttctttggactgatatctatcacttcatttaattaagagtatcatgggtttatagttgcttgaagctgactgatgataacttcaatttcaaatttagaaatattaaatggtaccaattgggtcttgagcgctatacctatatatctcttggtcgctattgacgcccctaagtgggtaatcaagggcatcgacaaaattcgtcgcggcttcttatgggctggcaaagtgcaggccaagggaggttgttgtcgggtcgcatgggcaaaagtttgctcgccaaaggagtatggtgggctgggggtaccaaatcttgagctcatgggcatcgcccttcgatcccgttggacatggctgcaacgagtttcctccggaaaaccttggcaaggtttaaccatcccgggctcgcagaaggagaagaattttgtggccgcttcaacgatatgcctcgttggcaatggcacttccattctattctaggaggattgctggttaaaggaaggggcggtccgctccattgcgccatccctcttcaaccagattccagtgcgcattcggaagagaagaacggttgccgaggcattgctcaaccgaacctggatatcagatatccgaggtggcctcggcattcaagccatccttgaatatctgaatctctggtcgataatccaagcggttgatcgaacggccacagaaccggacacactgctttggagatgggagaattctggcaactactccaaatcagcctatcaggccctcttctttggtcgcatccaattccaatcggcaccgatatggaattccctcgcaccaccacgctgccgatacttcctttggttggtagcgctgaatagatgttggactgccgatcgcctccgcagccgcgggctcccacatcctctgtgatgcgtgctttgtgaccaacacgaagaaaccatcgatcacatcttggtcgcttgtccagaatcaaggcaacttggtggtgggcgctgcgcgcgataaggctgcaggattgcctgccaataaacgaagcatccttccatacctggttatgcagcgcaagggagaaggtccacaaaccacatcgtcggggattcgacacaatagcgactctgattgcttggacaatttggaaggaacggaacaatcgagtgttcaacaatgagagcaggacatgggtcgacattgcgaaaggaatggccgaagaagcagcgctctggcgggcggcaaactcggtgattccatccctcacttcgcagctcccaggaggtcgtggtagcacaatagttttgcgagattagctcttattgtttatattccagtatcggtcccgtgctgtttttaaatttgttacttgtaaataaactttattcctcttaatgaaaaaatgtgcgcctcacgtattcctgaaaaaaaaattaaatggtactgcaaatttgttgagcatgtgatatcaagtccagaaatttatttaaggtgtggttttctgcatcttctgatgcagtggccaggatgctatattccattatctaaaactaaggcaattttattgtttgctagacagatagagcatttttttattcctttacttttatgtatatgtgggtttacatgactttttatgagcacagagctttccacttgggtagcgttttgatactctgttagcttgtgacactcaattcttatatgtgctacttaaagtcaggctgataacaataacttcagcggaagttccatccctgctgcatacgaaaacataccaacacttctaaagctgtgagtccaaccttctttctttcacaagttcatgttgtacttttgttcttcttactacttgtagatgcaggggactcgattattttagaaagtacataggccacctttaagtttggatggagaagattaacatggtacataatataattgattaatgtaagcagattccattcgaagtttgatatgttgaggctcacgatgagtagagattcctcactggaaaagacaaaaagaaaacaaaaggagtaaaaatcaatcttcttaccttaacaacctaaggtttagtagatatggttgttgtagacttatatcagaagtccaggaaatacaaaacaacagaatccaatctctatcattcttaaactcagacaaagatatgtgctcagtagatattccttttcactttaccaggagtcttaggaattgcaatttgcaaggaggtattccagatataagtggcattcctcaatttggctatttgtaagtacagatcaaatatatcactcatttcattttattaggggggaagcgcaccattggtgtggtggtttagtcatgggttcatgactccacccagcaaggttcaaatcctaagattggccattcacttcatgaatgagaataatccaggaggttattgtgtacacacctttactaactaactctgtcaagtactttcagggatcttagctggaaccaactgacaggatctataccaactaataaacttgcttcaaacgtcactacaatgtacatcgtcgtttataagagcaatgattttttacttgtatttttccctttaaagaaaagctaatttctagtttttgacagtgacttgtcacataactctcttaatggaactattccatcaagcttttcggggctgcctaatcttcaattcctgtaagtaaatatttaacttgctacatgtttctttcgtgtcaacaatgcttttatatactacacagccaacctgccctggcatcgtaaattaatgctttatctgttgaacttgtgttgtttgttggccagtactgttctgttacttatttgttagaggtatatgattatttttcagatcgattgaaggaaatcacatagatggtgctgttccatcgacaatttggagtaacatcacttttgtgggaaatcgaagccttgttgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0818600, RefSeq:Os01g0818600